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The map label for this gene is ybjT [H]

Identifier: 108801037

GI number: 108801037

Start: 4341708

End: 4342856

Strand: Reverse

Name: ybjT [H]

Synonym: Mmcs_4073

Alternate gene names: 108801037

Gene position: 4342856-4341708 (Counterclockwise)

Preceding gene: 108801038

Following gene: 108801036

Centisome position: 76.12

GC content: 70.76

Gene sequence:

>1149_bases
GTGAAAAACGTGCGAGTCCTGGTCACCGGCGCCACGGGATATGTGGGATCCCGCCTGGTCAGCGCCCTGGTCGACGTCGG
CGCCGACGTAGTGGTCGCGAGCCGGACCCCCGACCGGTTGCGCTCCTTTGGGTGGTACGACGATGTGACCTCGGTCGCAC
TCGATGCCCAGCAACCCCAGTCGGTCAAGCAGGCGCTCGCCGACGCGGGACCCGTCGACGTCATCTACTACCTGGTGCAC
GCGATCGGTCAACCGGACTTCCGCGACACCGACAACCGCGCCGCCACCAACGTCGCCGAAGCCGCCCGGGAGGCCGGTGT
CAAACGGATCGTCTACCTCGGCGGCTTCGTCCCCACCGACGAGACGCTCTCCGAGCATCTGGCCGGGCGTGCCGAGGTCG
CCGAGGCGCTCACCGTCCCGGGCGGTCCCGACGTCGTGTGGCTGGGGGCGGCGATCATCATCGGCGCGGGGTCCACGTCG
TTCGAGATGCTGCGCTACGTCGCCGACCGCTTCCTGGTGCTGCCCATGCCCAAGTGGGCGGCCCACCCGATCGACCCGAT
CTCGATCCGCGACGCCCTGCACTACCTGGTGGCGGCCGCTGACATCGACAAGGTGCCCGCGGGCGCCTACGACATCCACG
GCCCGGACACCACCACCTACGGGGAGCTGCTGCAGAAGTACGCCCGGCTGGCCGGCAGGTGGCGCGCCCCGCTGCCCGTG
CGCGGCATCGACACGTCGGTGGTCGCGCAGCTGAGTGGGCTGGTGCTGCCTGTGCCCGGGGGGCTGGCCGGCGACCTCAT
CGAGAGCCTCGACCACCCGATGACCGCGTCAAAGGAGGGGCTGCGCGACTTCGTCGAGGATCCGGCGGGCGGGTTGACCG
GAATCGACGAGGCGATCCGGCGTTCCCTGTCCCCGCAGCGCCCGCGACCGGTCAACCGGCTGGTCGACGTGCACCACCTC
GCCGACACCGATCCGGACTGGGCCGGCGGCGACTACGAACGCATCACGCGGCTGGTGCGGACCGTCACCCCGCCCATCGC
CCGGCCGGCGCTCGGACTGCTCTGTCTGGTCCCCGGACCGGTGGCGGCCGCGATGCGCACCGGCCTGGACACCCTCGTCA
ACCTGGTACCGAAAGGGAATTCGGCATGA

Upstream 100 bases:

>100_bases
CCGTGGCGGCCACGGTTGCCGCCACGGCCGCCGGGGTGTTCGTCGTCAGCAAACGGAGACCGGGGGGTTCCCGTTCGCCC
GACCTGGGTACCTAGACACG

Downstream 100 bases:

>100_bases
CCGAAACCGACCGATCGTCACCGACCCCCGCGCCGTGCGACGAACGGACCGGTTTTCTCCGGGAGGCACGCGGCGTCGTG
ATGAGCGTCGCCGCCCCGGC

Product: NAD-dependent epimerase/dehydratase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 382; Mature: 382

Protein sequence:

>382_residues
MKNVRVLVTGATGYVGSRLVSALVDVGADVVVASRTPDRLRSFGWYDDVTSVALDAQQPQSVKQALADAGPVDVIYYLVH
AIGQPDFRDTDNRAATNVAEAAREAGVKRIVYLGGFVPTDETLSEHLAGRAEVAEALTVPGGPDVVWLGAAIIIGAGSTS
FEMLRYVADRFLVLPMPKWAAHPIDPISIRDALHYLVAAADIDKVPAGAYDIHGPDTTTYGELLQKYARLAGRWRAPLPV
RGIDTSVVAQLSGLVLPVPGGLAGDLIESLDHPMTASKEGLRDFVEDPAGGLTGIDEAIRRSLSPQRPRPVNRLVDVHHL
ADTDPDWAGGDYERITRLVRTVTPPIARPALGLLCLVPGPVAAAMRTGLDTLVNLVPKGNSA

Sequences:

>Translated_382_residues
MKNVRVLVTGATGYVGSRLVSALVDVGADVVVASRTPDRLRSFGWYDDVTSVALDAQQPQSVKQALADAGPVDVIYYLVH
AIGQPDFRDTDNRAATNVAEAAREAGVKRIVYLGGFVPTDETLSEHLAGRAEVAEALTVPGGPDVVWLGAAIIIGAGSTS
FEMLRYVADRFLVLPMPKWAAHPIDPISIRDALHYLVAAADIDKVPAGAYDIHGPDTTTYGELLQKYARLAGRWRAPLPV
RGIDTSVVAQLSGLVLPVPGGLAGDLIESLDHPMTASKEGLRDFVEDPAGGLTGIDEAIRRSLSPQRPRPVNRLVDVHHL
ADTDPDWAGGDYERITRLVRTVTPPIARPALGLLCLVPGPVAAAMRTGLDTLVNLVPKGNSA
>Mature_382_residues
MKNVRVLVTGATGYVGSRLVSALVDVGADVVVASRTPDRLRSFGWYDDVTSVALDAQQPQSVKQALADAGPVDVIYYLVH
AIGQPDFRDTDNRAATNVAEAAREAGVKRIVYLGGFVPTDETLSEHLAGRAEVAEALTVPGGPDVVWLGAAIIIGAGSTS
FEMLRYVADRFLVLPMPKWAAHPIDPISIRDALHYLVAAADIDKVPAGAYDIHGPDTTTYGELLQKYARLAGRWRAPLPV
RGIDTSVVAQLSGLVLPVPGGLAGDLIESLDHPMTASKEGLRDFVEDPAGGLTGIDEAIRRSLSPQRPRPVNRLVDVHHL
ADTDPDWAGGDYERITRLVRTVTPPIARPALGLLCLVPGPVAAAMRTGLDTLVNLVPKGNSA

Specific function: Unknown

COG id: COG0702

COG function: function code MG; Predicted nucleoside-diphosphate-sugar epimerases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI87081793, Length=307, Percent_Identity=31.2703583061889, Blast_Score=139, Evalue=4e-34,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR021295
- InterPro:   IPR001509
- InterPro:   IPR016040 [H]

Pfam domain/function: PF11066 DUF2867; PF01370 Epimerase [H]

EC number: NA

Molecular weight: Translated: 40596; Mature: 40596

Theoretical pI: Translated: 5.40; Mature: 5.40

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKNVRVLVTGATGYVGSRLVSALVDVGADVVVASRTPDRLRSFGWYDDVTSVALDAQQPQ
CCCCEEEEECCCHHHHHHHHHHHHHCCCCEEEECCCHHHHHHCCCHHHHHHHHHCCCCHH
SVKQALADAGPVDVIYYLVHAIGQPDFRDTDNRAATNVAEAAREAGVKRIVYLGGFVPTD
HHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCEEEEECCCCCCH
ETLSEHLAGRAEVAEALTVPGGPDVVWLGAAIIIGAGSTSFEMLRYVADRFLVLPMPKWA
HHHHHHHCCHHHHHHHHCCCCCCCEEEECCCCEEECCCHHHHHHHHHHHCEEEECCCHHH
AHPIDPISIRDALHYLVAAADIDKVPAGAYDIHGPDTTTYGELLQKYARLAGRWRAPLPV
CCCCCCHHHHHHHHHHHHHHHHHCCCCCCEECCCCCCCCHHHHHHHHHHHHCCCCCCCCC
RGIDTSVVAQLSGLVLPVPGGLAGDLIESLDHPMTASKEGLRDFVEDPAGGLTGIDEAIR
CCCCHHHHHHHCCCEEECCCCHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCCCHHHHHHH
RSLSPQRPRPVNRLVDVHHLADTDPDWAGGDYERITRLVRTVTPPIARPALGLLCLVPGP
HCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHEEEECCCH
VAAAMRTGLDTLVNLVPKGNSA
HHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MKNVRVLVTGATGYVGSRLVSALVDVGADVVVASRTPDRLRSFGWYDDVTSVALDAQQPQ
CCCCEEEEECCCHHHHHHHHHHHHHCCCCEEEECCCHHHHHHCCCHHHHHHHHHCCCCHH
SVKQALADAGPVDVIYYLVHAIGQPDFRDTDNRAATNVAEAAREAGVKRIVYLGGFVPTD
HHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCEEEEECCCCCCH
ETLSEHLAGRAEVAEALTVPGGPDVVWLGAAIIIGAGSTSFEMLRYVADRFLVLPMPKWA
HHHHHHHCCHHHHHHHHCCCCCCCEEEECCCCEEECCCHHHHHHHHHHHCEEEECCCHHH
AHPIDPISIRDALHYLVAAADIDKVPAGAYDIHGPDTTTYGELLQKYARLAGRWRAPLPV
CCCCCCHHHHHHHHHHHHHHHHHCCCCCCEECCCCCCCCHHHHHHHHHHHHCCCCCCCCC
RGIDTSVVAQLSGLVLPVPGGLAGDLIESLDHPMTASKEGLRDFVEDPAGGLTGIDEAIR
CCCCHHHHHHHCCCEEECCCCHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCCCHHHHHHH
RSLSPQRPRPVNRLVDVHHLADTDPDWAGGDYERITRLVRTVTPPIARPALGLLCLVPGP
HCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHEEEECCCH
VAAAMRTGLDTLVNLVPKGNSA
HHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503 [H]