| Definition | Myxococcus xanthus DK 1622 chromosome, complete genome. |
|---|---|
| Accession | NC_008095 |
| Length | 9,139,763 |
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The map label for this gene is afsK [H]
Identifier: 108763949
GI number: 108763949
Start: 1758108
End: 1759181
Strand: Direct
Name: afsK [H]
Synonym: MXAN_1497
Alternate gene names: 108763949
Gene position: 1758108-1759181 (Clockwise)
Preceding gene: 108763147
Following gene: 108758366
Centisome position: 19.24
GC content: 66.29
Gene sequence:
>1074_bases ATGTCGGATTCATCTCGCTCCGTATTCTTTGGCGCCAATGCTGCGCGGACCGGACACTTCGAGGGAACGGGGCCGCTCGT GGTCAAGCGAGCCCGCTGGAAGTTCAAGCCGGGCACGCTTGCGACCACACGCAACACGCCTGCAATCCACGATGGCGTGC TGTTCGCGAACTTCGACAATGACAAGCTCTACGCGCTTGACCTCGCGAAGGGAAAAGAGCTCTGGAGCGTGCGGGTCGGG GGGCGCGTTTCTGAGAGCATCTCGAATCCGATGGTTGCGCATGGTTTGCTCTTCGTCGTCGGTGGCGGGCAGTGTCACGC CGTCGATCTTGGCACGCACGCCATCCGCTGGAGCGTCTCGTGTGACTCCGAGGCGACCTCCTCGCCAATCGTTGTCGACG ACGACGTCTACGTGGGAGCGCGGCTCGGTGGGGTGGTCGCCATCGACGCGCGTACGGGAGTAGAGCGATGGCGCGTGCAG CTACGCTGTGGTGAGAGTGTGGGGTCCGCGGTCAGCGTGACGCGCGATCAGGTCGTCGTCGGGACCAGACGCGACTTCGT CGAGGGCCACGTCGTCGCGCTCGACCGCGCCACGGGGGGCGAGCGATGGTCGGCGAAGGCCGGTGCGATGGCCAACGGCG GAGCGCCCGCGATCGAAGGCAGCACGGTTTATGCCCTGTCCGGTCTGGGGCAGTGCCTTCGCGCGCTCGACCTCGCCAGT GGCAAAGAGCGTTGGTTGTATGAGACGGGCGGCGCGCTGTGGGGAACGCCCGCCGTTGCGGACGGCGTCGTGTGCTTCAC CGGCTATCACGGGATTCTCCACGCGCTGGACCAAGATACCGGGAAAGAGATTTGGTCGGTCGCGCTCGACAATCCCCCGA AGGATACGGTCTCACCGACGATCGCAGGTGGCGTCGTCTACATGGGGGCCGGCAACGTCGTCCACGCCTGGACGCTCCGG GAGGGAACAGAGCGCTGGCGGTGGAAGGCTCCCTACCGCGTGTCGACGGCACCGCTCGTCGCCGACGGCACGGTCTACGT GGGCTGTGACCGCGCGATCGTCGCGCTGGGGTAG
Upstream 100 bases:
>100_bases TGCAGCCAACTTGAAGGCGACTGGTCCGAGGTGCCTCCGCTTCCAGACGAGGGTCGTCGCGACGAACGCCATCTGCCGGG CTACTAAAAGGGATCTACCC
Downstream 100 bases:
>100_bases CGTCGGCCACCCGGCTTCCACATGGCTCGTAGGCCCAGGCCCCTGCCGCGCCTCAACATGGCCTCTATCCCGTCTATACG CACGAGACACGCCTGAACAG
Product: PQQ repeat-containing protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 357; Mature: 356
Protein sequence:
>357_residues MSDSSRSVFFGANAARTGHFEGTGPLVVKRARWKFKPGTLATTRNTPAIHDGVLFANFDNDKLYALDLAKGKELWSVRVG GRVSESISNPMVAHGLLFVVGGGQCHAVDLGTHAIRWSVSCDSEATSSPIVVDDDVYVGARLGGVVAIDARTGVERWRVQ LRCGESVGSAVSVTRDQVVVGTRRDFVEGHVVALDRATGGERWSAKAGAMANGGAPAIEGSTVYALSGLGQCLRALDLAS GKERWLYETGGALWGTPAVADGVVCFTGYHGILHALDQDTGKEIWSVALDNPPKDTVSPTIAGGVVYMGAGNVVHAWTLR EGTERWRWKAPYRVSTAPLVADGTVYVGCDRAIVALG
Sequences:
>Translated_357_residues MSDSSRSVFFGANAARTGHFEGTGPLVVKRARWKFKPGTLATTRNTPAIHDGVLFANFDNDKLYALDLAKGKELWSVRVG GRVSESISNPMVAHGLLFVVGGGQCHAVDLGTHAIRWSVSCDSEATSSPIVVDDDVYVGARLGGVVAIDARTGVERWRVQ LRCGESVGSAVSVTRDQVVVGTRRDFVEGHVVALDRATGGERWSAKAGAMANGGAPAIEGSTVYALSGLGQCLRALDLAS GKERWLYETGGALWGTPAVADGVVCFTGYHGILHALDQDTGKEIWSVALDNPPKDTVSPTIAGGVVYMGAGNVVHAWTLR EGTERWRWKAPYRVSTAPLVADGTVYVGCDRAIVALG >Mature_356_residues SDSSRSVFFGANAARTGHFEGTGPLVVKRARWKFKPGTLATTRNTPAIHDGVLFANFDNDKLYALDLAKGKELWSVRVGG RVSESISNPMVAHGLLFVVGGGQCHAVDLGTHAIRWSVSCDSEATSSPIVVDDDVYVGARLGGVVAIDARTGVERWRVQL RCGESVGSAVSVTRDQVVVGTRRDFVEGHVVALDRATGGERWSAKAGAMANGGAPAIEGSTVYALSGLGQCLRALDLASG KERWLYETGGALWGTPAVADGVVCFTGYHGILHALDQDTGKEIWSVALDNPPKDTVSPTIAGGVVYMGAGNVVHAWTLRE GTERWRWKAPYRVSTAPLVADGTVYVGCDRAIVALG
Specific function: Involved in the regulation of secondary metabolism by phosphorylating, on both Ser and Thr, the AfsR global regulatory protein involved in the control of secondary metabolism [H]
COG id: COG1520
COG function: function code S; FOG: WD40-like repeat
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 protein kinase domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011009 - InterPro: IPR018391 - InterPro: IPR002372 - InterPro: IPR000719 - InterPro: IPR017441 - InterPro: IPR011047 - InterPro: IPR017442 - InterPro: IPR008271 [H]
Pfam domain/function: PF00069 Pkinase; PF01011 PQQ [H]
EC number: =2.7.11.1 [H]
Molecular weight: Translated: 37750; Mature: 37619
Theoretical pI: Translated: 7.56; Mature: 7.56
Prosite motif: PS00626 RCC1_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDSSRSVFFGANAARTGHFEGTGPLVVKRARWKFKPGTLATTRNTPAIHDGVLFANFDN CCCCCCEEEEECCCCCCCCCCCCCCEEEEECCEEECCCCEEECCCCCCEECCEEEEECCC DKLYALDLAKGKELWSVRVGGRVSESISNPMVAHGLLFVVGGGQCHAVDLGTHAIRWSVS CEEEEEEECCCCEEEEEEECCEEHHHHCCCCEECEEEEEEECCEEEEEECCCEEEEEEEE CDSEATSSPIVVDDDVYVGARLGGVVAIDARTGVERWRVQLRCGESVGSAVSVTRDQVVV CCCCCCCCCEEEECCEEEEEECCCEEEEECCCCCCCEEEEEEECCCCCCEEEEECCEEEE GTRRDFVEGHVVALDRATGGERWSAKAGAMANGGAPAIEGSTVYALSGLGQCLRALDLAS ECCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCEEEEHHHHHHHHHHHHCCC GKERWLYETGGALWGTPAVADGVVCFTGYHGILHALDQDTGKEIWSVALDNPPKDTVSPT CCCCEEEECCCCEECCCCHHCCEEEEECHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCE IAGGVVYMGAGNVVHAWTLREGTERWRWKAPYRVSTAPLVADGTVYVGCDRAIVALG ECCCEEEEECCCEEEEEEECCCCHHCEECCCEEECCCCEEECCEEEEECCEEEEEEC >Mature Secondary Structure SDSSRSVFFGANAARTGHFEGTGPLVVKRARWKFKPGTLATTRNTPAIHDGVLFANFDN CCCCCEEEEECCCCCCCCCCCCCCEEEEECCEEECCCCEEECCCCCCEECCEEEEECCC DKLYALDLAKGKELWSVRVGGRVSESISNPMVAHGLLFVVGGGQCHAVDLGTHAIRWSVS CEEEEEEECCCCEEEEEEECCEEHHHHCCCCEECEEEEEEECCEEEEEECCCEEEEEEEE CDSEATSSPIVVDDDVYVGARLGGVVAIDARTGVERWRVQLRCGESVGSAVSVTRDQVVV CCCCCCCCCEEEECCEEEEEECCCEEEEECCCCCCCEEEEEEECCCCCCEEEEECCEEEE GTRRDFVEGHVVALDRATGGERWSAKAGAMANGGAPAIEGSTVYALSGLGQCLRALDLAS ECCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCEEEEHHHHHHHHHHHHCCC GKERWLYETGGALWGTPAVADGVVCFTGYHGILHALDQDTGKEIWSVALDNPPKDTVSPT CCCCEEEECCCCEECCCCHHCCEEEEECHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCE IAGGVVYMGAGNVVHAWTLREGTERWRWKAPYRVSTAPLVADGTVYVGCDRAIVALG ECCCEEEEECCCEEEEEEECCCCHHCEECCCEEECCCCEEECCEEEEECCEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8063104; 8635757; 12000953 [H]