| Definition | Myxococcus xanthus DK 1622 chromosome, complete genome. |
|---|---|
| Accession | NC_008095 |
| Length | 9,139,763 |
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The map label for this gene is 108762471
Identifier: 108762471
GI number: 108762471
Start: 1076336
End: 1077901
Strand: Reverse
Name: 108762471
Synonym: MXAN_0939
Alternate gene names: NA
Gene position: 1077901-1076336 (Counterclockwise)
Preceding gene: 108758126
Following gene: 108757961
Centisome position: 11.79
GC content: 67.24
Gene sequence:
>1566_bases ATGCCTGCCCTGCCTCTGACGCTGTGGGCGCTCGTCGCGTCCGCCAAGGTGTCTACTGTCGTGGTGTATCCGGACCGTGC ACAGGTCACGCGCGAAGAGACCGTGACCTGCACAGGCCCCACACGTGCCCGATTCGAGGCCGTTCCCCTCTCCGCCGTGG CCGACAGCCTCCGGGCCCACTCCGACAGTGCCACGGTGGAAGGGCTCATCACCGATGAACACTCACGCGAGGACGCCCTT CGCGAAGAGCGCACCCGGCTGGAGGCACGCCGAGACACGCTGCTGCGTGAGCGGGCTGCCCTGGGCGATGCGGCGGCGCG AGCGAACGCTCTCCAGACACTCGCGAGCGGATACACGGACGTCGCCGTGTACCGCGTCACCCATGAGATGACGTACGCGA AGCCCGACACGCGCGCATGGGCGGCCGCCTTCGACTCGGCCATGGCCGTGAGGCGGCGCGCGATGACCGAGGACCAGGAC GCCATGGCCCGACAGCGCGTGCTGGAGAAACAACTCACCGAGGTAGACACCGAACTGGAGAAACTCCGAACCGCCTCCGA ACAACGAGAGCGCCACGTCGAGGTGCGACTCTCCTGTCCCCAAGGCACCCGGGCCCGCGTGGCGCTGACGTACCTGATGG GGAACGCCAGTTGGACGCCCTCCTACGAGGCTCGTGCGAACGACAGTACCCGGACGGTGGAATTGACGACGCTGGCCACG GTGCGCCAATCCACCGGAGAGGACTGGTCGGACGCGAAGCTGGTGCTGTCCACCGCGCAGCCGCAGCGGGACGCCACCCT TCCAGAAATCCAGCCGCTGTATGTCCTGGCGGAAGAACGGCCGAAGGAGCGTCAGGTGCTGGTGCGCCGCGACGAGCAGC CACAGCACGCCAACGCTGGCGGCACCCCCACGGCGACGGTCACGAAGGGACTCGAAGCCATCCCCCAGGGGCTGTCCGTG CAGTTCGCGGCACAGGCGCGCGTGAGCATCCCCGGCGATGGCAATGCCGTGCGGATACAGGTGGCACGAACCCGATTCAA AGCCGCGTTCAACTGGCGCACCATCCCCAAGCTACACCCCGTCGTCTTCCGCGTGGCCCGCTTGAACAACGCCGCCGCGT TCCCGCTGCTGCCAGGTGATGTGGACCTCTATCGTGGCGCGGGCTTCATCGGCCGCCAGTCACTGGAGCACGTGGCGCAA GGTGCCCCCTTCGAGCTGACCTTCGGCGTGGAAGAAGGCCTGCGCGTGGAGCGCCGCGTGGTGGAGGAACTCCAGCGCCC CAAGGGCCTGTTCAAGGACACGCAGCGGTTCCGCTACGCCTACCAGTTCACGCTGAACAACCTCCGCGGGCACCCGGAAG AAGTGGAGATCTCCGAGCACTTTCCCGTGTCCGAACTGCAGGACGTGAAGGTGGCGATGGAGCCAGAGACGACGGCCGGC TACACGCTCCAGTCCAGCGACGGCATCGCAACCTGGAAGGTGACGCTGGCCCCGGGTGAGAAGCGCACCCTGGACTTCGC CTTCCACGTCGACGTCCCCTCCAGCTACGAAACGAAGGGGCTCTGA
Upstream 100 bases:
>100_bases ACCGTCCAGCAAGTCCACCGTCTCCTTCCAATACACCCTGAGCCGCCCCAAGGGCTGGCGTCTGTATCAGAAGTACCAGA ACTAGCCCGAGGACCGAACC
Downstream 100 bases:
>100_bases CGTCACGCCGGGGCATCCTGCCCCTCTCCGGGGCAATCTGCCCCGCCCAGGGTGGGACACGGCACACGCGTCCCCGAGTG AGGCACCGCCCGCGTCCGTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 521; Mature: 520
Protein sequence:
>521_residues MPALPLTLWALVASAKVSTVVVYPDRAQVTREETVTCTGPTRARFEAVPLSAVADSLRAHSDSATVEGLITDEHSREDAL REERTRLEARRDTLLRERAALGDAAARANALQTLASGYTDVAVYRVTHEMTYAKPDTRAWAAAFDSAMAVRRRAMTEDQD AMARQRVLEKQLTEVDTELEKLRTASEQRERHVEVRLSCPQGTRARVALTYLMGNASWTPSYEARANDSTRTVELTTLAT VRQSTGEDWSDAKLVLSTAQPQRDATLPEIQPLYVLAEERPKERQVLVRRDEQPQHANAGGTPTATVTKGLEAIPQGLSV QFAAQARVSIPGDGNAVRIQVARTRFKAAFNWRTIPKLHPVVFRVARLNNAAAFPLLPGDVDLYRGAGFIGRQSLEHVAQ GAPFELTFGVEEGLRVERRVVEELQRPKGLFKDTQRFRYAYQFTLNNLRGHPEEVEISEHFPVSELQDVKVAMEPETTAG YTLQSSDGIATWKVTLAPGEKRTLDFAFHVDVPSSYETKGL
Sequences:
>Translated_521_residues MPALPLTLWALVASAKVSTVVVYPDRAQVTREETVTCTGPTRARFEAVPLSAVADSLRAHSDSATVEGLITDEHSREDAL REERTRLEARRDTLLRERAALGDAAARANALQTLASGYTDVAVYRVTHEMTYAKPDTRAWAAAFDSAMAVRRRAMTEDQD AMARQRVLEKQLTEVDTELEKLRTASEQRERHVEVRLSCPQGTRARVALTYLMGNASWTPSYEARANDSTRTVELTTLAT VRQSTGEDWSDAKLVLSTAQPQRDATLPEIQPLYVLAEERPKERQVLVRRDEQPQHANAGGTPTATVTKGLEAIPQGLSV QFAAQARVSIPGDGNAVRIQVARTRFKAAFNWRTIPKLHPVVFRVARLNNAAAFPLLPGDVDLYRGAGFIGRQSLEHVAQ GAPFELTFGVEEGLRVERRVVEELQRPKGLFKDTQRFRYAYQFTLNNLRGHPEEVEISEHFPVSELQDVKVAMEPETTAG YTLQSSDGIATWKVTLAPGEKRTLDFAFHVDVPSSYETKGL >Mature_520_residues PALPLTLWALVASAKVSTVVVYPDRAQVTREETVTCTGPTRARFEAVPLSAVADSLRAHSDSATVEGLITDEHSREDALR EERTRLEARRDTLLRERAALGDAAARANALQTLASGYTDVAVYRVTHEMTYAKPDTRAWAAAFDSAMAVRRRAMTEDQDA MARQRVLEKQLTEVDTELEKLRTASEQRERHVEVRLSCPQGTRARVALTYLMGNASWTPSYEARANDSTRTVELTTLATV RQSTGEDWSDAKLVLSTAQPQRDATLPEIQPLYVLAEERPKERQVLVRRDEQPQHANAGGTPTATVTKGLEAIPQGLSVQ FAAQARVSIPGDGNAVRIQVARTRFKAAFNWRTIPKLHPVVFRVARLNNAAAFPLLPGDVDLYRGAGFIGRQSLEHVAQG APFELTFGVEEGLRVERRVVEELQRPKGLFKDTQRFRYAYQFTLNNLRGHPEEVEISEHFPVSELQDVKVAMEPETTAGY TLQSSDGIATWKVTLAPGEKRTLDFAFHVDVPSSYETKGL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Caenorhabditis elegans, GI17566996, Length=390, Percent_Identity=22.0512820512821, Blast_Score=90, Evalue=4e-18, Organism=Caenorhabditis elegans, GI17566994, Length=365, Percent_Identity=21.9178082191781, Blast_Score=86, Evalue=4e-17, Organism=Caenorhabditis elegans, GI17566992, Length=365, Percent_Identity=21.9178082191781, Blast_Score=86, Evalue=4e-17,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 57901; Mature: 57770
Theoretical pI: Translated: 6.87; Mature: 6.87
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPALPLTLWALVASAKVSTVVVYPDRAQVTREETVTCTGPTRARFEAVPLSAVADSLRAH CCCCHHHHHHHHHCCCEEEEEEECCCCCCCCCCEEEECCCCCCCEEECCHHHHHHHHHCC SDSATVEGLITDEHSREDALREERTRLEARRDTLLRERAALGDAAARANALQTLASGYTD CCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCE VAVYRVTHEMTYAKPDTRAWAAAFDSAMAVRRRAMTEDQDAMARQRVLEKQLTEVDTELE EEEEEEEHHHEECCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHH KLRTASEQRERHVEVRLSCPQGTRARVALTYLMGNASWTPSYEARANDSTRTVELTTLAT HHHHHHHHHHCEEEEEEECCCCCCCEEEEEEEECCCCCCCCCCCCCCCCCEEEEEEEHHH VRQSTGEDWSDAKLVLSTAQPQRDATLPEIQPLYVLAEERPKERQVLVRRDEQPQHANAG HHHHCCCCCCCCEEEEECCCCCCCCCCCCCCEEEEEECCCCCCHHHHEECCCCCCCCCCC GTPTATVTKGLEAIPQGLSVQFAAQARVSIPGDGNAVRIQVARTRFKAAFNWRTIPKLHP CCCHHHHHHHHHHCCCCCEEEEEEEEEEECCCCCCEEEEEEEEEHHHHHCCCCCCCCHHH VVFRVARLNNAAAFPLLPGDVDLYRGAGFIGRQSLEHVAQGAPFELTFGVEEGLRVERRV HHHHHHHCCCCCCCCCCCCCCHHHCCCCCHHHHHHHHHHCCCCEEEEECCHHCHHHHHHH VEELQRPKGLFKDTQRFRYAYQFTLNNLRGHPEEVEISEHFPVSELQDVKVAMEPETTAG HHHHHCCCCHHHHHHHHEEEEEEEEHHCCCCCCCEEECCCCCHHHHCCCEEEECCCCCCC YTLQSSDGIATWKVTLAPGEKRTLDFAFHVDVPSSYETKGL EEEECCCCEEEEEEEECCCCCCEEEEEEEECCCCCCCCCCC >Mature Secondary Structure PALPLTLWALVASAKVSTVVVYPDRAQVTREETVTCTGPTRARFEAVPLSAVADSLRAH CCCHHHHHHHHHCCCEEEEEEECCCCCCCCCCEEEECCCCCCCEEECCHHHHHHHHHCC SDSATVEGLITDEHSREDALREERTRLEARRDTLLRERAALGDAAARANALQTLASGYTD CCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCE VAVYRVTHEMTYAKPDTRAWAAAFDSAMAVRRRAMTEDQDAMARQRVLEKQLTEVDTELE EEEEEEEHHHEECCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHH KLRTASEQRERHVEVRLSCPQGTRARVALTYLMGNASWTPSYEARANDSTRTVELTTLAT HHHHHHHHHHCEEEEEEECCCCCCCEEEEEEEECCCCCCCCCCCCCCCCCEEEEEEEHHH VRQSTGEDWSDAKLVLSTAQPQRDATLPEIQPLYVLAEERPKERQVLVRRDEQPQHANAG HHHHCCCCCCCCEEEEECCCCCCCCCCCCCCEEEEEECCCCCCHHHHEECCCCCCCCCCC GTPTATVTKGLEAIPQGLSVQFAAQARVSIPGDGNAVRIQVARTRFKAAFNWRTIPKLHP CCCHHHHHHHHHHCCCCCEEEEEEEEEEECCCCCCEEEEEEEEEHHHHHCCCCCCCCHHH VVFRVARLNNAAAFPLLPGDVDLYRGAGFIGRQSLEHVAQGAPFELTFGVEEGLRVERRV HHHHHHHCCCCCCCCCCCCCCHHHCCCCCHHHHHHHHHHCCCCEEEEECCHHCHHHHHHH VEELQRPKGLFKDTQRFRYAYQFTLNNLRGHPEEVEISEHFPVSELQDVKVAMEPETTAG HHHHHCCCCHHHHHHHHEEEEEEEEHHCCCCCCCEEECCCCCHHHHCCCEEEECCCCCCC YTLQSSDGIATWKVTLAPGEKRTLDFAFHVDVPSSYETKGL EEEECCCCEEEEEEEECCCCCCEEEEEEEECCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA