| Definition | Myxococcus xanthus DK 1622 chromosome, complete genome. |
|---|---|
| Accession | NC_008095 |
| Length | 9,139,763 |
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The map label for this gene is ttgG [H]
Identifier: 108763599
GI number: 108763599
Start: 102329
End: 103465
Strand: Direct
Name: ttgG [H]
Synonym: MXAN_0091
Alternate gene names: 108763599
Gene position: 102329-103465 (Clockwise)
Preceding gene: 108758237
Following gene: 108762552
Centisome position: 1.12
GC content: 69.74
Gene sequence:
>1137_bases ATGCCTATCCAACGGTCGAAGCGCCTTCTTCTTGCATCGACGCTGCTCCCGCTTCTGGCCTGTGACGGCAAGCAGGAAGA AGCAGCCTTCGCACCGCCGGTCCAGAAGGTGTCCACGCTGAAGGTGCAAGGGGAGGCCGTTGTCCTTCACGACGAATTCC CCGCGCGTGTCTCCGCGTTCCGGGTCGCGGAAGTCCGCCCTCAGGTGGGCGGGCTCGTGCGCAGCCGGCGCTTCTCCGAA GGAGACACGGTCCAGAAGGGGCAGCCGCTCTACCAACTGGAAGCGGCGGTGTTCCGCGCGAATGTAGAAGGCGCGGCGGC GGCCCATGCGGCCAGTGAGGCCGGGCGGCTCCAAGCGGAGCTGCATGCGGGGCGCATCCAGTCCCTCTTCGAGAAAGGCG CGAGCACCCAGCAGGCGCACGATGACGCCCGGGCCGCGCTCGCCATCGCGAATGCGGAGGTGGCGCGCGCCCGCGCGGCG CTGGACAGGGCCCGCGTCGACCTGGACTACGCCACGATTACCGCCCCCATCGCGGGGCACATCGGCATCTCCCAGGTCAA TGAAGGCGCGCTCGTCGGCCCCGCGGATGCCACGCCGTTGAGCGTCATCCAGCAGATTGACCGCGTCTTCGTCGACATCA AGTCACCCGTGGAGCGCGCGGCGGGCTTGCAGTCACTCCAGGGAGGCACCGGAGAGGCGGGGGCGGAAGTCATCGTGCTC TCCTCGACGGGGGCGCCCTATCCGGAGCGAGGCCGCGTTCAGTTCTCGGACATCTCGGTCGACCCCGGGTCCGGCGAGCT CACGGTGCGCGCCCTGGTCCCCAACGCACAGCGGAAGCTCCTGCCGGGCATGTTCGTGAAGGCGCGCGTCGTGCTCGGAG AGGTGGCCGGTGCGCTCCTCGTTCCCCAGCAGGCCGTGCTTCACGACGCGCAGGGCCAGGCGCAGGTCTTCATCGTCCGA GAGGACAACACCGCGGAGGCGCGCAACGTCCGCGCCGGACGCATCGTCAGCGGACGCTACCTGGTGGAGGAGGGACTCTC CGCCGGAGAGCGTGTCGTGGTCGAGGGGCAGGACCGTCTTGCGCCAGGCCAGCAGGTCACCCCCGTCGAGTGGCAGCACG CCCCGGCCTCGCGCTGA
Upstream 100 bases:
>100_bases AGGTGACGTTTCATCCCCTGGCTGCTGGCGGACCAGGGCGTGGTGCTGTGTGAAAAGTACGCTTTTACGTTTTCTCCGAC GTTTTCCTCGCCAGACGACA
Downstream 100 bases:
>100_bases ACCTGGAGTGAGCCGTGCCAAGATTCTTCATTGAACGCCCGGTCTTCGCCTGGGTGATTGCCATCTTCATCGTGCTCGCC GGAGCCATCTCCATTCCCCG
Product: HAE1 family efflux transporter MFP subunit
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 378; Mature: 377
Protein sequence:
>378_residues MPIQRSKRLLLASTLLPLLACDGKQEEAAFAPPVQKVSTLKVQGEAVVLHDEFPARVSAFRVAEVRPQVGGLVRSRRFSE GDTVQKGQPLYQLEAAVFRANVEGAAAAHAASEAGRLQAELHAGRIQSLFEKGASTQQAHDDARAALAIANAEVARARAA LDRARVDLDYATITAPIAGHIGISQVNEGALVGPADATPLSVIQQIDRVFVDIKSPVERAAGLQSLQGGTGEAGAEVIVL SSTGAPYPERGRVQFSDISVDPGSGELTVRALVPNAQRKLLPGMFVKARVVLGEVAGALLVPQQAVLHDAQGQAQVFIVR EDNTAEARNVRAGRIVSGRYLVEEGLSAGERVVVEGQDRLAPGQQVTPVEWQHAPASR
Sequences:
>Translated_378_residues MPIQRSKRLLLASTLLPLLACDGKQEEAAFAPPVQKVSTLKVQGEAVVLHDEFPARVSAFRVAEVRPQVGGLVRSRRFSE GDTVQKGQPLYQLEAAVFRANVEGAAAAHAASEAGRLQAELHAGRIQSLFEKGASTQQAHDDARAALAIANAEVARARAA LDRARVDLDYATITAPIAGHIGISQVNEGALVGPADATPLSVIQQIDRVFVDIKSPVERAAGLQSLQGGTGEAGAEVIVL SSTGAPYPERGRVQFSDISVDPGSGELTVRALVPNAQRKLLPGMFVKARVVLGEVAGALLVPQQAVLHDAQGQAQVFIVR EDNTAEARNVRAGRIVSGRYLVEEGLSAGERVVVEGQDRLAPGQQVTPVEWQHAPASR >Mature_377_residues PIQRSKRLLLASTLLPLLACDGKQEEAAFAPPVQKVSTLKVQGEAVVLHDEFPARVSAFRVAEVRPQVGGLVRSRRFSEG DTVQKGQPLYQLEAAVFRANVEGAAAAHAASEAGRLQAELHAGRIQSLFEKGASTQQAHDDARAALAIANAEVARARAAL DRARVDLDYATITAPIAGHIGISQVNEGALVGPADATPLSVIQQIDRVFVDIKSPVERAAGLQSLQGGTGEAGAEVIVLS STGAPYPERGRVQFSDISVDPGSGELTVRALVPNAQRKLLPGMFVKARVVLGEVAGALLVPQQAVLHDAQGQAQVFIVRE DNTAEARNVRAGRIVSGRYLVEEGLSAGERVVVEGQDRLAPGQQVTPVEWQHAPASR
Specific function: The periplasmic linker component of an organic solvent efflux pump. Involved in export of a number of organic solvents, including toluene and styrene. This is the most important solvent efflux pump in this strain, although it can export AMP and some antib
COG id: COG0845
COG function: function code M; Membrane-fusion protein
Gene ontology:
Cell location: Cell inner membrane; Lipid-anchor (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family [H]
Homologues:
Organism=Escherichia coli, GI1789665, Length=371, Percent_Identity=39.622641509434, Blast_Score=231, Evalue=6e-62, Organism=Escherichia coli, GI1786668, Length=362, Percent_Identity=39.5027624309392, Blast_Score=228, Evalue=4e-61, Organism=Escherichia coli, GI1789929, Length=366, Percent_Identity=37.7049180327869, Blast_Score=216, Evalue=2e-57, Organism=Escherichia coli, GI87082036, Length=323, Percent_Identity=27.5541795665635, Blast_Score=108, Evalue=8e-25,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006143 [H]
Pfam domain/function: PF00529 HlyD [H]
EC number: NA
Molecular weight: Translated: 39947; Mature: 39816
Theoretical pI: Translated: 6.90; Mature: 6.90
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 0.5 %Met (Translated Protein) 0.8 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 0.3 %Met (Mature Protein) 0.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPIQRSKRLLLASTLLPLLACDGKQEEAAFAPPVQKVSTLKVQGEAVVLHDEFPARVSAF CCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHEEEEEECCEEEEECCCCCHHHHH RVAEVRPQVGGLVRSRRFSEGDTVQKGQPLYQLEAAVFRANVEGAAAAHAASEAGRLQAE HHHHHCCHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH LHAGRIQSLFEKGASTQQAHDDARAALAIANAEVARARAALDRARVDLDYATITAPIAGH HHHHHHHHHHHCCCCCHHHHHHHHHEEEEHHHHHHHHHHHHHHHHEECCHHEEEECHHCC IGISQVNEGALVGPADATPLSVIQQIDRVFVDIKSPVERAAGLQSLQGGTGEAGAEVIVL CCHHCCCCCCEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEE SSTGAPYPERGRVQFSDISVDPGSGELTVRALVPNAQRKLLPGMFVKARVVLGEVAGALL ECCCCCCCCCCCEEEEEEEECCCCCCEEEEEECCCHHHHHCCCHHHHHHHHHHHHHHHHH VPQQAVLHDAQGQAQVFIVREDNTAEARNVRAGRIVSGRYLVEEGLSAGERVVVEGQDRL CCCHHHHHCCCCCEEEEEEECCCCCHHHCCCCCEEECCHHHHHHCCCCCCEEEEECCCCC APGQQVTPVEWQHAPASR CCCCCCCCCCCCCCCCCC >Mature Secondary Structure PIQRSKRLLLASTLLPLLACDGKQEEAAFAPPVQKVSTLKVQGEAVVLHDEFPARVSAF CCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHEEEEEECCEEEEECCCCCHHHHH RVAEVRPQVGGLVRSRRFSEGDTVQKGQPLYQLEAAVFRANVEGAAAAHAASEAGRLQAE HHHHHCCHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH LHAGRIQSLFEKGASTQQAHDDARAALAIANAEVARARAALDRARVDLDYATITAPIAGH HHHHHHHHHHHCCCCCHHHHHHHHHEEEEHHHHHHHHHHHHHHHHEECCHHEEEECHHCC IGISQVNEGALVGPADATPLSVIQQIDRVFVDIKSPVERAAGLQSLQGGTGEAGAEVIVL CCHHCCCCCCEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEE SSTGAPYPERGRVQFSDISVDPGSGELTVRALVPNAQRKLLPGMFVKARVVLGEVAGALL ECCCCCCCCCCCEEEEEEEECCCCCCEEEEEECCCHHHHHCCCHHHHHHHHHHHHHHHHH VPQQAVLHDAQGQAQVFIVREDNTAEARNVRAGRIVSGRYLVEEGLSAGERVVVEGQDRL CCCHHHHHCCCCCEEEEEEECCCCCHHHCCCCCEEECCHHHHHHCCCCCCEEEEECCCCC APGQQVTPVEWQHAPASR CCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 11395460 [H]