| Definition | Myxococcus xanthus DK 1622 chromosome, complete genome. |
|---|---|
| Accession | NC_008095 |
| Length | 9,139,763 |
Click here to switch to the map view.
The map label for this gene is macB [H]
Identifier: 108761237
GI number: 108761237
Start: 125263
End: 126480
Strand: Direct
Name: macB [H]
Synonym: MXAN_0108
Alternate gene names: 108761237
Gene position: 125263-126480 (Clockwise)
Preceding gene: 108762317
Following gene: 108757767
Centisome position: 1.37
GC content: 67.73
Gene sequence:
>1218_bases ATGGCAATCTGGGACACCCTGCGGCTGGCGTTCGGAACGTTCCGTTCCAACCTGCTGCGCTCCTTCCTGACGCTGCTGGG CATCGTCATTGGCGCCACCACGGTGGTGTCGATGATGGGGCTCATCGAGGGCCTGCGCATCCAGGTGAACGAGAGCATGT CCGAGCTGGGCTCCGACTGCTTCCAGGTGCAGCGGCTGCCCTTCGGCGGCAACCTGTCCCTGGCGGAGCTGGCGCGGCGG CCCCGGCTGAACGAGGGCGACTTGGAGGCCATCCGGCTGCAGCCGTCGGTGCTGCTGGCGGCGGCGGAGGACTCCAAGGG TGGACAGAAGGTGTCCACGCAGCAGCGCGAGTCGCGTCCCAATGTGGTCATCTGGGCCGGCACGCCGGAGTACTTCCAGA CGAACTCGGTGGTGGTGGAGTTCGGGCGGCCCTTCACGGACGCGGAGTACCTGGATGGCCGCCGCGTGGCGGTGATTGGC CAGGACCTGGCGGACACGTTGTTCCCGGGCGTGCAGCCCTTGGGGCAGAACATCCGCATCCTGGGGCGCAGCTTCCAGGT GATTGGCACGCTCAAGCGCCGCGGCAGCTTCATGGGTGGAGGCAGCCAGGACAACCAGGTGATGATGCCGCTGTCCGTCT ACAAGGCGCTGTTCGGGGTGCGCAACTACCGGGTGAGCGTCCAGGCCCAGTCGGCGGAGGTGCTCCAGCGCGCGCAGGAC GAGGTGACGCTGCTGATGCGGCGGCGCCACAACCTGAAGCCGTTGGAGGAGGATGACTTCTTCGTGTTCTCCAACGAGAG CGCCACGGAGATGTTCAACAACATCTCGAAGGTGATTTCTGCGGCCAGCTTCGGCGTGTGCATGCTGTCGCTGCTGGTGG GCGGCATCGGCATCCTGAACATCATGCTGGTGGCGGTGACGGAGCGCACCCGGGAGATTGGCATCCGCAAGGCGCTGGGC GCGAAGAGGCGCCGCATCCTCGCGCAGTTCGCCATCGAGGCGGTGGTGCTGTCGCTGGTGGGGGGCGCGTTGGGCGTGGG CCTGGGCATGGGCCTGGCGCAACTGGCGAAGTGGATGGTGGGGCTTCCCGCGCAGGTGCCGGCCTGGGCGGTGATGCTGT CGCTGGCCATGAGCAGCGGCGTGGGCCTGCTGTTCGGCATCTACCCGGCCGCGCGCGCCGCGAAGCTGGACCCCGTGGAG GCCATGCGGACGGACTGA
Upstream 100 bases:
>100_bases GTGGGGCTGCTGTTCGGCATCTGGCCGGCGGCGCGGGCGGCGAACCTGGACCCGGTGGAAGCGCTTCGCCACGAGTGACG GACGGGAGACGGCGGCGATG
Downstream 100 bases:
>100_bases CCCCACGCAGGTGCCGCAGGGTGGCTGGGAATGAAACGGGGCCTCCTCCGCGCGGTGCGGAAGAGGCCCCAGGTGTTTCA GCACGTGTGTCCGGGGATTA
Product: putative ABC transporter permease
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 405; Mature: 404
Protein sequence:
>405_residues MAIWDTLRLAFGTFRSNLLRSFLTLLGIVIGATTVVSMMGLIEGLRIQVNESMSELGSDCFQVQRLPFGGNLSLAELARR PRLNEGDLEAIRLQPSVLLAAAEDSKGGQKVSTQQRESRPNVVIWAGTPEYFQTNSVVVEFGRPFTDAEYLDGRRVAVIG QDLADTLFPGVQPLGQNIRILGRSFQVIGTLKRRGSFMGGGSQDNQVMMPLSVYKALFGVRNYRVSVQAQSAEVLQRAQD EVTLLMRRRHNLKPLEEDDFFVFSNESATEMFNNISKVISAASFGVCMLSLLVGGIGILNIMLVAVTERTREIGIRKALG AKRRRILAQFAIEAVVLSLVGGALGVGLGMGLAQLAKWMVGLPAQVPAWAVMLSLAMSSGVGLLFGIYPAARAAKLDPVE AMRTD
Sequences:
>Translated_405_residues MAIWDTLRLAFGTFRSNLLRSFLTLLGIVIGATTVVSMMGLIEGLRIQVNESMSELGSDCFQVQRLPFGGNLSLAELARR PRLNEGDLEAIRLQPSVLLAAAEDSKGGQKVSTQQRESRPNVVIWAGTPEYFQTNSVVVEFGRPFTDAEYLDGRRVAVIG QDLADTLFPGVQPLGQNIRILGRSFQVIGTLKRRGSFMGGGSQDNQVMMPLSVYKALFGVRNYRVSVQAQSAEVLQRAQD EVTLLMRRRHNLKPLEEDDFFVFSNESATEMFNNISKVISAASFGVCMLSLLVGGIGILNIMLVAVTERTREIGIRKALG AKRRRILAQFAIEAVVLSLVGGALGVGLGMGLAQLAKWMVGLPAQVPAWAVMLSLAMSSGVGLLFGIYPAARAAKLDPVE AMRTD >Mature_404_residues AIWDTLRLAFGTFRSNLLRSFLTLLGIVIGATTVVSMMGLIEGLRIQVNESMSELGSDCFQVQRLPFGGNLSLAELARRP RLNEGDLEAIRLQPSVLLAAAEDSKGGQKVSTQQRESRPNVVIWAGTPEYFQTNSVVVEFGRPFTDAEYLDGRRVAVIGQ DLADTLFPGVQPLGQNIRILGRSFQVIGTLKRRGSFMGGGSQDNQVMMPLSVYKALFGVRNYRVSVQAQSAEVLQRAQDE VTLLMRRRHNLKPLEEDDFFVFSNESATEMFNNISKVISAASFGVCMLSLLVGGIGILNIMLVAVTERTREIGIRKALGA KRRRILAQFAIEAVVLSLVGGALGVGLGMGLAQLAKWMVGLPAQVPAWAVMLSLAMSSGVGLLFGIYPAARAAKLDPVEA MRTD
Specific function: Part of the ABC transporter complex MacAB involved in macrolide export. Transmembrane domains (TMD) form a pore in the inner membrane and the ATP-binding domain (NBD) is responsible for energy generation [H]
COG id: COG0577
COG function: function code V; ABC-type antimicrobial peptide transport system, permease component
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transporter domain [H]
Homologues:
Organism=Escherichia coli, GI1787105, Length=407, Percent_Identity=32.4324324324324, Blast_Score=148, Evalue=7e-37,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003439 - InterPro: IPR017871 - InterPro: IPR017911 - InterPro: IPR003593 - InterPro: IPR003838 [H]
Pfam domain/function: PF00005 ABC_tran; PF02687 FtsX [H]
EC number: NA
Molecular weight: Translated: 44022; Mature: 43891
Theoretical pI: Translated: 10.07; Mature: 10.07
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 4.0 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAIWDTLRLAFGTFRSNLLRSFLTLLGIVIGATTVVSMMGLIEGLRIQVNESMSELGSDC CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECHHHHHHCHHH FQVQRLPFGGNLSLAELARRPRLNEGDLEAIRLQPSVLLAAAEDSKGGQKVSTQQRESRP HHHHCCCCCCCCCHHHHHHCCCCCCCCCCEEEECCCEEEEECCCCCCCCCCCHHHHHCCC NVVIWAGTPEYFQTNSVVVEFGRPFTDAEYLDGRRVAVIGQDLADTLFPGVQPLGQNIRI CEEEECCCCCHHCCCCEEEECCCCCCCHHHCCCCEEEEECCHHHHHHCCCCHHCCCCHHH LGRSFQVIGTLKRRGSFMGGGSQDNQVMMPLSVYKALFGVRNYRVSVQAQSAEVLQRAQD HHHHHHHHHHHHHCCCCCCCCCCCCEEECHHHHHHHHHHHHCEEEEEEEHHHHHHHHHHH EVTLLMRRRHNLKPLEEDDFFVFSNESATEMFNNISKVISAASFGVCMLSLLVGGIGILN HHHHHHHHHCCCCCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IMLVAVTERTREIGIRKALGAKRRRILAQFAIEAVVLSLVGGALGVGLGMGLAQLAKWMV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GLPAQVPAWAVMLSLAMSSGVGLLFGIYPAARAAKLDPVEAMRTD CCCCCCHHHHHHHHHHHHCCCCEEHHHHHHHHCCCCCCHHHHCCC >Mature Secondary Structure AIWDTLRLAFGTFRSNLLRSFLTLLGIVIGATTVVSMMGLIEGLRIQVNESMSELGSDC CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECHHHHHHCHHH FQVQRLPFGGNLSLAELARRPRLNEGDLEAIRLQPSVLLAAAEDSKGGQKVSTQQRESRP HHHHCCCCCCCCCHHHHHHCCCCCCCCCCEEEECCCEEEEECCCCCCCCCCCHHHHHCCC NVVIWAGTPEYFQTNSVVVEFGRPFTDAEYLDGRRVAVIGQDLADTLFPGVQPLGQNIRI CEEEECCCCCHHCCCCEEEECCCCCCCHHHCCCCEEEEECCHHHHHHCCCCHHCCCCHHH LGRSFQVIGTLKRRGSFMGGGSQDNQVMMPLSVYKALFGVRNYRVSVQAQSAEVLQRAQD HHHHHHHHHHHHHCCCCCCCCCCCCEEECHHHHHHHHHHHHCEEEEEEEHHHHHHHHHHH EVTLLMRRRHNLKPLEEDDFFVFSNESATEMFNNISKVISAASFGVCMLSLLVGGIGILN HHHHHHHHHCCCCCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IMLVAVTERTREIGIRKALGAKRRRILAQFAIEAVVLSLVGGALGVGLGMGLAQLAKWMV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GLPAQVPAWAVMLSLAMSSGVGLLFGIYPAARAAKLDPVEAMRTD CCCCCCHHHHHHHHHHHHCCCCEEHHHHHHHHCCCCCCHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA