| Definition | Myxococcus xanthus DK 1622 chromosome, complete genome. |
|---|---|
| Accession | NC_008095 |
| Length | 9,139,763 |
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The map label for this gene is kinE [H]
Identifier: 108757873
GI number: 108757873
Start: 2774506
End: 2776797
Strand: Reverse
Name: kinE [H]
Synonym: MXAN_2386
Alternate gene names: 108757873
Gene position: 2776797-2774506 (Counterclockwise)
Preceding gene: 108763756
Following gene: 108763699
Centisome position: 30.38
GC content: 70.11
Gene sequence:
>2292_bases ATGCGGGTCCTGATTGTCACCCAGGGGGGAGGGGCGGACCTGGCGCCAGTCGAGTCCTGGCTGCGTGAGCAGGGACACAC GGTGGTCACCGTGACGCGCGAGGCGGAGGTGCCCGCCGCGTGGCGCAGCGGAACGTGCGCGCTGGTGATGGTGGATGCCC GGACGGACCCCTCCCGCGTCCCGCTGGTGCGCGCACTTCGCAGCCTGCCCGGCGGTGAGGAATCCGTGTTGCTCCTCCTG GGCCACCGGGGCGCGCTGGGCGGACTGCGGCCCGTCCTGGAGGCCGGCGCCGATGATTTGCTCGCGTGGCCCGTGGATGA GGAGGAACTGGCGCTGCGGTTGGAGCTGGCCCACCGCCGCTTCGTCCGGCGCGAGGGCCGCAAGGGCCTGCCCTTCGGAG ATGACCTGAAGGAGACGCTGCTGGCCGTCAGCCCCGTGCCCACGTCCATCACCACCATCACCGAGGGGCGCGTGGTGGCG GCCAACGAAGCCTACTTCGAACTCTTCGGCTACACGCGCGAGGAGGTCATCGGGCGCACCACGATGGAGCTGGCGCTGTG GCAGGCGCCCCTGAACCGCTCGCAAATCGTGGACACGCTGCGGCGCCACGGCACGGTGCGCGGCGTGGACGCGCAGTACC GCACCCGCGAGGGCGAGCTGCGGCACACGTTGCTCTTCATGGGCCTGGTGCCCTACGGCGGCACGCCCCACATCATCGCC TTCTTCCCGGACATCACCCCGCTCAAGCGCGCCGAGGAGAGCCTGCGCCGCTCGGAGGTGAGCTTCCGCACCCTCATCGG CAGCCTGCCGGACATGGTGGCCGTCTTCGACACCGACTCGCGCGTGCGCTACGCCAACCTCAAGGTCGCCACGGCCCTGG GCTACGAGAGTGCGAACGAGCTGCTGGGCAAGCACTTCTCCGACATCATCCCCAAGGAGGACTTCGCCAGCGCCAACGCG CGCATGCACGAAGCCATCCGCACCGGCCGCGCGGCGCACCAGGAGCGGCGGCTGCTCAAACGCGACGGCAGCGTGCTGCA CGTGGAGTCCACCACCTTTCCCCTGCCCTTCGACGGCGAGGACTCCATCGTTGCCGTCTCCCATGACTTGACGGAGCGCT ACCAGATGCAGGCGCGGCTGATGCTCGCGCAGCGCATGGCCTCCGTCGGCACACTGGCCGCGGGCGTGGCACACGAAATC AACAACCCCCTGGCCTACCTCACCGCCAACCTGGCCTTCGCACGCGAGGAGCTCACCGGCGTGCTGCCCACCGGCACCCG GAACATGGAGCCCCGGCTGGCGGAGGCGGTGGCCAGCGCCCAGGCCGCGCTCGCCGAGGCGCAGCAGGGCGCCGACCGGG TGCGCAGCATCGTCCGGGACTTGAAGACGTTCAGCCGGGTGGACTCAGCGGAGAGCGAGGAAGTGGACGTCCGGCAGGTG CTGGAGTCCACGCTGAACCTGGCCACCACGGAGATTCGTCACCGCGCCCGCCTGGTGAAGCAGCTCGACGCGGTCCCCAC CGTGGTCGGCAACGAGTCACGGTTGGGACAGGTGTTCCTCAACCTGCTGGTGAACGCCGCCCAGGCCATTCCCTCCGGGA CGCCGGAGCGCCATGAAATCCGCGTCGTCACCCGCCTTTCGGGCAACGGCCACGTCTGCGTGGAGGTGTCGGACACGGGC GCCGGTATCGCCAAGGAACACCTGCCGCGCCTGTTCGACCCCTTCTTCACCACCAAGGAGCCCGGGGTGGGCACCGGACT GGGCCTGTCCATCTGCCACAGCCTGGTGACGGCCCTGGGTGGGGAAATCCATGCGACGAGCGAGCCGGGCAGGGGCTCCA CCTTCCAGGTGCTCCTGACCCCCTCCCAGCGACTCGGGACCGAGCGCCCACCGCCCGCTCCGCCGCCCGCCCCCACGGAG AAACGGGGCAGCGTGCTGGTGGTGGACGACGAGCCGCTCGTCTGCACGGCCCTGGGGCGTACGCTGCGTCCGCACCACGA CGTCACCCTCTTCACCCGGGCCCAGGAGGCCTTGGAGCGCATCGAGGCCGGCGAGCGCTTCGACGTCGTCTTCTGCGACC TGATGATGCCGGGCATGAGTGGGATGGACTTCTACTCCGCCCTCCAGGCCCGCCACCCCGAGCAGGCCCAGCGGGTCATC TTCCTCACCGGCGGCGCGGTGACGCCTCAGGCCCGCGCCTTCCTGGAATCGGTACCAAGCCCCCATCTGGAAAAGCCGTT CGCTGGCAGGGAACTCCTCTCGCTGATCCAGGAACGGCTCGCGCACGCATAG
Upstream 100 bases:
>100_bases CCGGGCGCTTCGTCACCTGCACGCCACACCGGCACGGCACCCCGCTTTTACAACAGCAAACGTCGTGTAACGATGAGCGT TCGTCATCAAGAGGTGTCCC
Downstream 100 bases:
>100_bases CGAATTGTCAGCCTGTGGAAGATTTGGACAGGCCCCCCCACCCCCTGCCCCTATCCTCCCCACCGCCCCCGACCGCTGGG CAGGAAACCGTCCACGGGAG
Product: putative sensory box histidine kinase/response regulator
Products: NA
Alternate protein names: Sensor histidine kinase E [H]
Number of amino acids: Translated: 763; Mature: 763
Protein sequence:
>763_residues MRVLIVTQGGGADLAPVESWLREQGHTVVTVTREAEVPAAWRSGTCALVMVDARTDPSRVPLVRALRSLPGGEESVLLLL GHRGALGGLRPVLEAGADDLLAWPVDEEELALRLELAHRRFVRREGRKGLPFGDDLKETLLAVSPVPTSITTITEGRVVA ANEAYFELFGYTREEVIGRTTMELALWQAPLNRSQIVDTLRRHGTVRGVDAQYRTREGELRHTLLFMGLVPYGGTPHIIA FFPDITPLKRAEESLRRSEVSFRTLIGSLPDMVAVFDTDSRVRYANLKVATALGYESANELLGKHFSDIIPKEDFASANA RMHEAIRTGRAAHQERRLLKRDGSVLHVESTTFPLPFDGEDSIVAVSHDLTERYQMQARLMLAQRMASVGTLAAGVAHEI NNPLAYLTANLAFAREELTGVLPTGTRNMEPRLAEAVASAQAALAEAQQGADRVRSIVRDLKTFSRVDSAESEEVDVRQV LESTLNLATTEIRHRARLVKQLDAVPTVVGNESRLGQVFLNLLVNAAQAIPSGTPERHEIRVVTRLSGNGHVCVEVSDTG AGIAKEHLPRLFDPFFTTKEPGVGTGLGLSICHSLVTALGGEIHATSEPGRGSTFQVLLTPSQRLGTERPPPAPPPAPTE KRGSVLVVDDEPLVCTALGRTLRPHHDVTLFTRAQEALERIEAGERFDVVFCDLMMPGMSGMDFYSALQARHPEQAQRVI FLTGGAVTPQARAFLESVPSPHLEKPFAGRELLSLIQERLAHA
Sequences:
>Translated_763_residues MRVLIVTQGGGADLAPVESWLREQGHTVVTVTREAEVPAAWRSGTCALVMVDARTDPSRVPLVRALRSLPGGEESVLLLL GHRGALGGLRPVLEAGADDLLAWPVDEEELALRLELAHRRFVRREGRKGLPFGDDLKETLLAVSPVPTSITTITEGRVVA ANEAYFELFGYTREEVIGRTTMELALWQAPLNRSQIVDTLRRHGTVRGVDAQYRTREGELRHTLLFMGLVPYGGTPHIIA FFPDITPLKRAEESLRRSEVSFRTLIGSLPDMVAVFDTDSRVRYANLKVATALGYESANELLGKHFSDIIPKEDFASANA RMHEAIRTGRAAHQERRLLKRDGSVLHVESTTFPLPFDGEDSIVAVSHDLTERYQMQARLMLAQRMASVGTLAAGVAHEI NNPLAYLTANLAFAREELTGVLPTGTRNMEPRLAEAVASAQAALAEAQQGADRVRSIVRDLKTFSRVDSAESEEVDVRQV LESTLNLATTEIRHRARLVKQLDAVPTVVGNESRLGQVFLNLLVNAAQAIPSGTPERHEIRVVTRLSGNGHVCVEVSDTG AGIAKEHLPRLFDPFFTTKEPGVGTGLGLSICHSLVTALGGEIHATSEPGRGSTFQVLLTPSQRLGTERPPPAPPPAPTE KRGSVLVVDDEPLVCTALGRTLRPHHDVTLFTRAQEALERIEAGERFDVVFCDLMMPGMSGMDFYSALQARHPEQAQRVI FLTGGAVTPQARAFLESVPSPHLEKPFAGRELLSLIQERLAHA >Mature_763_residues MRVLIVTQGGGADLAPVESWLREQGHTVVTVTREAEVPAAWRSGTCALVMVDARTDPSRVPLVRALRSLPGGEESVLLLL GHRGALGGLRPVLEAGADDLLAWPVDEEELALRLELAHRRFVRREGRKGLPFGDDLKETLLAVSPVPTSITTITEGRVVA ANEAYFELFGYTREEVIGRTTMELALWQAPLNRSQIVDTLRRHGTVRGVDAQYRTREGELRHTLLFMGLVPYGGTPHIIA FFPDITPLKRAEESLRRSEVSFRTLIGSLPDMVAVFDTDSRVRYANLKVATALGYESANELLGKHFSDIIPKEDFASANA RMHEAIRTGRAAHQERRLLKRDGSVLHVESTTFPLPFDGEDSIVAVSHDLTERYQMQARLMLAQRMASVGTLAAGVAHEI NNPLAYLTANLAFAREELTGVLPTGTRNMEPRLAEAVASAQAALAEAQQGADRVRSIVRDLKTFSRVDSAESEEVDVRQV LESTLNLATTEIRHRARLVKQLDAVPTVVGNESRLGQVFLNLLVNAAQAIPSGTPERHEIRVVTRLSGNGHVCVEVSDTG AGIAKEHLPRLFDPFFTTKEPGVGTGLGLSICHSLVTALGGEIHATSEPGRGSTFQVLLTPSQRLGTERPPPAPPPAPTE KRGSVLVVDDEPLVCTALGRTLRPHHDVTLFTRAQEALERIEAGERFDVVFCDLMMPGMSGMDFYSALQARHPEQAQRVI FLTGGAVTPQARAFLESVPSPHLEKPFAGRELLSLIQERLAHA
Specific function: Phosphorylates the sporulation-regulatory protein spo0A under biofilm growth conditions. Also able to weakly phosphorylate spo0F [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Integral Membrane Protein. Inner Membrane [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 4 PAS (PER-ARNT-SIM) domains [H]
Homologues:
Organism=Escherichia coli, GI1788549, Length=258, Percent_Identity=31.0077519379845, Blast_Score=126, Evalue=6e-30, Organism=Escherichia coli, GI1790436, Length=252, Percent_Identity=32.5396825396825, Blast_Score=115, Evalue=9e-27, Organism=Escherichia coli, GI48994928, Length=536, Percent_Identity=23.5074626865672, Blast_Score=100, Evalue=3e-22, Organism=Escherichia coli, GI145693157, Length=280, Percent_Identity=31.0714285714286, Blast_Score=97, Evalue=3e-21, Organism=Escherichia coli, GI87081816, Length=269, Percent_Identity=29.7397769516729, Blast_Score=91, Evalue=3e-19, Organism=Escherichia coli, GI1790300, Length=366, Percent_Identity=28.9617486338798, Blast_Score=86, Evalue=1e-17, Organism=Escherichia coli, GI1786600, Length=376, Percent_Identity=25, Blast_Score=82, Evalue=1e-16, Organism=Escherichia coli, GI1789149, Length=248, Percent_Identity=29.0322580645161, Blast_Score=74, Evalue=4e-14, Organism=Escherichia coli, GI1788713, Length=207, Percent_Identity=27.0531400966184, Blast_Score=73, Evalue=8e-14, Organism=Escherichia coli, GI1788393, Length=273, Percent_Identity=27.8388278388278, Blast_Score=66, Evalue=1e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003594 - InterPro: IPR000014 - InterPro: IPR013767 - InterPro: IPR004358 - InterPro: IPR003661 - InterPro: IPR005467 - InterPro: IPR009082 [H]
Pfam domain/function: PF02518 HATPase_c; PF00512 HisKA; PF00989 PAS [H]
EC number: =2.7.13.3 [H]
Molecular weight: Translated: 83369; Mature: 83369
Theoretical pI: Translated: 6.48; Mature: 6.48
Prosite motif: PS50112 PAS ; PS50113 PAC ; PS50110 RESPONSE_REGULATORY ; PS50109 HIS_KIN ; PS00133 CARBOXYPEPT_ZN_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRVLIVTQGGGADLAPVESWLREQGHTVVTVTREAEVPAAWRSGTCALVMVDARTDPSRV CEEEEEECCCCCCHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCCEEEEEEECCCCCCCC PLVRALRSLPGGEESVLLLLGHRGALGGLRPVLEAGADDLLAWPVDEEELALRLELAHRR HHHHHHHHCCCCCCEEEEEEECCCCCCCHHHHHHCCCCCEEECCCCHHHHHHHHHHHHHH FVRREGRKGLPFGDDLKETLLAVSPVPTSITTITEGRVVAANEAYFELFGYTREEVIGRT HHHHCCCCCCCCCCCHHHHHHCCCCCCCCEEEEECCEEEEECHHHHHHHCCCHHHHHCHH TMELALWQAPLNRSQIVDTLRRHGTVRGVDAQYRTREGELRHTLLFMGLVPYGGTPHIIA HHHHHHHHCCCCHHHHHHHHHHCCCEECCCCHHHCCCCHHHHHHHHHHHCCCCCCCCEEE FFPDITPLKRAEESLRRSEVSFRTLIGSLPDMVAVFDTDSRVRYANLKVATALGYESANE ECCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCEEEECEEEEEHHCHHHHHH LLGKHFSDIIPKEDFASANARMHEAIRTGRAAHQERRLLKRDGSVLHVESTTFPLPFDGE HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCC DSIVAVSHDLTERYQMQARLMLAQRMASVGTLAAGVAHEINNPLAYLTANLAFAREELTG CCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCE VLPTGTRNMEPRLAEAVASAQAALAEAQQGADRVRSIVRDLKTFSRVDSAESEEVDVRQV ECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHH LESTLNLATTEIRHRARLVKQLDAVPTVVGNESRLGQVFLNLLVNAAQAIPSGTPERHEI HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCEEE RVVTRLSGNGHVCVEVSDTGAGIAKEHLPRLFDPFFTTKEPGVGTGLGLSICHSLVTALG EEEEEECCCCEEEEEECCCCCCHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHCC GEIHATSEPGRGSTFQVLLTPSQRLGTERPPPAPPPAPTEKRGSVLVVDDEPLVCTALGR CCEEECCCCCCCCEEEEEECCHHHCCCCCCCCCCCCCCCCCCCCEEEECCCCEEHHHHCC TLRPHHDVTLFTRAQEALERIEAGERFDVVFCDLMMPGMSGMDFYSALQARHPEQAQRVI CCCCCCCEEEHHHHHHHHHHHHCCCCEEEEEEEHHCCCCCCCHHHHHHHHCCCCCCCEEE FLTGGAVTPQARAFLESVPSPHLEKPFAGRELLSLIQERLAHA EEECCCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCC >Mature Secondary Structure MRVLIVTQGGGADLAPVESWLREQGHTVVTVTREAEVPAAWRSGTCALVMVDARTDPSRV CEEEEEECCCCCCHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCCEEEEEEECCCCCCCC PLVRALRSLPGGEESVLLLLGHRGALGGLRPVLEAGADDLLAWPVDEEELALRLELAHRR HHHHHHHHCCCCCCEEEEEEECCCCCCCHHHHHHCCCCCEEECCCCHHHHHHHHHHHHHH FVRREGRKGLPFGDDLKETLLAVSPVPTSITTITEGRVVAANEAYFELFGYTREEVIGRT HHHHCCCCCCCCCCCHHHHHHCCCCCCCCEEEEECCEEEEECHHHHHHHCCCHHHHHCHH TMELALWQAPLNRSQIVDTLRRHGTVRGVDAQYRTREGELRHTLLFMGLVPYGGTPHIIA HHHHHHHHCCCCHHHHHHHHHHCCCEECCCCHHHCCCCHHHHHHHHHHHCCCCCCCCEEE FFPDITPLKRAEESLRRSEVSFRTLIGSLPDMVAVFDTDSRVRYANLKVATALGYESANE ECCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCEEEECEEEEEHHCHHHHHH LLGKHFSDIIPKEDFASANARMHEAIRTGRAAHQERRLLKRDGSVLHVESTTFPLPFDGE HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCC DSIVAVSHDLTERYQMQARLMLAQRMASVGTLAAGVAHEINNPLAYLTANLAFAREELTG CCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCE VLPTGTRNMEPRLAEAVASAQAALAEAQQGADRVRSIVRDLKTFSRVDSAESEEVDVRQV ECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHH LESTLNLATTEIRHRARLVKQLDAVPTVVGNESRLGQVFLNLLVNAAQAIPSGTPERHEI HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCEEE RVVTRLSGNGHVCVEVSDTGAGIAKEHLPRLFDPFFTTKEPGVGTGLGLSICHSLVTALG EEEEEECCCCEEEEEECCCCCCHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHCC GEIHATSEPGRGSTFQVLLTPSQRLGTERPPPAPPPAPTEKRGSVLVVDDEPLVCTALGR CCEEECCCCCCCCEEEEEECCHHHCCCCCCCCCCCCCCCCCCCCEEEECCCCEEHHHHCC TLRPHHDVTLFTRAQEALERIEAGERFDVVFCDLMMPGMSGMDFYSALQARHPEQAQRVI CCCCCCCEEEHHHHHHHHHHHHCCCCEEEEEEEHHCCCCCCCHHHHHHHHCCCCCCCEEE FLTGGAVTPQARAFLESVPSPHLEKPFAGRELLSLIQERLAHA EEECCCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9384377 [H]