| Definition | Myxococcus xanthus DK 1622 chromosome, complete genome. |
|---|---|
| Accession | NC_008095 |
| Length | 9,139,763 |
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The map label for this gene is pkn1 [H]
Identifier: 108761219
GI number: 108761219
Start: 826731
End: 827777
Strand: Direct
Name: pkn1 [H]
Synonym: MXAN_0724
Alternate gene names: 108761219
Gene position: 826731-827777 (Clockwise)
Preceding gene: 108762229
Following gene: 108763857
Centisome position: 9.05
GC content: 72.87
Gene sequence:
>1047_bases ATGTCCCGGTCGGACGTCACCACCTCCGTTCCCGTGTTCACCCAGACCTTCCGGTCCCCGTGTGGCTGTGTCCCCGCGCA CGGGGGGGCCTGCGAGTGTCCGGCCCGGGCGGGCGCGCGTCGTGTGTCCATGGGGTGTCCGCCATCCTTCATGGTGCCGC CCGCGAGGGAGGCCCCGCTCCCGTCCTCGGCGGCCTCGCTGGTGGGACAGCAGGTGGGCCACTTCCGGCTGCTGCGAGAG CTGGGCCGGGGGAGCCTGGGCGTCGTGCTGCTCGCGGAGCACGCGCTCATCCAGAAGCGCGTGGCCATCCAGGTGCTTCA CACGCACGTGACGCAGGACCCGGCGCAGGTCGCTCGGTTCCTTCAGGCGGCGCGCACGCTGACGCTCATCCAGCACGCGC ACATCGTTTCGCTCTACGACCTGGGCATGCGCGACGGGCGTCCCTACCTCGTCAGGGAGTACCTGGAGGGACAGAGCCTG ACCGCCTTCGCGAAGGGGCCGCTGGCGTCCGCGCTGGTGGTGGACCTGCTCACCCAGGTGTGTGACGCGCTGGGCGCCGC GCATGCGCACGGCATCGCCCACGGCAGTCTCAATCCCGCCAGCATCTTCCTCATCCCCGATGCGAATGGCCGCCAGCACG TGAAGCTGCTGGACTTCGGCATCGCCGGGTTGCTCCCTTCCCCCGATGGCGCCGCCGACCTGTCGGTGGCCGCTGACCTC TTCGCCGTGGGCGTGCTGGGCGCGCTGCTGGTCTCGGGCCGGCTGTCCTCGCGCGGGCACGCGGCGGAGGAGCCGCCCCA TGGCCACGCTCGGGAGGTGCCACCGCTGCCGGCGGGCATCCCGTCGGCGCTGTCACGCGTGCTGCTCAAGGCCATGGCGC GCCGCCCGGGGGACCGTTATGCCAGTGCGGCCGAGCTGCGCGCGGCATTGCAGGCGTCGGTGGCGCTCGACGGCGGCGTG GCGCATCCAGAGGCCCTGGAGCTGGAGCGGCTTCCCAGTTGGTACACGCTCCGGGGGCCGCCGGGGGCCGCGCCCGCCTC CAGGTAG
Upstream 100 bases:
>100_bases CTGTCACATCTTCCGAAACCCATTTCGCGCTGGCTCGTGCGTGGGCCCACTGGCTGCTGGCCGGAGCGGGGGCGCCTGTC GCGCGAAGGACGTTGGCATC
Downstream 100 bases:
>100_bases GGCGGCCTGGCTGTCTCGGCGGGGCGTCATGCCTTGCGTCTGGCGGGGCCCTCCTCGTTAATCCACTTCAGCTCCCATGG CCTCCGACCCCGACGACAAG
Product: putative serine/threonine protein kinase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 348; Mature: 347
Protein sequence:
>348_residues MSRSDVTTSVPVFTQTFRSPCGCVPAHGGACECPARAGARRVSMGCPPSFMVPPAREAPLPSSAASLVGQQVGHFRLLRE LGRGSLGVVLLAEHALIQKRVAIQVLHTHVTQDPAQVARFLQAARTLTLIQHAHIVSLYDLGMRDGRPYLVREYLEGQSL TAFAKGPLASALVVDLLTQVCDALGAAHAHGIAHGSLNPASIFLIPDANGRQHVKLLDFGIAGLLPSPDGAADLSVAADL FAVGVLGALLVSGRLSSRGHAAEEPPHGHAREVPPLPAGIPSALSRVLLKAMARRPGDRYASAAELRAALQASVALDGGV AHPEALELERLPSWYTLRGPPGAAPASR
Sequences:
>Translated_348_residues MSRSDVTTSVPVFTQTFRSPCGCVPAHGGACECPARAGARRVSMGCPPSFMVPPAREAPLPSSAASLVGQQVGHFRLLRE LGRGSLGVVLLAEHALIQKRVAIQVLHTHVTQDPAQVARFLQAARTLTLIQHAHIVSLYDLGMRDGRPYLVREYLEGQSL TAFAKGPLASALVVDLLTQVCDALGAAHAHGIAHGSLNPASIFLIPDANGRQHVKLLDFGIAGLLPSPDGAADLSVAADL FAVGVLGALLVSGRLSSRGHAAEEPPHGHAREVPPLPAGIPSALSRVLLKAMARRPGDRYASAAELRAALQASVALDGGV AHPEALELERLPSWYTLRGPPGAAPASR >Mature_347_residues SRSDVTTSVPVFTQTFRSPCGCVPAHGGACECPARAGARRVSMGCPPSFMVPPAREAPLPSSAASLVGQQVGHFRLLREL GRGSLGVVLLAEHALIQKRVAIQVLHTHVTQDPAQVARFLQAARTLTLIQHAHIVSLYDLGMRDGRPYLVREYLEGQSLT AFAKGPLASALVVDLLTQVCDALGAAHAHGIAHGSLNPASIFLIPDANGRQHVKLLDFGIAGLLPSPDGAADLSVAADLF AVGVLGALLVSGRLSSRGHAAEEPPHGHAREVPPLPAGIPSALSRVLLKAMARRPGDRYASAAELRAALQASVALDGGVA HPEALELERLPSWYTLRGPPGAAPASR
Specific function: Plays an essential role in proper timing of early development events [H]
COG id: COG0515
COG function: function code RTKL; Serine/threonine protein kinase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 TPR repeat [H]
Homologues:
Organism=Homo sapiens, GI24308326, Length=157, Percent_Identity=28.6624203821656, Blast_Score=80, Evalue=2e-15, Organism=Homo sapiens, GI193083127, Length=226, Percent_Identity=26.9911504424779, Blast_Score=80, Evalue=3e-15, Organism=Homo sapiens, GI116089335, Length=157, Percent_Identity=29.2993630573248, Blast_Score=80, Evalue=3e-15, Organism=Homo sapiens, GI193083125, Length=226, Percent_Identity=26.9911504424779, Blast_Score=80, Evalue=3e-15, Organism=Homo sapiens, GI46852166, Length=226, Percent_Identity=26.9911504424779, Blast_Score=80, Evalue=3e-15, Organism=Homo sapiens, GI193083129, Length=226, Percent_Identity=26.9911504424779, Blast_Score=80, Evalue=3e-15, Organism=Homo sapiens, GI33636756, Length=226, Percent_Identity=26.9911504424779, Blast_Score=79, Evalue=7e-15, Organism=Homo sapiens, GI86990441, Length=214, Percent_Identity=25.7009345794392, Blast_Score=75, Evalue=7e-14, Organism=Homo sapiens, GI254028234, Length=214, Percent_Identity=25.7009345794392, Blast_Score=75, Evalue=7e-14, Organism=Homo sapiens, GI153791472, Length=226, Percent_Identity=25.2212389380531, Blast_Score=75, Evalue=7e-14, Organism=Homo sapiens, GI254028237, Length=249, Percent_Identity=24.4979919678715, Blast_Score=75, Evalue=8e-14, Organism=Homo sapiens, GI254028240, Length=249, Percent_Identity=24.4979919678715, Blast_Score=75, Evalue=8e-14, Organism=Homo sapiens, GI254028232, Length=214, Percent_Identity=25.7009345794392, Blast_Score=75, Evalue=8e-14, Organism=Homo sapiens, GI46877068, Length=205, Percent_Identity=24.8780487804878, Blast_Score=75, Evalue=1e-13, Organism=Homo sapiens, GI94557301, Length=205, Percent_Identity=24.390243902439, Blast_Score=72, Evalue=8e-13, Organism=Caenorhabditis elegans, GI133901970, Length=254, Percent_Identity=25.5905511811024, Blast_Score=83, Evalue=2e-16, Organism=Caenorhabditis elegans, GI133901968, Length=252, Percent_Identity=25.3968253968254, Blast_Score=83, Evalue=2e-16, Organism=Caenorhabditis elegans, GI17568289, Length=252, Percent_Identity=23.4126984126984, Blast_Score=80, Evalue=1e-15, Organism=Caenorhabditis elegans, GI25152839, Length=161, Percent_Identity=24.8447204968944, Blast_Score=75, Evalue=5e-14, Organism=Caenorhabditis elegans, GI25152842, Length=161, Percent_Identity=24.8447204968944, Blast_Score=75, Evalue=5e-14, Organism=Caenorhabditis elegans, GI71995452, Length=184, Percent_Identity=24.4565217391304, Blast_Score=75, Evalue=6e-14, Organism=Caenorhabditis elegans, GI193208263, Length=213, Percent_Identity=24.8826291079812, Blast_Score=74, Evalue=9e-14, Organism=Caenorhabditis elegans, GI193204599, Length=267, Percent_Identity=26.2172284644195, Blast_Score=74, Evalue=1e-13, Organism=Caenorhabditis elegans, GI17538163, Length=159, Percent_Identity=30.188679245283, Blast_Score=72, Evalue=3e-13, Organism=Saccharomyces cerevisiae, GI6320685, Length=186, Percent_Identity=26.3440860215054, Blast_Score=75, Evalue=2e-14, Organism=Saccharomyces cerevisiae, GI6319825, Length=212, Percent_Identity=26.4150943396226, Blast_Score=72, Evalue=2e-13, Organism=Drosophila melanogaster, GI45550626, Length=159, Percent_Identity=30.188679245283, Blast_Score=83, Evalue=3e-16, Organism=Drosophila melanogaster, GI45553923, Length=184, Percent_Identity=26.6304347826087, Blast_Score=78, Evalue=9e-15, Organism=Drosophila melanogaster, GI24639066, Length=184, Percent_Identity=26.6304347826087, Blast_Score=78, Evalue=9e-15, Organism=Drosophila melanogaster, GI17137472, Length=184, Percent_Identity=26.6304347826087, Blast_Score=78, Evalue=9e-15, Organism=Drosophila melanogaster, GI24643817, Length=244, Percent_Identity=26.6393442622951, Blast_Score=73, Evalue=3e-13, Organism=Drosophila melanogaster, GI45550904, Length=230, Percent_Identity=26.5217391304348, Blast_Score=72, Evalue=6e-13, Organism=Drosophila melanogaster, GI45550091, Length=230, Percent_Identity=26.5217391304348, Blast_Score=72, Evalue=6e-13, Organism=Drosophila melanogaster, GI161077232, Length=168, Percent_Identity=27.3809523809524, Blast_Score=69, Evalue=6e-12, Organism=Drosophila melanogaster, GI161077230, Length=168, Percent_Identity=27.3809523809524, Blast_Score=69, Evalue=6e-12, Organism=Drosophila melanogaster, GI24655167, Length=168, Percent_Identity=27.3809523809524, Blast_Score=69, Evalue=6e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011009 - InterPro: IPR009875 - InterPro: IPR000719 - InterPro: IPR017441 - InterPro: IPR017442 - InterPro: IPR008271 - InterPro: IPR013026 - InterPro: IPR011990 - InterPro: IPR019734 [H]
Pfam domain/function: PF07238 PilZ; PF00069 Pkinase [H]
EC number: =2.7.11.1 [H]
Molecular weight: Translated: 36331; Mature: 36200
Theoretical pI: Translated: 8.84; Mature: 8.84
Prosite motif: PS50011 PROTEIN_KINASE_DOM
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSRSDVTTSVPVFTQTFRSPCGCVPAHGGACECPARAGARRVSMGCPPSFMVPPAREAPL CCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCHHHCCCCEEECCCCCCCCCCCCCCCCC PSSAASLVGQQVGHFRLLRELGRGSLGVVLLAEHALIQKRVAIQVLHTHVTQDPAQVARF CHHHHHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH LQAARTLTLIQHAHIVSLYDLGMRDGRPYLVREYLEGQSLTAFAKGPLASALVVDLLTQV HHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCEEEHHCCCHHHHHHHHHHHHH CDALGAAHAHGIAHGSLNPASIFLIPDANGRQHVKLLDFGIAGLLPSPDGAADLSVAADL HHHHHHHHHHCCCCCCCCCEEEEEEECCCCCCEEEEEEHHHHHCCCCCCCCCHHHHHHHH FAVGVLGALLVSGRLSSRGHAAEEPPHGHAREVPPLPAGIPSALSRVLLKAMARRPGDRY HHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCHHH ASAAELRAALQASVALDGGVAHPEALELERLPSWYTLRGPPGAAPASR HHHHHHHHHHHHHHHCCCCCCCCHHHHHHHCCCEEEECCCCCCCCCCC >Mature Secondary Structure SRSDVTTSVPVFTQTFRSPCGCVPAHGGACECPARAGARRVSMGCPPSFMVPPAREAPL CCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCHHHCCCCEEECCCCCCCCCCCCCCCCC PSSAASLVGQQVGHFRLLRELGRGSLGVVLLAEHALIQKRVAIQVLHTHVTQDPAQVARF CHHHHHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH LQAARTLTLIQHAHIVSLYDLGMRDGRPYLVREYLEGQSLTAFAKGPLASALVVDLLTQV HHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCEEEHHCCCHHHHHHHHHHHHH CDALGAAHAHGIAHGSLNPASIFLIPDANGRQHVKLLDFGIAGLLPSPDGAADLSVAADL HHHHHHHHHHCCCCCCCCCEEEEEEECCCCCCEEEEEEHHHHHCCCCCCCCCHHHHHHHH FAVGVLGALLVSGRLSSRGHAAEEPPHGHAREVPPLPAGIPSALSRVLLKAMARRPGDRY HHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCHHH ASAAELRAALQASVALDGGVAHPEALELERLPSWYTLRGPPGAAPASR HHHHHHHHHHHHHHHCCCCCCCCHHHHHHHCCCEEEECCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 1835671 [H]