| Definition | Myxococcus xanthus DK 1622 chromosome, complete genome. |
|---|---|
| Accession | NC_008095 |
| Length | 9,139,763 |
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The map label for this gene is ypiP [H]
Identifier: 108762138
GI number: 108762138
Start: 4420960
End: 4421823
Strand: Direct
Name: ypiP [H]
Synonym: MXAN_3707
Alternate gene names: 108762138
Gene position: 4420960-4421823 (Clockwise)
Preceding gene: 108763732
Following gene: 108760459
Centisome position: 48.37
GC content: 71.99
Gene sequence:
>864_bases GTGGCGTGGCGCGGAGCGTCGTGGATGGCGGAATCCGTTGCTCCTTCGCTGCGGGCATGGTGGATGCGAGGCAGGAGGGT GACCCTGGTACCGCTGGCAGTGACGACGAGCACGAAGGTGGACGCGGCGCTGGTGCGCGAGGCGCGTGCCGTGGCGGCGC GGTGGGGTGTGCCCTTCCTGCCTCGGCGCGCGAAGGAGAGCGTGGCGCCGTGGCTGGGGACGAAGGCGGCGGCGCTCTTG GTGGTGGGCGGTGACGGCGTGACGCTGTGGGACGCGGAGGGCTCGTTCGGGTTCCACGCGGGCATGGCGCACCTGCGGCG GATGCGGCTGCGGGCGGGGGAGCCGGATGCCTTCGTTCGGGTGGCGGAGCTTCGCGCCGGGGACTCGGTGCTGGACTGCA CGTTGGGGCTGGCGCAGGACGCGATGGTGGCGTCACTGGCGGTGGGGCCCTCGGGGCGCGTGGTGGGGCTGGAGCGGAGC CTGGCGCTGGGGGCGGTGGCGGGGGAGGGGCTGCGGCGCTATGCGCTGGGCGAGGACTCAGGGCTCATTGAAGTGGTGCA TGCGGATGCTCGCGAGTACCTGAAGACGTTGCCGTCGCGCGCGTTCGACGTTGTCTTCTTCGATCCGATGTTCGCGAAGC CGCGCAAGTCACAGCCGGCGTTCGACATGCTGCGCCGCTTCGCGGAACACGCGCCCCTGACGCAGGAGACGCTGGAGGAA GCCCGGCGCGTGGCGCGGCGGTGGGTGGTGGTGAAGGGCGCGAAGTACACCGACGACCTTCGCAAGCTGGGTCTGGAGGA CGAGCCCGGCTCGCGCTTCACCGACGTCATCTGGGGCCGCGTGGGGCCCTCCGTCGAGCCGTGA
Upstream 100 bases:
>100_bases GGGCGCGAATTCCTATGGAGTTCGTTAATTCGTACTAATCCTGTCGGCTCCGAGACGGAGTCTCGGCAGGGCCTTCCTCG GTTGACGCGATGGGCCAGTC
Downstream 100 bases:
>100_bases GGGCCGCTATCACGGCTGCACGGTGCCTCCCATTCGCGGCGTCCACAACAAGCCCAGGTCCAAGGGGAGGACCTCGAACG GCTCCGCGTTCACGGTGACG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 287; Mature: 286
Protein sequence:
>287_residues MAWRGASWMAESVAPSLRAWWMRGRRVTLVPLAVTTSTKVDAALVREARAVAARWGVPFLPRRAKESVAPWLGTKAAALL VVGGDGVTLWDAEGSFGFHAGMAHLRRMRLRAGEPDAFVRVAELRAGDSVLDCTLGLAQDAMVASLAVGPSGRVVGLERS LALGAVAGEGLRRYALGEDSGLIEVVHADAREYLKTLPSRAFDVVFFDPMFAKPRKSQPAFDMLRRFAEHAPLTQETLEE ARRVARRWVVVKGAKYTDDLRKLGLEDEPGSRFTDVIWGRVGPSVEP
Sequences:
>Translated_287_residues MAWRGASWMAESVAPSLRAWWMRGRRVTLVPLAVTTSTKVDAALVREARAVAARWGVPFLPRRAKESVAPWLGTKAAALL VVGGDGVTLWDAEGSFGFHAGMAHLRRMRLRAGEPDAFVRVAELRAGDSVLDCTLGLAQDAMVASLAVGPSGRVVGLERS LALGAVAGEGLRRYALGEDSGLIEVVHADAREYLKTLPSRAFDVVFFDPMFAKPRKSQPAFDMLRRFAEHAPLTQETLEE ARRVARRWVVVKGAKYTDDLRKLGLEDEPGSRFTDVIWGRVGPSVEP >Mature_286_residues AWRGASWMAESVAPSLRAWWMRGRRVTLVPLAVTTSTKVDAALVREARAVAARWGVPFLPRRAKESVAPWLGTKAAALLV VGGDGVTLWDAEGSFGFHAGMAHLRRMRLRAGEPDAFVRVAELRAGDSVLDCTLGLAQDAMVASLAVGPSGRVVGLERSL ALGAVAGEGLRRYALGEDSGLIEVVHADAREYLKTLPSRAFDVVFFDPMFAKPRKSQPAFDMLRRFAEHAPLTQETLEEA RRVARRWVVVKGAKYTDDLRKLGLEDEPGSRFTDVIWGRVGPSVEP
Specific function: Unknown
COG id: COG0500
COG function: function code QR; SAM-dependent methyltransferases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004154 - InterPro: IPR007536 [H]
Pfam domain/function: PF04445 DUF548 [H]
EC number: NA
Molecular weight: Translated: 31344; Mature: 31213
Theoretical pI: Translated: 10.43; Mature: 10.43
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAWRGASWMAESVAPSLRAWWMRGRRVTLVPLAVTTSTKVDAALVREARAVAARWGVPFL CCCCCCHHHHHHHHHHHHHHHHCCCEEEEEEEEEECCCHHHHHHHHHHHHHHHHCCCCCC PRRAKESVAPWLGTKAAALLVVGGDGVTLWDAEGSFGFHAGMAHLRRMRLRAGEPDAFVR CCHHHHHHCCCCCCCEEEEEEECCCCEEEEECCCCCCHHHHHHHHHHHHHCCCCCHHHEE VAELRAGDSVLDCTLGLAQDAMVASLAVGPSGRVVGLERSLALGAVAGEGLRRYALGEDS EEHHCCCCCHHHHHHHHHHHHHHHHEEECCCCCEEEECHHHHHHHHHHHHHHHHHCCCCC GLIEVVHADAREYLKTLPSRAFDVVFFDPMFAKPRKSQPAFDMLRRFAEHAPLTQETLEE CEEEEEHHHHHHHHHHCCCHHEEEEEECCCCCCCCCCCCHHHHHHHHHHHCCCCHHHHHH ARRVARRWVVVKGAKYTDDLRKLGLEDEPGSRFTDVIWGRVGPSVEP HHHHHHHEEEEECCCCHHHHHHCCCCCCCCCHHHHHHHHCCCCCCCC >Mature Secondary Structure AWRGASWMAESVAPSLRAWWMRGRRVTLVPLAVTTSTKVDAALVREARAVAARWGVPFL CCCCCHHHHHHHHHHHHHHHHCCCEEEEEEEEEECCCHHHHHHHHHHHHHHHHCCCCCC PRRAKESVAPWLGTKAAALLVVGGDGVTLWDAEGSFGFHAGMAHLRRMRLRAGEPDAFVR CCHHHHHHCCCCCCCEEEEEEECCCCEEEEECCCCCCHHHHHHHHHHHHHCCCCCHHHEE VAELRAGDSVLDCTLGLAQDAMVASLAVGPSGRVVGLERSLALGAVAGEGLRRYALGEDS EEHHCCCCCHHHHHHHHHHHHHHHHEEECCCCCEEEECHHHHHHHHHHHHHHHHHCCCCC GLIEVVHADAREYLKTLPSRAFDVVFFDPMFAKPRKSQPAFDMLRRFAEHAPLTQETLEE CEEEEEHHHHHHHHHHCCCHHEEEEEECCCCCCCCCCCCHHHHHHHHHHHCCCCHHHHHH ARRVARRWVVVKGAKYTDDLRKLGLEDEPGSRFTDVIWGRVGPSVEP HHHHHHHEEEEECCCCHHHHHHCCCCCCCCCHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9384377 [H]