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The map label for this gene is ybjK [C]

Identifier: 108758237

GI number: 108758237

Start: 101508

End: 102089

Strand: Direct

Name: ybjK [C]

Synonym: MXAN_0090

Alternate gene names: 108758237

Gene position: 101508-102089 (Clockwise)

Preceding gene: 108759330

Following gene: 108763599

Centisome position: 1.11

GC content: 64.95

Gene sequence:

>582_bases
ATGTTTCGCGCCGTGACGAGCGCCCACCAACGCAAGAAGCAGCCCGACGTCATTCGCGCGCAGCTGCTCCGCGCCGCGGC
GGAGCTCGTCACGCAAGGGGGAACCCAGGCGGTGACGCTCGAGGCCGTCGCGGCGCACGCGGGGGTGACGAAGGGCGGCC
TCCAGCATCATTTCAAGAGCAAGCAGCTGCTGCTCGACGCGCTGTTCGAGGAGATGAACCGGCAGTTCGTCGAGTCGTTC
CACGCGAACATCGCGGAAGACCCGGAGGCCCATGGGCGCGAGGCGCGTGCGTATCTGCGTGCCATGGTCTCCAGTCCCGC
CAACTCCGAGCAGATTCGGGGCTTGAGAGCCCTGATTGGAAGCATGATGGTGGAGCCCGACCTTCGCGAACGATGGAACT
GTAGCTGGCAGGATGACCTCCAGCTGAAGTCCGGTGAGGTCAGCCCCCAGGACATCAATTCCATCATCTGCAGGCTCGCG
ACCGACGGCCTGTGGTTCGCGGACCTGCTCGAGGACCAGGGAATCAGGCCTGAAGTGAGAGCCGCCGTCATCCGAAGGCT
CGAGGAACTCACCCGGGAGTAG

Upstream 100 bases:

>100_bases
CTCGCGCTTGAGCGTCCGGGAGGCCGCCGGGCGTAAATGCCTGAAATAAGGGCCTTTTCAGGCCCTCAAATGAAAGTTGA
AAAGAATCCATCCGGACGGC

Downstream 100 bases:

>100_bases
GCGCCCCTCGCTGTCAGTGTGTCTGTCTCCGGCTGACACCCCGGCCAAGAATTCGTCTGTCAGGGTCTCCCGTGAGGGGC
CGTCCGTGGCGGGTTTGTGT

Product: TetR family transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator TetR Family; Transcriptional Regulator; Regulatory Protein TetR; Transcriptional Regulator TetR Family Protein; Transcriptional Regulator Protein TetR Family; Transcriptional Regulator Protein; TetR Family Regulatory Protein; Transcriptional Regulator TetR; Tetr Family Transcriptional Regulator; Transcriptional Regulatory Protein TetR Family

Number of amino acids: Translated: 193; Mature: 193

Protein sequence:

>193_residues
MFRAVTSAHQRKKQPDVIRAQLLRAAAELVTQGGTQAVTLEAVAAHAGVTKGGLQHHFKSKQLLLDALFEEMNRQFVESF
HANIAEDPEAHGREARAYLRAMVSSPANSEQIRGLRALIGSMMVEPDLRERWNCSWQDDLQLKSGEVSPQDINSIICRLA
TDGLWFADLLEDQGIRPEVRAAVIRRLEELTRE

Sequences:

>Translated_193_residues
MFRAVTSAHQRKKQPDVIRAQLLRAAAELVTQGGTQAVTLEAVAAHAGVTKGGLQHHFKSKQLLLDALFEEMNRQFVESF
HANIAEDPEAHGREARAYLRAMVSSPANSEQIRGLRALIGSMMVEPDLRERWNCSWQDDLQLKSGEVSPQDINSIICRLA
TDGLWFADLLEDQGIRPEVRAAVIRRLEELTRE
>Mature_193_residues
MFRAVTSAHQRKKQPDVIRAQLLRAAAELVTQGGTQAVTLEAVAAHAGVTKGGLQHHFKSKQLLLDALFEEMNRQFVESF
HANIAEDPEAHGREARAYLRAMVSSPANSEQIRGLRALIGSMMVEPDLRERWNCSWQDDLQLKSGEVSPQDINSIICRLA
TDGLWFADLLEDQGIRPEVRAAVIRRLEELTRE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21637; Mature: 21637

Theoretical pI: Translated: 6.52; Mature: 6.52

Prosite motif: PS50977 HTH_TETR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFRAVTSAHQRKKQPDVIRAQLLRAAAELVTQGGTQAVTLEAVAAHAGVTKGGLQHHFKS
CCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCHHHHHHHHHH
KQLLLDALFEEMNRQFVESFHANIAEDPEAHGREARAYLRAMVSSPANSEQIRGLRALIG
HHHHHHHHHHHHHHHHHHHHHCCCCCCCHHCHHHHHHHHHHHHHCCCCHHHHHHHHHHHH
SMMVEPDLRERWNCSWQDDLQLKSGEVSPQDINSIICRLATDGLWFADLLEDQGIRPEVR
HHHCCCCHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHCCCCCHHHH
AAVIRRLEELTRE
HHHHHHHHHHHCC
>Mature Secondary Structure
MFRAVTSAHQRKKQPDVIRAQLLRAAAELVTQGGTQAVTLEAVAAHAGVTKGGLQHHFKS
CCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCHHHHHHHHHH
KQLLLDALFEEMNRQFVESFHANIAEDPEAHGREARAYLRAMVSSPANSEQIRGLRALIG
HHHHHHHHHHHHHHHHHHHHHCCCCCCCHHCHHHHHHHHHHHHHCCCCHHHHHHHHHHHH
SMMVEPDLRERWNCSWQDDLQLKSGEVSPQDINSIICRLATDGLWFADLLEDQGIRPEVR
HHHCCCCHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHCCCCCHHHH
AAVIRRLEELTRE
HHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA