| Definition | Myxococcus xanthus DK 1622 chromosome, complete genome. |
|---|---|
| Accession | NC_008095 |
| Length | 9,139,763 |
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The map label for this gene is oar [H]
Identifier: 108758126
GI number: 108758126
Start: 1077917
End: 1080028
Strand: Reverse
Name: oar [H]
Synonym: MXAN_0940
Alternate gene names: 108758126
Gene position: 1080028-1077917 (Counterclockwise)
Preceding gene: 108763077
Following gene: 108762471
Centisome position: 11.82
GC content: 65.48
Gene sequence:
>2112_bases ATGCTCATCCTCGGACTCGGGTTGATGGCAGTGGGCGTGCTGGGGGCGTCGCTCGAAGCCCCCGTCACGTCAGTCACGGT CTACAGCAACCAGGCGCAGGTGGCGCGCTCCGGCAGCCTCACGGTTTCCGGCTCGCGGCGGGTGACGTTTCCCCGGCTGC CCAAGAACGTGGATACGGATTCCATCCGCGTCGAAGCCGAGGGCGCGGAAGTGTCCCACGTCGACGTGCGCACCGTGAAG GAGGAGGCCTTCTCCCACGACGAAGCCCGGAAGCTCATCGCGCGCATGGAGGAAATTGACGCGGCGCTCGCTCGCATCAC GGCTGAACGAAACGTCCACCATGCGCAAATTGAAGCGCTCCGGCGGGTTCGTCCCTCGGCGCAGTCCGACAGCGAGGCCG CGCGCGCCCAGACTCCGCCCACCACCTGGGACGCCGCGGTGTCCTTCCTCGTGGACAACGTGGCCCGGATGGAGGCCCGG CTGCGAGAACTGGAGGCGCAATCCGCGACGCTCCAGAAGGAACAGCAGCAGCACAAGGAGCGCGCCACGACGTTGGGCAA GACGTTCGGTGAGCCCGGTGTCGAAGTGACTGCCACGCTCACGGGCAAAGGCGCCACGAAGGTGACGTTGACGTACCTCA CCACCGGGGCCCGCTGGTATCCCCACTATGAGCTGCAGTTCCAACCCGAAACGCAGCGGATGCAGATGGCCTTCTACGGC CGCGTGAGCCAGGAGACAGGCGAGGATTGGGAGAGCGCACGGCTCACGCTCAGCACCGCCCTGCCTGCCAACGCCACGGA GTTGCCCAAACTGAGCACCTGGAAGCTGGGCATCCGGGAGCGATTCATTCCCACGCCGCGTCCTCATGAAGAGTCCATTC AACCCGTGCCGGACGCTTCGAACACCCCGTCCCAGCCCACGACCTCAGCCGAGGAAATGCTGCGCGCGCAGTTGCTGCGA CTTGCCGGAGAGCGGGGCCTGACACAGCCCGCAGCCTCGAAGCCGCAGGTCACCGCGCAACGCGAACAAGGAGGGATGGG GGCCATCCGGGGTACCGTCATCGACACCCAGTCCCGGCAGACGCTCTCCGATGTGGTCGTCACCGCGATCCCCTCATCAA GGGAGGCGGAGCACGTGACGGTGACGGACGCCAAGGGTGAGTACCTCCTCCCCAGGCTCCCCTCCGAAGCCTACACCGTG CGGTACGAGCGTGAGGGCTACAAGCCCCATGCCCGCCGCCCCATCCAGATCCGTTCGAACCGCACACTCCGAGTCAATGC GGAGCTGCTTCCCGACTCTCTGAACGAGTCCGTCGAAATCGTTGGCCACCCGCCCACCATCGACGTCGGGTCCTCGACCA TGGGCGTCAACATCGATCAGGAGTTCATCAAGCGGATCCCAGGCTCCATTCAGCGGTCGATGTCACTGACCCCACCGCCT GGCTGGCGCCCCCCCACATTTGCCCCGGATTCGCCAGTCGCCGTCGCGGGAGGCTACAACCTCACCTTCACCTCACAGCA CCCGGAAACCCTCCTCAGTAACAAGGGGGAACGCAGCCTCCCGCTGGTCTCCGAGTCCTGGCCCGTGCAAGTGGAGCGCA AGATTTTCCCTGCGCTCTCGCCGAACACGTACCTCGTCGCAACGCTTCAGGGCCCATCCCGGAACGTGTTTCCAGGGGGG GATGCATCGCTCTTCGTGGGCGCCGACCCGGCCGGCACCGCGATGCTGACAACCATCGTTCCCGGGGAGTCCTTCACCCT GCCACTGGGCATCGACCGCGCGGTACGCAGCGCCCGGGACGTACGGCTCGTCGAGTCGGAGAAAGGCTTCATCTCCAAGG ATGAGGTGGGCACGTACGAAGTCACCATGGAGGTTCCCAATCCCTACCCCTTCCCCCTGGCCGTGAGCGTGGTGGACCAG CTTCCGCTCAATCAAGACGGCAAGGTGGAGGTGGCGCTGGTCCGTGCCGTGCCCGCTCCCCAGTTCGACAAGGGAACGGG GAAGCTTCAGTGGGACGTGGTGGTGCCACCGTCCAGCAAGTCCACCGTCTCCTTCCAATACACCCTGAGCCGCCCCAAGG GCTGGCGTCTGTATCAGAAGTACCAGAACTAG
Upstream 100 bases:
>100_bases CGCGGAAGTCACGCGCACTCTCCGTCGCCGGTTCCTCCGTGAGGATTTCGTGCGGGAACCATGACGTGATTGTCCATGCG TCCGTCGCCAGCATGGACGC
Downstream 100 bases:
>100_bases CCCGAGGACCGAACCATGCCTGCCCTGCCTCTGACGCTGTGGGCGCTCGTCGCGTCCGCCAAGGTGTCTACTGTCGTGGT GTATCCGGACCGTGCACAGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 703; Mature: 703
Protein sequence:
>703_residues MLILGLGLMAVGVLGASLEAPVTSVTVYSNQAQVARSGSLTVSGSRRVTFPRLPKNVDTDSIRVEAEGAEVSHVDVRTVK EEAFSHDEARKLIARMEEIDAALARITAERNVHHAQIEALRRVRPSAQSDSEAARAQTPPTTWDAAVSFLVDNVARMEAR LRELEAQSATLQKEQQQHKERATTLGKTFGEPGVEVTATLTGKGATKVTLTYLTTGARWYPHYELQFQPETQRMQMAFYG RVSQETGEDWESARLTLSTALPANATELPKLSTWKLGIRERFIPTPRPHEESIQPVPDASNTPSQPTTSAEEMLRAQLLR LAGERGLTQPAASKPQVTAQREQGGMGAIRGTVIDTQSRQTLSDVVVTAIPSSREAEHVTVTDAKGEYLLPRLPSEAYTV RYEREGYKPHARRPIQIRSNRTLRVNAELLPDSLNESVEIVGHPPTIDVGSSTMGVNIDQEFIKRIPGSIQRSMSLTPPP GWRPPTFAPDSPVAVAGGYNLTFTSQHPETLLSNKGERSLPLVSESWPVQVERKIFPALSPNTYLVATLQGPSRNVFPGG DASLFVGADPAGTAMLTTIVPGESFTLPLGIDRAVRSARDVRLVESEKGFISKDEVGTYEVTMEVPNPYPFPLAVSVVDQ LPLNQDGKVEVALVRAVPAPQFDKGTGKLQWDVVVPPSSKSTVSFQYTLSRPKGWRLYQKYQN
Sequences:
>Translated_703_residues MLILGLGLMAVGVLGASLEAPVTSVTVYSNQAQVARSGSLTVSGSRRVTFPRLPKNVDTDSIRVEAEGAEVSHVDVRTVK EEAFSHDEARKLIARMEEIDAALARITAERNVHHAQIEALRRVRPSAQSDSEAARAQTPPTTWDAAVSFLVDNVARMEAR LRELEAQSATLQKEQQQHKERATTLGKTFGEPGVEVTATLTGKGATKVTLTYLTTGARWYPHYELQFQPETQRMQMAFYG RVSQETGEDWESARLTLSTALPANATELPKLSTWKLGIRERFIPTPRPHEESIQPVPDASNTPSQPTTSAEEMLRAQLLR LAGERGLTQPAASKPQVTAQREQGGMGAIRGTVIDTQSRQTLSDVVVTAIPSSREAEHVTVTDAKGEYLLPRLPSEAYTV RYEREGYKPHARRPIQIRSNRTLRVNAELLPDSLNESVEIVGHPPTIDVGSSTMGVNIDQEFIKRIPGSIQRSMSLTPPP GWRPPTFAPDSPVAVAGGYNLTFTSQHPETLLSNKGERSLPLVSESWPVQVERKIFPALSPNTYLVATLQGPSRNVFPGG DASLFVGADPAGTAMLTTIVPGESFTLPLGIDRAVRSARDVRLVESEKGFISKDEVGTYEVTMEVPNPYPFPLAVSVVDQ LPLNQDGKVEVALVRAVPAPQFDKGTGKLQWDVVVPPSSKSTVSFQYTLSRPKGWRLYQKYQN >Mature_703_residues MLILGLGLMAVGVLGASLEAPVTSVTVYSNQAQVARSGSLTVSGSRRVTFPRLPKNVDTDSIRVEAEGAEVSHVDVRTVK EEAFSHDEARKLIARMEEIDAALARITAERNVHHAQIEALRRVRPSAQSDSEAARAQTPPTTWDAAVSFLVDNVARMEAR LRELEAQSATLQKEQQQHKERATTLGKTFGEPGVEVTATLTGKGATKVTLTYLTTGARWYPHYELQFQPETQRMQMAFYG RVSQETGEDWESARLTLSTALPANATELPKLSTWKLGIRERFIPTPRPHEESIQPVPDASNTPSQPTTSAEEMLRAQLLR LAGERGLTQPAASKPQVTAQREQGGMGAIRGTVIDTQSRQTLSDVVVTAIPSSREAEHVTVTDAKGEYLLPRLPSEAYTV RYEREGYKPHARRPIQIRSNRTLRVNAELLPDSLNESVEIVGHPPTIDVGSSTMGVNIDQEFIKRIPGSIQRSMSLTPPP GWRPPTFAPDSPVAVAGGYNLTFTSQHPETLLSNKGERSLPLVSESWPVQVERKIFPALSPNTYLVATLQGPSRNVFPGG DASLFVGADPAGTAMLTTIVPGESFTLPLGIDRAVRSARDVRLVESEKGFISKDEVGTYEVTMEVPNPYPFPLAVSVVDQ LPLNQDGKVEVALVRAVPAPQFDKGTGKLQWDVVVPPSSKSTVSFQYTLSRPKGWRLYQKYQN
Specific function: Required for cellular adhesion during fruiting body formation [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell outer membrane; Peripheral membrane protein [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Caenorhabditis elegans, GI17566996, Length=273, Percent_Identity=25.2747252747253, Blast_Score=74, Evalue=4e-13, Organism=Caenorhabditis elegans, GI71988071, Length=271, Percent_Identity=25.830258302583, Blast_Score=67, Evalue=2e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013784 - InterPro: IPR014766 - InterPro: IPR012910 - InterPro: IPR000531 [H]
Pfam domain/function: PF00593 TonB_dep_Rec [H]
EC number: NA
Molecular weight: Translated: 76970; Mature: 76970
Theoretical pI: Translated: 7.15; Mature: 7.15
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLILGLGLMAVGVLGASLEAPVTSVTVYSNQAQVARSGSLTVSGSRRVTFPRLPKNVDTD CEEEEHHHHHHHHHCCCCCCCEEEEEEECCCHHHCCCCCEEECCCCEEECCCCCCCCCCC SIRVEAEGAEVSHVDVRTVKEEAFSHDEARKLIARMEEIDAALARITAERNVHHAQIEAL EEEEEECCCEEEEEHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH RRVRPSAQSDSEAARAQTPPTTWDAAVSFLVDNVARMEARLRELEAQSATLQKEQQQHKE HHHCCCCCCCCHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RATTLGKTFGEPGVEVTATLTGKGATKVTLTYLTTGARWYPHYELQFQPETQRMQMAFYG HHHHHHHHCCCCCCEEEEEEECCCCEEEEEEEEECCCEECCCEEEEECCCHHHEEEHHHC RVSQETGEDWESARLTLSTALPANATELPKLSTWKLGIRERFIPTPRPHEESIQPVPDAS CCCHHCCCCCHHCEEEEEECCCCCCCCCCCCCEEEECHHHHCCCCCCCCCCCCCCCCCCC NTPSQPTTSAEEMLRAQLLRLAGERGLTQPAASKPQVTAQREQGGMGAIRGTVIDTQSRQ CCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEHHCCCCCCEEEEEEEECCCHH TLSDVVVTAIPSSREAEHVTVTDAKGEYLLPRLPSEAYTVRYEREGYKPHARRPIQIRSN HHHHHHEEECCCCCCCCEEEEECCCCCEECCCCCCCCEEEEEECCCCCCCCCCCEEEECC RTLRVNAELLPDSLNESVEIVGHPPTIDVGSSTMGVNIDQEFIKRIPGSIQRSMSLTPPP CEEEEEEEECCCCCCCCEEEEECCCEEECCCCEEECCCCHHHHHHCCCHHHHCCCCCCCC GWRPPTFAPDSPVAVAGGYNLTFTSQHPETLLSNKGERSLPLVSESWPVQVERKIFPALS CCCCCCCCCCCCEEEECCEEEEECCCCCHHHHCCCCCCCCCEECCCCCCEEEEEECCCCC PNTYLVATLQGPSRNVFPGGDASLFVGADPAGTAMLTTIVPGESFTLPLGIDRAVRSARD CCCEEEEEEECCCCCCCCCCCCEEEEECCCCCCEEEEEEECCCCEEEECCHHHHHHHHHC VRLVESEKGFISKDEVGTYEVTMEVPNPYPFPLAVSVVDQLPLNQDGKVEVALVRAVPAP EEEEECCCCCCCCCCCCEEEEEEECCCCCCCCHHHHHHHHCCCCCCCCEEEEEEEECCCC QFDKGTGKLQWDVVVPPSSKSTVSFQYTLSRPKGWRLYQKYQN CCCCCCCEEEEEEEECCCCCCEEEEEEEECCCCCCCHHHHHCC >Mature Secondary Structure MLILGLGLMAVGVLGASLEAPVTSVTVYSNQAQVARSGSLTVSGSRRVTFPRLPKNVDTD CEEEEHHHHHHHHHCCCCCCCEEEEEEECCCHHHCCCCCEEECCCCEEECCCCCCCCCCC SIRVEAEGAEVSHVDVRTVKEEAFSHDEARKLIARMEEIDAALARITAERNVHHAQIEAL EEEEEECCCEEEEEHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH RRVRPSAQSDSEAARAQTPPTTWDAAVSFLVDNVARMEARLRELEAQSATLQKEQQQHKE HHHCCCCCCCCHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RATTLGKTFGEPGVEVTATLTGKGATKVTLTYLTTGARWYPHYELQFQPETQRMQMAFYG HHHHHHHHCCCCCCEEEEEEECCCCEEEEEEEEECCCEECCCEEEEECCCHHHEEEHHHC RVSQETGEDWESARLTLSTALPANATELPKLSTWKLGIRERFIPTPRPHEESIQPVPDAS CCCHHCCCCCHHCEEEEEECCCCCCCCCCCCCEEEECHHHHCCCCCCCCCCCCCCCCCCC NTPSQPTTSAEEMLRAQLLRLAGERGLTQPAASKPQVTAQREQGGMGAIRGTVIDTQSRQ CCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEHHCCCCCCEEEEEEEECCCHH TLSDVVVTAIPSSREAEHVTVTDAKGEYLLPRLPSEAYTVRYEREGYKPHARRPIQIRSN HHHHHHEEECCCCCCCCEEEEECCCCCEECCCCCCCCEEEEEECCCCCCCCCCCEEEECC RTLRVNAELLPDSLNESVEIVGHPPTIDVGSSTMGVNIDQEFIKRIPGSIQRSMSLTPPP CEEEEEEEECCCCCCCCEEEEECCCEEECCCCEEECCCCHHHHHHCCCHHHHCCCCCCCC GWRPPTFAPDSPVAVAGGYNLTFTSQHPETLLSNKGERSLPLVSESWPVQVERKIFPALS CCCCCCCCCCCCEEEECCEEEEECCCCCHHHHCCCCCCCCCEECCCCCCEEEEEECCCCC PNTYLVATLQGPSRNVFPGGDASLFVGADPAGTAMLTTIVPGESFTLPLGIDRAVRSARD CCCEEEEEEECCCCCCCCCCCCEEEEECCCCCCEEEEEEECCCCEEEECCHHHHHHHHHC VRLVESEKGFISKDEVGTYEVTMEVPNPYPFPLAVSVVDQLPLNQDGKVEVALVRAVPAP EEEEECCCCCCCCCCCCEEEEEEECCCCCCCCHHHHHHHHCCCCCCCCEEEEEEEECCCC QFDKGTGKLQWDVVVPPSSKSTVSFQYTLSRPKGWRLYQKYQN CCCCCCCEEEEEEEECCCCCCEEEEEEEECCCCCCCHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8335633 [H]