| Definition | Mycobacterium sp. MCS chromosome, complete genome. |
|---|---|
| Accession | NC_008146 |
| Length | 5,705,448 |
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The map label for this gene is 108801036
Identifier: 108801036
GI number: 108801036
Start: 4339483
End: 4341711
Strand: Reverse
Name: 108801036
Synonym: Mmcs_4072
Alternate gene names: NA
Gene position: 4341711-4339483 (Counterclockwise)
Preceding gene: 108801037
Following gene: 108801033
Centisome position: 76.1
GC content: 68.95
Gene sequence:
>2229_bases ATGACCGAAACCGACCGATCGTCACCGACCCCCGCGCCGTGCGACGAACGGACCGGTTTTCTCCGGGAGGCACGCGGCGT CGTGATGAGCGTCGCCGCCCCGGCCGGTGAGTGGCCGGCGGTGATCCGTCGTCGCCGGATCATCGTCGCGATCTTCGTCG TGATCGGCTTCGGTCTGCTCGGCTACTCGCTGTCGATCCCGCCGGGGGACCCCGACTTCTACTGGTTCACCGCGGGACTC GCCGTCTTCTGGACCGCGGGCGCGTTCCTCTCCGGCCCACTTCACCTGGGCCGAATCTGTTATCGGAGTCGCAACCAGCG GCCGGTGATCACCGGCACCGTCGTCGGGTTGGCGCTCGGCGGTGCGTTCGTGGTGGCGGCCCTGGTGGCCCGGGAGATCC CTTTGATGGCCGAGTACGCCGTGCGGGTGCTCGAACACGCCAACCAGGGGGCGCTGTGGTTGGTCGTCGTGATCACCGTG GTCAACGGCCTGGCCGAGGAGCTGTTCTTCCGCGGCGCGCTGTACACCTCACTGGGCAACCGCTGGAACGGGTGGTGGGC GGTGCTCTGGTCGACGGCGGTGTACGTCGTGGTGACGGGTGTGAGCACGCAGAACTTCATGCTGGCCATCGCGGCGATCG TGCTCGGCACCGTGTGCGCGCTCGAACGCCGTGCGACGGGGGAGTGCTCGCACCCATGCTCACCCACTTCTTCTGGGGCC TGGTCATGGTGCTCGCACTGCCCCCGATCTTCGGGGTCTGACCCCTCAACCGAGGGGATGGGCGATTTCGTCGCGCGGCA TCCGCGCTGCCGTCACCGCAACCGCGGCGAGCAGCACCGGCGCGATACCCGCGACCATGAAGATGGTCTCCATCGACACG ACCTTCGACAGCGGGCCGACGATCGCGAACGAAACCGGCATGAACGCCAGCGAGACGAAGAAGTCCAGACTGGAGACCCG GCCGAGCATGTCGGTCGGCACCCGGCGCTGCAGCAGCGTCCCCCAGATCACCATGCCGGCACCGTCGGTCACCCCGATCG CGAAGGTGGCCGCGGCCATCACCGGGAACGACGACGTCGTCCCGACGACGACGAGCGGGATCGAGCCCGCCCCCCACATC GTCATCATGACGGTGAGGTAGCGCCGCGGCATCCGCACCGACGAGACGGCAAGGGCGCCAAGCGCACTGCCGACGCCGAA GAACGCGAGGATGAATCCGTAGGCGCGTGCGCCGTCGGCGAAGCGCTGCTGGGCGATGAACGGCAGCAGCACCTCGATCG GTCCGAGCACGACGAGGACGAACATGCTGGCGAACAGCAGCGTCGACAGCAGCCACGGGGTGCGGAGCATGAACCGGAAA CCGTCGCGCAGGTCGTGCAGGACACGTGTGCTCGCGGCCTTCGGCCTGGCGTGCGCCGGGCGCGTCGCGACCAACAGGAG CAGGCCGAGCCCGAACAGGGCGGCGACCACGAGTGCCCCGACCGAGGGCAGCGTGGCGCCGACCACCATGCCGGCGACCG CGGGTCCCACCGACCGCTGGAACACCGGCCGCACCACACCCTCGACGCCGTTGGCGGCGAGCAGCGCTTCGGCGGGCAGG ATGCGCGGGAGGATCGCGCTGTAGGCGGGGAAGAAGAACGCGGCGGCGATGCCGAGGACCCCGGCGGCGACGGCCAGATG CCAAATGCGAAGGGCGTCAATCAATCCCAGTGTGGCGACGATGCCGACGGTCAGGAAGTTCACCGCTTCGACGACGATGA TGATGGCGCGCTGGCTGAAGCGGTCGGCGGCCAGCCCGCCGACGAGGACGAACGCCACCAAGCCGGCGCCGAGGCAGGTG GCGACCAGCGACAGCGCGGCGGGGTCGTTGTCGAGGGCGATGACCTGCAGCGCCATCACGACCGTCCACATGCCCTCGGC GAAGATCGACAGCGAGACCGCCGCCATCAACAGCCGGTACTCGCGGACGGCGAACGGGGCGAGCACGCGCCATCGACCGG CGCCACGCGCTGGCTTCTGGTCGAGGGTCGGCGTACTCATCTCTCGATGGTCGTCGACGGAGTCGGCCTCAGTCCAACGA TTTTCGGGTCAGAAGAGGTCGTCGAGGGACGGCAGCCTGCCGGCGAGTTTGGTGATCGCCCACTGGTTCAGCGACACGCC CTGTTCGGCTGCTTCGACCGAGAGACGGCTGTGCAGATCCGGCGAGGCGCTCGGCGACGCTGTCGCTGA
Upstream 100 bases:
>100_bases CGGCGCTCGGACTGCTCTGTCTGGTCCCCGGACCGGTGGCGGCCGCGATGCGCACCGGCCTGGACACCCTCGTCAACCTG GTACCGAAAGGGAATTCGGC
Downstream 100 bases:
>100_bases TTTCGCGCTCGAGGTTCTCGATGGCTTGTGCCGGGGTGGGGGCGTGGCAGAAGTGGCCGGGGAATTCCAGACACCGAGCC TCGTATTCGCCACGGCGCGG
Product: abortive infection protein
Products: NA
Alternate protein names: Integral Membrane Protein; Caax Amino Protease Family Protein; CAAX Amino Terminal Protease Family Protein
Number of amino acids: Translated: 742; Mature: 741
Protein sequence:
>742_residues MTETDRSSPTPAPCDERTGFLREARGVVMSVAAPAGEWPAVIRRRRIIVAIFVVIGFGLLGYSLSIPPGDPDFYWFTAGL AVFWTAGAFLSGPLHLGRICYRSRNQRPVITGTVVGLALGGAFVVAALVAREIPLMAEYAVRVLEHANQGALWLVVVITV VNGLAEELFFRGALYTSLGNRWNGWWAVLWSTAVYVVVTGVSTQNFMLAIAAIVLGTVCALERRATGECSHPCSPTSSGA WSWCSHCPRSSGSDPSTEGMGDFVARHPRCRHRNRGEQHRRDTRDHEDGLHRHDLRQRADDRERNRHERQRDEEVQTGDP AEHVGRHPALQQRPPDHHAGTVGHPDREGGRGHHRERRRRPDDDERDRARPPHRHHDGEVAPRHPHRRDGKGAKRTADAE EREDESVGACAVGEALLGDERQQHLDRSEHDEDEHAGEQQRRQQPRGAEHEPETVAQVVQDTCARGLRPGVRRARRDQQE QAEPEQGGDHECPDRGQRGADHHAGDRGSHRPLEHRPHHTLDAVGGEQRFGGQDAREDRAVGGEEERGGDAEDPGGDGQM PNAKGVNQSQCGDDADGQEVHRFDDDDDGALAEAVGGQPADEDERHQAGAEAGGDQRQRGGVVVEGDDLQRHHDRPHALG EDRQRDRRHQQPVLADGERGEHAPSTGATRWLLVEGRRTHLSMVVDGVGLSPTIFGSEEVVEGRQPAGEFGDRPLVQRHA LFGCFDRETAVQIRRGARRRCR
Sequences:
>Translated_742_residues MTETDRSSPTPAPCDERTGFLREARGVVMSVAAPAGEWPAVIRRRRIIVAIFVVIGFGLLGYSLSIPPGDPDFYWFTAGL AVFWTAGAFLSGPLHLGRICYRSRNQRPVITGTVVGLALGGAFVVAALVAREIPLMAEYAVRVLEHANQGALWLVVVITV VNGLAEELFFRGALYTSLGNRWNGWWAVLWSTAVYVVVTGVSTQNFMLAIAAIVLGTVCALERRATGECSHPCSPTSSGA WSWCSHCPRSSGSDPSTEGMGDFVARHPRCRHRNRGEQHRRDTRDHEDGLHRHDLRQRADDRERNRHERQRDEEVQTGDP AEHVGRHPALQQRPPDHHAGTVGHPDREGGRGHHRERRRRPDDDERDRARPPHRHHDGEVAPRHPHRRDGKGAKRTADAE EREDESVGACAVGEALLGDERQQHLDRSEHDEDEHAGEQQRRQQPRGAEHEPETVAQVVQDTCARGLRPGVRRARRDQQE QAEPEQGGDHECPDRGQRGADHHAGDRGSHRPLEHRPHHTLDAVGGEQRFGGQDAREDRAVGGEEERGGDAEDPGGDGQM PNAKGVNQSQCGDDADGQEVHRFDDDDDGALAEAVGGQPADEDERHQAGAEAGGDQRQRGGVVVEGDDLQRHHDRPHALG EDRQRDRRHQQPVLADGERGEHAPSTGATRWLLVEGRRTHLSMVVDGVGLSPTIFGSEEVVEGRQPAGEFGDRPLVQRHA LFGCFDRETAVQIRRGARRRCR >Mature_741_residues TETDRSSPTPAPCDERTGFLREARGVVMSVAAPAGEWPAVIRRRRIIVAIFVVIGFGLLGYSLSIPPGDPDFYWFTAGLA VFWTAGAFLSGPLHLGRICYRSRNQRPVITGTVVGLALGGAFVVAALVAREIPLMAEYAVRVLEHANQGALWLVVVITVV NGLAEELFFRGALYTSLGNRWNGWWAVLWSTAVYVVVTGVSTQNFMLAIAAIVLGTVCALERRATGECSHPCSPTSSGAW SWCSHCPRSSGSDPSTEGMGDFVARHPRCRHRNRGEQHRRDTRDHEDGLHRHDLRQRADDRERNRHERQRDEEVQTGDPA EHVGRHPALQQRPPDHHAGTVGHPDREGGRGHHRERRRRPDDDERDRARPPHRHHDGEVAPRHPHRRDGKGAKRTADAEE REDESVGACAVGEALLGDERQQHLDRSEHDEDEHAGEQQRRQQPRGAEHEPETVAQVVQDTCARGLRPGVRRARRDQQEQ AEPEQGGDHECPDRGQRGADHHAGDRGSHRPLEHRPHHTLDAVGGEQRFGGQDAREDRAVGGEEERGGDAEDPGGDGQMP NAKGVNQSQCGDDADGQEVHRFDDDDDGALAEAVGGQPADEDERHQAGAEAGGDQRQRGGVVVEGDDLQRHHDRPHALGE DRQRDRRHQQPVLADGERGEHAPSTGATRWLLVEGRRTHLSMVVDGVGLSPTIFGSEEVVEGRQPAGEFGDRPLVQRHAL FGCFDRETAVQIRRGARRRCR
Specific function: Unknown
COG id: COG1266
COG function: function code R; Predicted metal-dependent membrane protease
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 82113; Mature: 81982
Theoretical pI: Translated: 6.49; Mature: 6.49
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTETDRSSPTPAPCDERTGFLREARGVVMSVAAPAGEWPAVIRRRRIIVAIFVVIGFGLL CCCCCCCCCCCCCCHHHHHHHHHHCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHH GYSLSIPPGDPDFYWFTAGLAVFWTAGAFLSGPLHLGRICYRSRNQRPVITGTVVGLALG HCEEECCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCEEHHHHHHHHHH GAFVVAALVAREIPLMAEYAVRVLEHANQGALWLVVVITVVNGLAEELFFRGALYTSLGN HHHHHHHHHHHHCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC RWNGWWAVLWSTAVYVVVTGVSTQNFMLAIAAIVLGTVCALERRATGECSHPCSPTSSGA CCCHHHHHHHHHHHEEEEECCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC WSWCSHCPRSSGSDPSTEGMGDFVARHPRCRHRNRGEQHRRDTRDHEDGLHRHDLRQRAD HHHHHHCCCCCCCCCCCCCHHHHHHCCCCHHHCCCCHHHHHHCCHHHCCHHHHHHHHHHH DRERNRHERQRDEEVQTGDPAEHVGRHPALQQRPPDHHAGTVGHPDREGGRGHHRERRRR HHHHHHHHHHHHHHHCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCC PDDDERDRARPPHRHHDGEVAPRHPHRRDGKGAKRTADAEEREDESVGACAVGEALLGDE CCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCHHHHHHHHHCCH RQQHLDRSEHDEDEHAGEQQRRQQPRGAEHEPETVAQVVQDTCARGLRPGVRRARRDQQE HHHHCCCCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHH QAEPEQGGDHECPDRGQRGADHHAGDRGSHRPLEHRPHHTLDAVGGEQRFGGQDAREDRA HCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCHHCCCCCCHHHHC VGGEEERGGDAEDPGGDGQMPNAKGVNQSQCGDDADGQEVHRFDDDDDGALAEAVGGQPA CCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCHHHHCCCCCCCCHHHHHHCCCCC DEDERHQAGAEAGGDQRQRGGVVVEGDDLQRHHDRPHALGEDRQRDRRHQQPVLADGERG CHHHHHHHCCCCCCCHHHHCCEEEECCHHHHHCCCCCCCCCHHHHHHHHCCCCCCCCCCC EHAPSTGATRWLLVEGRRTHLSMVVDGVGLSPTIFGSEEVVEGRQPAGEFGDRPLVQRHA CCCCCCCCCEEEEECCCHHEEHHHHCCCCCCCEECCCHHHHCCCCCCHHCCCCHHHHHHH LFGCFDRETAVQIRRGARRRCR HHHHHCHHHHHHHHHHHHHCCC >Mature Secondary Structure TETDRSSPTPAPCDERTGFLREARGVVMSVAAPAGEWPAVIRRRRIIVAIFVVIGFGLL CCCCCCCCCCCCCHHHHHHHHHHCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHH GYSLSIPPGDPDFYWFTAGLAVFWTAGAFLSGPLHLGRICYRSRNQRPVITGTVVGLALG HCEEECCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCEEHHHHHHHHHH GAFVVAALVAREIPLMAEYAVRVLEHANQGALWLVVVITVVNGLAEELFFRGALYTSLGN HHHHHHHHHHHHCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC RWNGWWAVLWSTAVYVVVTGVSTQNFMLAIAAIVLGTVCALERRATGECSHPCSPTSSGA CCCHHHHHHHHHHHEEEEECCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC WSWCSHCPRSSGSDPSTEGMGDFVARHPRCRHRNRGEQHRRDTRDHEDGLHRHDLRQRAD HHHHHHCCCCCCCCCCCCCHHHHHHCCCCHHHCCCCHHHHHHCCHHHCCHHHHHHHHHHH DRERNRHERQRDEEVQTGDPAEHVGRHPALQQRPPDHHAGTVGHPDREGGRGHHRERRRR HHHHHHHHHHHHHHHCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCC PDDDERDRARPPHRHHDGEVAPRHPHRRDGKGAKRTADAEEREDESVGACAVGEALLGDE CCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCHHHHHHHHHCCH RQQHLDRSEHDEDEHAGEQQRRQQPRGAEHEPETVAQVVQDTCARGLRPGVRRARRDQQE HHHHCCCCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHH QAEPEQGGDHECPDRGQRGADHHAGDRGSHRPLEHRPHHTLDAVGGEQRFGGQDAREDRA HCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCHHCCCCCCHHHHC VGGEEERGGDAEDPGGDGQMPNAKGVNQSQCGDDADGQEVHRFDDDDDGALAEAVGGQPA CCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCHHHHCCCCCCCCHHHHHHCCCCC DEDERHQAGAEAGGDQRQRGGVVVEGDDLQRHHDRPHALGEDRQRDRRHQQPVLADGERG CHHHHHHHCCCCCCCHHHHCCEEEECCHHHHHCCCCCCCCCHHHHHHHHCCCCCCCCCCC EHAPSTGATRWLLVEGRRTHLSMVVDGVGLSPTIFGSEEVVEGRQPAGEFGDRPLVQRHA CCCCCCCCCEEEEECCCHHEEHHHHCCCCCCCEECCCHHHHCCCCCCHHCCCCHHHHHHH LFGCFDRETAVQIRRGARRRCR HHHHHCHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA