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The map label for this gene is yabE [H]

Identifier: 108801228

GI number: 108801228

Start: 4530197

End: 4531324

Strand: Reverse

Name: yabE [H]

Synonym: Mmcs_4264

Alternate gene names: 108801228

Gene position: 4531324-4530197 (Counterclockwise)

Preceding gene: 108801229

Following gene: 108801227

Centisome position: 79.42

GC content: 65.96

Gene sequence:

>1128_bases
TTGACTGCTCTGAACAGGCTGCACGAGGCGCGTTCGCCCATGCTGCGCATCGTCGTGGGCGCACTGCTGGTGGCGTTGAC
CTTCGCCGGCGGTTACGCCGTCGCCGCCCACAAGACCGTGACCCTCTCCGTGGACGGCACCGAGACCACGGTGTCCACCA
TGAAGTCGCGCGTGATCGACGTCGTCGAAGAGAACGGCTTCGACGTCGGTGACCGCGACGACCTCTTCCCGGCCGCTGAC
GCCGAGGTGAGCCAGTCGCAGACCATCGTGCTGCGGCGCAGCAGGCCGCTGGACATCTCCCTCGATGGTCAGCACACCCA
GCAGGTGTGGACCACGGCGTCGACCGTCGACGAGGCGCTGGCGCAGCTGCAGATGACCGACAGCGCCCCCGCCGCCGCAT
CGCGCGCCAGCCGGGTGCCGCTCGGCGGGATGTCGCTACCGGTCGTCACCCCCAAAACCGTCCAGATCGACGACGGCGGG
GCGATCCGCACCGTCCGGCTGGCCGCGCCGAACGTGGGCGGTCTGCTCGAGGCCGCGGGCGCACCGCTGCAGCAGCGCGA
CAAGGTCGTGCCGGCCGCCTCGGCCCCAGTTGTCGACGGGATGCAGATCCAGATAACTCGGATCCGGGTCGAGAAGGTCA
CCGAGCGGCTGCCGCTGGACCCGGCGAACACCCGCATCGAGGACGTCAACCTCAACATGAGCCGCCAGATCGTCGAGAAT
CCGGGGAGTCCCGGTGTTCAGGACGTGACTTTTGCTATCTCGAAGGTCAACGGTGTGGAAACGGGCAGGCTGCCAGTAGC
CAATGTCGTTGTTTCACCTGCAAAGAACGCCGTTTTGCGGGTGGGTGCCAAACCCGGCACCGAGGTGCCCCCGGTGCGCG
CCGGAGGGACGTGGGATGCCCTCGCTCAGTGCGAAGCCGGAGGTAATTGGTCCATCAATACCGGTAACGGTTATTTCGGT
GGGGTCCAATTTGATCAAAACACCTGGGAGCGCAATGGGGGTCTGAGGTATGCTCCGAGGGCAGATCTGGCAACAAGAGA
AGAACAGATCGCGATTGCTGAGGTCACGCGGGCGAGGCAAGGCTGGGGAGCCTGGCCCACGTGTAGTGGAAGGTTGGGGG
CGTCGTGA

Upstream 100 bases:

>100_bases
GTTGATCTCAGTAAAGGAGTTCGTTACCGTCTTGTGATCGTAAGCGGACTTAGCTCCGCTTTTTTTGAAACGTTTGTACC
AATAACAGGGATTCGACCAC

Downstream 100 bases:

>100_bases
CAATCCGACTACTCGGGCGCACCGAGATCCGGCGCCTTGCGAAGGACATCGATTTTCGCCCGCGCAAGTCGTTCGGGCAA
AATTTCGTCCATGACGCCAA

Product: transglycosylase-like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 375; Mature: 374

Protein sequence:

>375_residues
MTALNRLHEARSPMLRIVVGALLVALTFAGGYAVAAHKTVTLSVDGTETTVSTMKSRVIDVVEENGFDVGDRDDLFPAAD
AEVSQSQTIVLRRSRPLDISLDGQHTQQVWTTASTVDEALAQLQMTDSAPAAASRASRVPLGGMSLPVVTPKTVQIDDGG
AIRTVRLAAPNVGGLLEAAGAPLQQRDKVVPAASAPVVDGMQIQITRIRVEKVTERLPLDPANTRIEDVNLNMSRQIVEN
PGSPGVQDVTFAISKVNGVETGRLPVANVVVSPAKNAVLRVGAKPGTEVPPVRAGGTWDALAQCEAGGNWSINTGNGYFG
GVQFDQNTWERNGGLRYAPRADLATREEQIAIAEVTRARQGWGAWPTCSGRLGAS

Sequences:

>Translated_375_residues
MTALNRLHEARSPMLRIVVGALLVALTFAGGYAVAAHKTVTLSVDGTETTVSTMKSRVIDVVEENGFDVGDRDDLFPAAD
AEVSQSQTIVLRRSRPLDISLDGQHTQQVWTTASTVDEALAQLQMTDSAPAAASRASRVPLGGMSLPVVTPKTVQIDDGG
AIRTVRLAAPNVGGLLEAAGAPLQQRDKVVPAASAPVVDGMQIQITRIRVEKVTERLPLDPANTRIEDVNLNMSRQIVEN
PGSPGVQDVTFAISKVNGVETGRLPVANVVVSPAKNAVLRVGAKPGTEVPPVRAGGTWDALAQCEAGGNWSINTGNGYFG
GVQFDQNTWERNGGLRYAPRADLATREEQIAIAEVTRARQGWGAWPTCSGRLGAS
>Mature_374_residues
TALNRLHEARSPMLRIVVGALLVALTFAGGYAVAAHKTVTLSVDGTETTVSTMKSRVIDVVEENGFDVGDRDDLFPAADA
EVSQSQTIVLRRSRPLDISLDGQHTQQVWTTASTVDEALAQLQMTDSAPAAASRASRVPLGGMSLPVVTPKTVQIDDGGA
IRTVRLAAPNVGGLLEAAGAPLQQRDKVVPAASAPVVDGMQIQITRIRVEKVTERLPLDPANTRIEDVNLNMSRQIVENP
GSPGVQDVTFAISKVNGVETGRLPVANVVVSPAKNAVLRVGAKPGTEVPPVRAGGTWDALAQCEAGGNWSINTGNGYFGG
VQFDQNTWERNGGLRYAPRADLATREEQIAIAEVTRARQGWGAWPTCSGRLGAS

Specific function: Unknown

COG id: COG3583

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 G5 domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010611
- InterPro:   IPR014733
- InterPro:   IPR007137
- InterPro:   IPR011098 [H]

Pfam domain/function: PF06725 3D; PF03990 DUF348; PF07501 G5 [H]

EC number: NA

Molecular weight: Translated: 39622; Mature: 39491

Theoretical pI: Translated: 5.85; Mature: 5.85

Prosite motif: PS51109 G5

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTALNRLHEARSPMLRIVVGALLVALTFAGGYAVAAHKTVTLSVDGTETTVSTMKSRVID
CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEEEEEEECCCHHHHHHHHHHHHH
VVEENGFDVGDRDDLFPAADAEVSQSQTIVLRRSRPLDISLDGQHTQQVWTTASTVDEAL
HHHHCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCEEEECCCHHHHHHHHHHHHHHHH
AQLQMTDSAPAAASRASRVPLGGMSLPVVTPKTVQIDDGGAIRTVRLAAPNVGGLLEAAG
HHHCCCCCCCHHHHHCCCCCCCCCCCCEECCCEEEECCCCCEEEEEEECCCCCCHHHHCC
APLQQRDKVVPAASAPVVDGMQIQITRIRVEKVTERLPLDPANTRIEDVNLNMSRQIVEN
CCHHHHCCCCCCCCCCCCCCCEEEEEEEEHHHHHHHCCCCCCCCEEEEECCCHHHHHHCC
PGSPGVQDVTFAISKVNGVETGRLPVANVVVSPAKNAVLRVGAKPGTEVPPVRAGGTWDA
CCCCCHHHHHEEEECCCCCCCCCCCEEHEEECCCCCEEEEECCCCCCCCCCCCCCCCHHH
LAQCEAGGNWSINTGNGYFGGVQFDQNTWERNGGLRYAPRADLATREEQIAIAEVTRARQ
HHHHCCCCCEEEECCCCEECCEEECCCHHHCCCCEEECCCCCCCCCHHHHHHHHHHHHHC
GWGAWPTCSGRLGAS
CCCCCCCCCCCCCCC
>Mature Secondary Structure 
TALNRLHEARSPMLRIVVGALLVALTFAGGYAVAAHKTVTLSVDGTETTVSTMKSRVID
CHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEEEEEEECCCHHHHHHHHHHHHH
VVEENGFDVGDRDDLFPAADAEVSQSQTIVLRRSRPLDISLDGQHTQQVWTTASTVDEAL
HHHHCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCEEEECCCHHHHHHHHHHHHHHHH
AQLQMTDSAPAAASRASRVPLGGMSLPVVTPKTVQIDDGGAIRTVRLAAPNVGGLLEAAG
HHHCCCCCCCHHHHHCCCCCCCCCCCCEECCCEEEECCCCCEEEEEEECCCCCCHHHHCC
APLQQRDKVVPAASAPVVDGMQIQITRIRVEKVTERLPLDPANTRIEDVNLNMSRQIVEN
CCHHHHCCCCCCCCCCCCCCCEEEEEEEEHHHHHHHCCCCCCCCEEEEECCCHHHHHHCC
PGSPGVQDVTFAISKVNGVETGRLPVANVVVSPAKNAVLRVGAKPGTEVPPVRAGGTWDA
CCCCCHHHHHEEEECCCCCCCCCCCEEHEEECCCCCEEEEECCCCCCCCCCCCCCCCHHH
LAQCEAGGNWSINTGNGYFGGVQFDQNTWERNGGLRYAPRADLATREEQIAIAEVTRARQ
HHHHCCCCCEEEECCCCEECCEEECCCHHHCCCCEEECCCCCCCCCHHHHHHHHHHHHHC
GWGAWPTCSGRLGAS
CCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7584024; 9384377 [H]