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The map label for this gene is uidR [C]

Identifier: 108800189

GI number: 108800189

Start: 3414290

End: 3414976

Strand: Reverse

Name: uidR [C]

Synonym: Mmcs_3223

Alternate gene names: 108800189

Gene position: 3414976-3414290 (Counterclockwise)

Preceding gene: 108800193

Following gene: 108800188

Centisome position: 59.85

GC content: 64.77

Gene sequence:

>687_bases
ATGGTGTCATGTGCGTGGGCAAGTCACAATGGTGTGCGCTCGCGGCATACTGGCTGTGTGTCGACGAGGTTGTTGAGATG
GGGCGCCGCCGCGCCGACAGATCGTGGGTCCGCTCGCGACCGGTTGCTCGATGCTGCCGAGCGGTGCCTCGAGAGTTGCG
GTGTGGTGGGCACGACCATGGAGGACATCGGCAGAACAGCGGGTGTGTCCAGGGCAACGGTGTATCGCTACTTCCCCAGT
CGGGAGGCGGTGATGTCGGGTGTCATCATTCGCGCCGCCGAGCGCTATCTCGACCGCATCAGCCCGCGGATCGCGGCGCA
CGCCGACCTGGGCTCCGCGCTCGTCGATTTCGTGGAATACACGGTTGAGGCCGCGCGCCGCGAAGAGATCATCGGATTGT
TGTTCGGCAGCGACGAGGAACTCGCCGGCGTGGGTCTCGCGGCGGGGACCTCGACGTCCCTCTTCGAAATCGTCACCGAA
TTTCTGCGTCCCATCTTCACCAGACACTGGAGTTGCGTGGAACCGGGCGTCTCCGTCGACGACGCCGCCGAGTGGGTTGT
CCGCACGATATTGAGCCTGCTGACTGTTCGAGGGCCGCGGGAGCGCAGTCGTGACGGACTCCGGGCGTTTCTGTCGAGGT
TTCTCCTTCCGGCGATCCTGGCGGGTGACCACGCTCGACCGATGTGA

Upstream 100 bases:

>100_bases
TAACTTCGCCCACGCCGACGACAACCGGGGTACGCGCTTCTACCAACATCGGCATCGGCATCCGCTCAGGGCCACGGGGC
TGACTTGAGACATAACTGCG

Downstream 100 bases:

>100_bases
CATCTATGGCGTAATGTCTCGACGGCAGATGAGGTAGGAGGGCCTGTGCAATTCACCACGTTCAACGAACAGGTCGCTGA
GCAACTAAAGAGCGCAGCAG

Product: TetR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 228; Mature: 228

Protein sequence:

>228_residues
MVSCAWASHNGVRSRHTGCVSTRLLRWGAAAPTDRGSARDRLLDAAERCLESCGVVGTTMEDIGRTAGVSRATVYRYFPS
REAVMSGVIIRAAERYLDRISPRIAAHADLGSALVDFVEYTVEAARREEIIGLLFGSDEELAGVGLAAGTSTSLFEIVTE
FLRPIFTRHWSCVEPGVSVDDAAEWVVRTILSLLTVRGPRERSRDGLRAFLSRFLLPAILAGDHARPM

Sequences:

>Translated_228_residues
MVSCAWASHNGVRSRHTGCVSTRLLRWGAAAPTDRGSARDRLLDAAERCLESCGVVGTTMEDIGRTAGVSRATVYRYFPS
REAVMSGVIIRAAERYLDRISPRIAAHADLGSALVDFVEYTVEAARREEIIGLLFGSDEELAGVGLAAGTSTSLFEIVTE
FLRPIFTRHWSCVEPGVSVDDAAEWVVRTILSLLTVRGPRERSRDGLRAFLSRFLLPAILAGDHARPM
>Mature_228_residues
MVSCAWASHNGVRSRHTGCVSTRLLRWGAAAPTDRGSARDRLLDAAERCLESCGVVGTTMEDIGRTAGVSRATVYRYFPS
REAVMSGVIIRAAERYLDRISPRIAAHADLGSALVDFVEYTVEAARREEIIGLLFGSDEELAGVGLAAGTSTSLFEIVTE
FLRPIFTRHWSCVEPGVSVDDAAEWVVRTILSLLTVRGPRERSRDGLRAFLSRFLLPAILAGDHARPM

Specific function: Repressor For The Uidrabc (Gusrabc) Operon. [C]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH tetR-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009057
- InterPro:   IPR015893
- InterPro:   IPR001647 [H]

Pfam domain/function: PF00440 TetR_N [H]

EC number: NA

Molecular weight: Translated: 24892; Mature: 24892

Theoretical pI: Translated: 7.46; Mature: 7.46

Prosite motif: PS50977 HTH_TETR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVSCAWASHNGVRSRHTGCVSTRLLRWGAAAPTDRGSARDRLLDAAERCLESCGVVGTTM
CCEECCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCH
EDIGRTAGVSRATVYRYFPSREAVMSGVIIRAAERYLDRISPRIAAHADLGSALVDFVEY
HHHHHHCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHH
TVEAARREEIIGLLFGSDEELAGVGLAAGTSTSLFEIVTEFLRPIFTRHWSCVEPGVSVD
HHHHHHHHHHHHHEECCCCCHHCCEECCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHH
DAAEWVVRTILSLLTVRGPRERSRDGLRAFLSRFLLPAILAGDHARPM
HHHHHHHHHHHHHHHCCCCHHCCHHHHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MVSCAWASHNGVRSRHTGCVSTRLLRWGAAAPTDRGSARDRLLDAAERCLESCGVVGTTM
CCEECCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCH
EDIGRTAGVSRATVYRYFPSREAVMSGVIIRAAERYLDRISPRIAAHADLGSALVDFVEY
HHHHHHCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHH
TVEAARREEIIGLLFGSDEELAGVGLAAGTSTSLFEIVTEFLRPIFTRHWSCVEPGVSVD
HHHHHHHHHHHHHEECCCCCHHCCEECCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHH
DAAEWVVRTILSLLTVRGPRERSRDGLRAFLSRFLLPAILAGDHARPM
HHHHHHHHHHHHHHHCCCCHHCCHHHHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]