Definition Myxococcus xanthus DK 1622 chromosome, complete genome.
Accession NC_008095
Length 9,139,763

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The map label for this gene is mdoD [H]

Identifier: 108763699

GI number: 108763699

Start: 2772594

End: 2774183

Strand: Reverse

Name: mdoD [H]

Synonym: MXAN_2385

Alternate gene names: 108763699

Gene position: 2774183-2772594 (Counterclockwise)

Preceding gene: 108757873

Following gene: 108757938

Centisome position: 30.35

GC content: 70.44

Gene sequence:

>1590_bases
GTGACGTCGTTGCGGCAGAAAGCGTTGAAGCTGGGTGCGCCGTGGCTGTGTGCCATGGCGGTGGCGTCGAGCGGCGCCGC
CGTGGCGGCTCCGCCGGCCAAGGCCCAGACCGCGGCCACGAAGGGCACGACGGCCTTCTCCACGGAGACGGTGGTGGAGC
GCGCGCGGGCGCTGGCGGCCCGGCCCTACCAGGCGCCGCCGAAGTCACTGCCGAAGGCGTACACGCAGCTCAACTACGAC
CAGTACCGCGACATCCGCTTCCGTCCGGAGCGCGCGCACTGGCGAGACGCGGGCCTGCCCTTCCAGGTGCAGTTCTTCCA
CCCGGGCTTCCTGTTCCAGTCCCCAGTGGTGATGAACGTCGTGGAGGCGGGCCGCTCGCAGCCGCTGCGCTTCTCCCAGG
ACCTCTTCAGCTACGGCAAGGTCGTCAACAAGGCGTCCCTGCCTCGCAGCGGCGTGGACGGCTTCGCGGGCCTGCGCTTC
CACCACCCGCTCAACCGCCCGGACATCTTCGACGAGCTCGCGGTGTTCCAGGGCGCCAGCTACTTCCGCTCGCTGGGCCA
GGGCAACCTCTACGGCCTCTCCGCGCGTGGCATCGCCATCGACACCGCGCAGCCGAGCCCCGAGGAGTTCCCGGAGTTTC
GAGAGTTCTGGCTGGAGCGCCCGGCCTCCGGCGCGGGCCAGGTGGTGGTTCACGCGCTGATGGACGGCCCGAGCATCACC
GGGGCGTACCGCTTCACCATCACCCCGGGCTCGAACACGGTGATGGAGGTGCAGGCCACCCTCTTCTCGCGCCGCACCAT
CGACAACCTGGGCGTGGCGCCGCTCACCAGCATGTACCTGTTCGGTGAGAACGACCGCGCGAAGTTCGACGACTTCCGGC
CGGAGGTCCACGACTCGGACGGCCTCCTCGTCTGGACCAAGGACGGCGAGCAACTGTGGCGCCCGCTGCAGAACCCGCGG
CAGGTGCGCACCTCCAGCTTCCGCGCGGAGACTCCGCGCGCCTTCGGTCTGTTGCAGCGCGATACGGCCTTCCACAACTA
CGAGGACCTGGAGGCCCACTACGAGCGCCGCCCCAGCGCGTGGGTGGAGCCCGTGGGCGAATGGGGCGCGGGCGCGGTGC
GGCTGGTGGAGATTCCGACGCCGGACGAGACGCACGACAACATCGTCGCCTTCTGGGTACCGGACGCGCCGCTCACCCCG
GGCACGCCGCTGCGCGTGGCCTACCGCCTGCACTGGGGCGCCAGGTCGCCCTGGGAGAGCACCGGCGGCGTCGTCACCTC
GACGCGCATCACCTCCGCCATCACCCCGGGCATGCCCGTGGGCGAAGGCGTCACGCCGGCCACGCGCCGATTCATCCTCG
ACTTCTCTCGCACCGCCCGCGCCGAGGACGGGCCGGTGGAAGCCGTCATCACCGCGGCCAAGGGCCAGGTGCTGCGCTCC
ACCATCCAGCGCCACGAACCTTCCGGGGGTTGGCGCACCACCTTCGAGCTGGAGCCCGAGGGCACCAGTGAACCCATCGA
GCTGCGCGCGTTCCTGCGGCGCGGTTCGGAGACCCTCACCGAGACCTGGAGCTATCTATGGATTCCGTGA

Upstream 100 bases:

>100_bases
CTGACGCGCCGCACCGCGAGTCCACGCGGAGCGTGCGGTCGGGCGAGGTCCGGGACACCGGAGCCGTTCGGCGAAACCTC
TCCTTCGGAGGCGCTCGGAC

Downstream 100 bases:

>100_bases
CGACGCCGAACACCAGCCCCTCCGTGCCGACCGACTGGGTCCGTCCGGAGACGTGCGTGGCGCTCGACGCCTTCTTCCAG
GGCTTCGGCTTCGAATCCGC

Product: glucan biosynthesis protein D

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 529; Mature: 528

Protein sequence:

>529_residues
MTSLRQKALKLGAPWLCAMAVASSGAAVAAPPAKAQTAATKGTTAFSTETVVERARALAARPYQAPPKSLPKAYTQLNYD
QYRDIRFRPERAHWRDAGLPFQVQFFHPGFLFQSPVVMNVVEAGRSQPLRFSQDLFSYGKVVNKASLPRSGVDGFAGLRF
HHPLNRPDIFDELAVFQGASYFRSLGQGNLYGLSARGIAIDTAQPSPEEFPEFREFWLERPASGAGQVVVHALMDGPSIT
GAYRFTITPGSNTVMEVQATLFSRRTIDNLGVAPLTSMYLFGENDRAKFDDFRPEVHDSDGLLVWTKDGEQLWRPLQNPR
QVRTSSFRAETPRAFGLLQRDTAFHNYEDLEAHYERRPSAWVEPVGEWGAGAVRLVEIPTPDETHDNIVAFWVPDAPLTP
GTPLRVAYRLHWGARSPWESTGGVVTSTRITSAITPGMPVGEGVTPATRRFILDFSRTARAEDGPVEAVITAAKGQVLRS
TIQRHEPSGGWRTTFELEPEGTSEPIELRAFLRRGSETLTETWSYLWIP

Sequences:

>Translated_529_residues
MTSLRQKALKLGAPWLCAMAVASSGAAVAAPPAKAQTAATKGTTAFSTETVVERARALAARPYQAPPKSLPKAYTQLNYD
QYRDIRFRPERAHWRDAGLPFQVQFFHPGFLFQSPVVMNVVEAGRSQPLRFSQDLFSYGKVVNKASLPRSGVDGFAGLRF
HHPLNRPDIFDELAVFQGASYFRSLGQGNLYGLSARGIAIDTAQPSPEEFPEFREFWLERPASGAGQVVVHALMDGPSIT
GAYRFTITPGSNTVMEVQATLFSRRTIDNLGVAPLTSMYLFGENDRAKFDDFRPEVHDSDGLLVWTKDGEQLWRPLQNPR
QVRTSSFRAETPRAFGLLQRDTAFHNYEDLEAHYERRPSAWVEPVGEWGAGAVRLVEIPTPDETHDNIVAFWVPDAPLTP
GTPLRVAYRLHWGARSPWESTGGVVTSTRITSAITPGMPVGEGVTPATRRFILDFSRTARAEDGPVEAVITAAKGQVLRS
TIQRHEPSGGWRTTFELEPEGTSEPIELRAFLRRGSETLTETWSYLWIP
>Mature_528_residues
TSLRQKALKLGAPWLCAMAVASSGAAVAAPPAKAQTAATKGTTAFSTETVVERARALAARPYQAPPKSLPKAYTQLNYDQ
YRDIRFRPERAHWRDAGLPFQVQFFHPGFLFQSPVVMNVVEAGRSQPLRFSQDLFSYGKVVNKASLPRSGVDGFAGLRFH
HPLNRPDIFDELAVFQGASYFRSLGQGNLYGLSARGIAIDTAQPSPEEFPEFREFWLERPASGAGQVVVHALMDGPSITG
AYRFTITPGSNTVMEVQATLFSRRTIDNLGVAPLTSMYLFGENDRAKFDDFRPEVHDSDGLLVWTKDGEQLWRPLQNPRQ
VRTSSFRAETPRAFGLLQRDTAFHNYEDLEAHYERRPSAWVEPVGEWGAGAVRLVEIPTPDETHDNIVAFWVPDAPLTPG
TPLRVAYRLHWGARSPWESTGGVVTSTRITSAITPGMPVGEGVTPATRRFILDFSRTARAEDGPVEAVITAAKGQVLRST
IQRHEPSGGWRTTFELEPEGTSEPIELRAFLRRGSETLTETWSYLWIP

Specific function: Involved in the biosynthesis of osmoregulated periplasmic glucans (OPGs) [H]

COG id: COG3131

COG function: function code P; Periplasmic glucans biosynthesis protein

Gene ontology:

Cell location: Periplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the opgD/opgG family [H]

Homologues:

Organism=Escherichia coli, GI1787286, Length=507, Percent_Identity=41.025641025641, Blast_Score=400, Evalue=1e-112,
Organism=Escherichia coli, GI145693128, Length=529, Percent_Identity=36.2948960302458, Blast_Score=315, Evalue=4e-87,

Paralogues:

None

Copy number: 280 Molecules/Cell In: Growth-Phase, Minimal-Media (Based on E. coli). [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014438
- InterPro:   IPR007444
- InterPro:   IPR011013
- InterPro:   IPR014756 [H]

Pfam domain/function: PF04349 MdoG [H]

EC number: NA

Molecular weight: Translated: 58716; Mature: 58584

Theoretical pI: Translated: 7.88; Mature: 7.88

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTSLRQKALKLGAPWLCAMAVASSGAAVAAPPAKAQTAATKGTTAFSTETVVERARALAA
CCHHHHHHHHCCCCHHHHHHHHCCCCEEECCCCCHHHHCCCCCCCCHHHHHHHHHHHHHC
RPYQAPPKSLPKAYTQLNYDQYRDIRFRPERAHWRDAGLPFQVQFFHPGFLFQSPVVMNV
CCCCCCHHHHHHHHHHCCHHHHCCCEECCCCCCCCCCCCCEEEEEECCCCHHCCCHHHHH
VEAGRSQPLRFSQDLFSYGKVVNKASLPRSGVDGFAGLRFHHPLNRPDIFDELAVFQGAS
HHCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEECCCCCCCHHHHHHHHHCCCH
YFRSLGQGNLYGLSARGIAIDTAQPSPEEFPEFREFWLERPASGAGQVVVHALMDGPSIT
HHHHCCCCCEEEEEECCEEEECCCCCHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCC
GAYRFTITPGSNTVMEVQATLFSRRTIDNLGVAPLTSMYLFGENDRAKFDDFRPEVHDSD
EEEEEEEECCCCCEEEHHHHHHHHHHHHHCCCCCHHEEEEECCCCCCCCCCCCCCCCCCC
GLLVWTKDGEQLWRPLQNPRQVRTSSFRAETPRAFGLLQRDTAFHNYEDLEAHYERRPSA
CEEEEECCHHHHHHHCCCHHHHHHHCCCCCCCHHHHHHHHCCCCCCHHHHHHHHHCCCCH
WVEPVGEWGAGAVRLVEIPTPDETHDNIVAFWVPDAPLTPGTPLRVAYRLHWGARSPWES
HHCCCCCCCCCCEEEEECCCCCCCCCCEEEEEECCCCCCCCCCEEEEEEEECCCCCCCCC
TGGVVTSTRITSAITPGMPVGEGVTPATRRFILDFSRTARAEDGPVEAVITAAKGQVLRS
CCCEEEEHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCEEEEEEHHHHHHHHH
TIQRHEPSGGWRTTFELEPEGTSEPIELRAFLRRGSETLTETWSYLWIP
HHHHCCCCCCCEEEEEECCCCCCCHHHHHHHHHCCCHHHHHCCCEEECC
>Mature Secondary Structure 
TSLRQKALKLGAPWLCAMAVASSGAAVAAPPAKAQTAATKGTTAFSTETVVERARALAA
CHHHHHHHHCCCCHHHHHHHHCCCCEEECCCCCHHHHCCCCCCCCHHHHHHHHHHHHHC
RPYQAPPKSLPKAYTQLNYDQYRDIRFRPERAHWRDAGLPFQVQFFHPGFLFQSPVVMNV
CCCCCCHHHHHHHHHHCCHHHHCCCEECCCCCCCCCCCCCEEEEEECCCCHHCCCHHHHH
VEAGRSQPLRFSQDLFSYGKVVNKASLPRSGVDGFAGLRFHHPLNRPDIFDELAVFQGAS
HHCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEECCCCCCCHHHHHHHHHCCCH
YFRSLGQGNLYGLSARGIAIDTAQPSPEEFPEFREFWLERPASGAGQVVVHALMDGPSIT
HHHHCCCCCEEEEEECCEEEECCCCCHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCC
GAYRFTITPGSNTVMEVQATLFSRRTIDNLGVAPLTSMYLFGENDRAKFDDFRPEVHDSD
EEEEEEEECCCCCEEEHHHHHHHHHHHHHCCCCCHHEEEEECCCCCCCCCCCCCCCCCCC
GLLVWTKDGEQLWRPLQNPRQVRTSSFRAETPRAFGLLQRDTAFHNYEDLEAHYERRPSA
CEEEEECCHHHHHHHCCCHHHHHHHCCCCCCCHHHHHHHHCCCCCCHHHHHHHHHCCCCH
WVEPVGEWGAGAVRLVEIPTPDETHDNIVAFWVPDAPLTPGTPLRVAYRLHWGARSPWES
HHCCCCCCCCCCEEEEECCCCCCCCCCEEEEEECCCCCCCCCCEEEEEEEECCCCCCCCC
TGGVVTSTRITSAITPGMPVGEGVTPATRRFILDFSRTARAEDGPVEAVITAAKGQVLRS
CCCEEEEHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCEEEEEEHHHHHHHHH
TIQRHEPSGGWRTTFELEPEGTSEPIELRAFLRRGSETLTETWSYLWIP
HHHHCCCCCCCEEEEEECCCCCCCHHHHHHHHHCCCHHHHHCCCEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA