| Definition | Mycobacterium sp. MCS chromosome, complete genome. |
|---|---|
| Accession | NC_008146 |
| Length | 5,705,448 |
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The map label for this gene is 108800193
Identifier: 108800193
GI number: 108800193
Start: 3418403
End: 3419773
Strand: Reverse
Name: 108800193
Synonym: Mmcs_3227
Alternate gene names: NA
Gene position: 3419773-3418403 (Counterclockwise)
Preceding gene: 108800195
Following gene: 108800189
Centisome position: 59.94
GC content: 67.32
Gene sequence:
>1371_bases ATGTGCGCTCAGTCGTTCTGGCGTTCCTGCTGTGAGTTTGCGGAATCGGGCATCGCTGCGGGCTACCGCGCAGTAGTTTG CGTTTCCGTCGGCCGTCCTTTCGATGGAAAGAAGTTTGCAATGCACACAGCTGCTCGTTCGTATCTGACCACCGGTGTGG CGTTGGTGGGAGCCGGCGCCATCGCGATCAGCCCCGTCGCGCCGCCGCTGTCGGACGCCGCCCGCGCCGCGACATCGAGC CTCACGACATCAGATCTGCAGCTGTCCGCCCTGGCGAATCCCTTCATCGTCTACGGCGAAGTGGTCGAGAACACGCTGAC GAACCTCGGTCTGCTCGGCGAGCGGGTGTTGGCCGACCCCGCGCCCATTCTGGCCCAGATCCTGCAGAACCAGTGGAACA GCGCGCAGACGCTGGGCGGCGCCCTGGACCGGGCGGGCGAAAATCTCGCCAACTCGTTCTCTGCCGACAATCCGTTCGGC GTGCCGGCACTGCTTCGCGCGGCCGGCGACCACCTGGCGGCGGGTGACCTGGAGGGTGCGATCAACAGCCTGTGGCAGGT GGTGATCACGCCGCTGCTCGGCCCGGCCATCGAACTCATCCCGGCGATCACCTCGGTGATCCGGCAGCCGGTGCAGAACA TGCTCAACGTGATCGACCAGACCCAGCTGCCGATCACCTTGTTCGCGATCGGCGTGCTGAGCCCGATCTACGCCGGTTTC GTGAAGGCAGGGGGCGCGTTCGTTCAAGACGTCTTCGATGCGGCGCGCACCGGTGACCTCGAAGGGCTCGCGAACGCGTT CATCACCGGACCCGCCGCGGTGATCAACGGATTCCTCAACGGCGACGCCGTCGATGCCGGCTTCTTCAGCCCCGGTCTGG GCGCGATCAGCGGCCTGCTCAACATCCGCGATGCCATTGCCCAGGCGCTCCGGCCGGTGCAGACGGCCGGAATCGCGGCG ATCGATTCGACGACCACCGACGCGACCGCCAGGACCGTATCGGTGAGTGTGGAGTCGTCGGAGGAACCCGGCACATCGGA AACGGCACTCGCGCAGGAGGAGTCGACCAAGAGCGAGGGCGCGTCGGAGCCGGCCGATGCGACGGCCGAGACGGACCCGC TCGACGACACACTTGTCGACGATGTGCCAGTGGAGGAGGCGCCCGTCCAGGACGACGTGACCGACGTGACCGACGTGACC GACGTGACCGACGTAACCGACGATGAGGAGTCACTGACCGACGACGAGGAGGCGTCGCCGGCCCAGGACGAGTCCGAGAA CACCTCCGAGGAAGCGGGCGACGCCGGAGCCGGCGCCGACGAGCCCGGTTCGGGCGACGCGCCGAGCGCGGACGCCGAGG CCACCGAGTAG
Upstream 100 bases:
>100_bases GATCCGATGGTCGAGTTTGCGAGACAGGTTCCGACATTTGTTTGCCAGTCCAAGATCGCCTGCGCTGGAGGGCTTTCAGC GGCAACGGGTCGAGGCGCCG
Downstream 100 bases:
>100_bases TCGTCCCGGAAAGCCACTCCGGGAAAGCCAAGGGCCCCGGCTTCATCGAAGCCGGGGCCCATCGGTTCACACCGGTGTCC GAGGGGGGACTTGTCCGTCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 456; Mature: 456
Protein sequence:
>456_residues MCAQSFWRSCCEFAESGIAAGYRAVVCVSVGRPFDGKKFAMHTAARSYLTTGVALVGAGAIAISPVAPPLSDAARAATSS LTTSDLQLSALANPFIVYGEVVENTLTNLGLLGERVLADPAPILAQILQNQWNSAQTLGGALDRAGENLANSFSADNPFG VPALLRAAGDHLAAGDLEGAINSLWQVVITPLLGPAIELIPAITSVIRQPVQNMLNVIDQTQLPITLFAIGVLSPIYAGF VKAGGAFVQDVFDAARTGDLEGLANAFITGPAAVINGFLNGDAVDAGFFSPGLGAISGLLNIRDAIAQALRPVQTAGIAA IDSTTTDATARTVSVSVESSEEPGTSETALAQEESTKSEGASEPADATAETDPLDDTLVDDVPVEEAPVQDDVTDVTDVT DVTDVTDDEESLTDDEEASPAQDESENTSEEAGDAGAGADEPGSGDAPSADAEATE
Sequences:
>Translated_456_residues MCAQSFWRSCCEFAESGIAAGYRAVVCVSVGRPFDGKKFAMHTAARSYLTTGVALVGAGAIAISPVAPPLSDAARAATSS LTTSDLQLSALANPFIVYGEVVENTLTNLGLLGERVLADPAPILAQILQNQWNSAQTLGGALDRAGENLANSFSADNPFG VPALLRAAGDHLAAGDLEGAINSLWQVVITPLLGPAIELIPAITSVIRQPVQNMLNVIDQTQLPITLFAIGVLSPIYAGF VKAGGAFVQDVFDAARTGDLEGLANAFITGPAAVINGFLNGDAVDAGFFSPGLGAISGLLNIRDAIAQALRPVQTAGIAA IDSTTTDATARTVSVSVESSEEPGTSETALAQEESTKSEGASEPADATAETDPLDDTLVDDVPVEEAPVQDDVTDVTDVT DVTDVTDDEESLTDDEEASPAQDESENTSEEAGDAGAGADEPGSGDAPSADAEATE >Mature_456_residues MCAQSFWRSCCEFAESGIAAGYRAVVCVSVGRPFDGKKFAMHTAARSYLTTGVALVGAGAIAISPVAPPLSDAARAATSS LTTSDLQLSALANPFIVYGEVVENTLTNLGLLGERVLADPAPILAQILQNQWNSAQTLGGALDRAGENLANSFSADNPFG VPALLRAAGDHLAAGDLEGAINSLWQVVITPLLGPAIELIPAITSVIRQPVQNMLNVIDQTQLPITLFAIGVLSPIYAGF VKAGGAFVQDVFDAARTGDLEGLANAFITGPAAVINGFLNGDAVDAGFFSPGLGAISGLLNIRDAIAQALRPVQTAGIAA IDSTTTDATARTVSVSVESSEEPGTSETALAQEESTKSEGASEPADATAETDPLDDTLVDDVPVEEAPVQDDVTDVTDVT DVTDVTDDEESLTDDEEASPAQDESENTSEEAGDAGAGADEPGSGDAPSADAEATE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 46576; Mature: 46576
Theoretical pI: Translated: 3.58; Mature: 3.58
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MCAQSFWRSCCEFAESGIAAGYRAVVCVSVGRPFDGKKFAMHTAARSYLTTGVALVGAGA CCHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHCCC IAISPVAPPLSDAARAATSSLTTSDLQLSALANPFIVYGEVVENTLTNLGLLGERVLADP EEECCCCCCHHHHHHHHHHCCCCCCCHHHHHCCCCEEEHHHHHHHHHHHHHHHHHHHCCC APILAQILQNQWNSAQTLGGALDRAGENLANSFSADNPFGVPALLRAAGDHLAAGDLEGA HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHCCCCCCCCHHHHH INSLWQVVITPLLGPAIELIPAITSVIRQPVQNMLNVIDQTQLPITLFAIGVLSPIYAGF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH VKAGGAFVQDVFDAARTGDLEGLANAFITGPAAVINGFLNGDAVDAGFFSPGLGAISGLL HHHCHHHHHHHHHHHHCCCHHHHHHHHHCCHHHHHHHHCCCCCCCCCCCCCCHHHHHHHH NIRDAIAQALRPVQTAGIAAIDSTTTDATARTVSVSVESSEEPGTSETALAQEESTKSEG HHHHHHHHHHHHHHHHCEEEECCCCCCCCEEEEEEEEECCCCCCCCHHHHHHHHHHHHCC ASEPADATAETDPLDDTLVDDVPVEEAPVQDDVTDVTDVTDVTDVTDDEESLTDDEEASP CCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCHHHHHHHHHHCCCCCHHHCCCCCCCCC AQDESENTSEEAGDAGAGADEPGSGDAPSADAEATE CCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MCAQSFWRSCCEFAESGIAAGYRAVVCVSVGRPFDGKKFAMHTAARSYLTTGVALVGAGA CCHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHCCC IAISPVAPPLSDAARAATSSLTTSDLQLSALANPFIVYGEVVENTLTNLGLLGERVLADP EEECCCCCCHHHHHHHHHHCCCCCCCHHHHHCCCCEEEHHHHHHHHHHHHHHHHHHHCCC APILAQILQNQWNSAQTLGGALDRAGENLANSFSADNPFGVPALLRAAGDHLAAGDLEGA HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHCCCCCCCCHHHHH INSLWQVVITPLLGPAIELIPAITSVIRQPVQNMLNVIDQTQLPITLFAIGVLSPIYAGF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH VKAGGAFVQDVFDAARTGDLEGLANAFITGPAAVINGFLNGDAVDAGFFSPGLGAISGLL HHHCHHHHHHHHHHHHCCCHHHHHHHHHCCHHHHHHHHCCCCCCCCCCCCCCHHHHHHHH NIRDAIAQALRPVQTAGIAAIDSTTTDATARTVSVSVESSEEPGTSETALAQEESTKSEG HHHHHHHHHHHHHHHHCEEEECCCCCCCCEEEEEEEEECCCCCCCCHHHHHHHHHHHHCC ASEPADATAETDPLDDTLVDDVPVEEAPVQDDVTDVTDVTDVTDVTDDEESLTDDEEASP CCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCHHHHHHHHHHCCCCCHHHCCCCCCCCC AQDESENTSEEAGDAGAGADEPGSGDAPSADAEATE CCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA