| Definition | Myxococcus xanthus DK 1622 chromosome, complete genome. |
|---|---|
| Accession | NC_008095 |
| Length | 9,139,763 |
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The map label for this gene is 108760713
Identifier: 108760713
GI number: 108760713
Start: 5814791
End: 5816260
Strand: Reverse
Name: 108760713
Synonym: MXAN_4634
Alternate gene names: NA
Gene position: 5816260-5814791 (Counterclockwise)
Preceding gene: 108761800
Following gene: 108757628
Centisome position: 63.64
GC content: 71.16
Gene sequence:
>1470_bases GTGCGGGCGCGTGGGCTTTTCAGGGGTGCCACCATGGACGCCGAGCACAGGGTTGATGGACAGGATGGGACGGCGGGTGC TGGGCCCGAAGGTGGCTCGCAGGCGCCGTCCGGGCAGGACGGCGGCCAGGGCGGTGCCGTGAGCGCCGAGCTGCACGCTT CGGGGGGCCCCTCGGGGCCGCAGGGCGAGCACAGGCGCGAGGACGCGTCACCGGAGTCCGGTGGTGAGCACCGAGCCGAG GGCACGCCCCCCGCCGAAGGTTCAGAACAGCGAGCTGAGGGCACGCCTGCCGCCGAAGGTTCGGAGCAGCGAGCCGAGGG CAAGCCTTCCGAGCAGGGCGTTGCGCAGCGCGCCGAGGACACGCCTTCGGAACAAGGCGAGCCCCAGAACGCCGGCTCTG CACAGGGGCAGGGCGGTGAGCCTCCTGTCGCCAGTGGCGACACTCAGGGTGAGGGCGAACGGCCGCACAACGCGGGCGGG GAAGCGCCGGGCTCCGCGGACGCCTCCGGAAGCGAAGGTTCGAAGGACCAGGCAGGTTCGCAGGAAGGTGGACTGCAGGC CGAGGGCACCACGTCCCAGGGGCAGGCAGAGCCACCTGCCAAGGATGCGTCTCATGCGCAGGGCGAGCACCAGGCCGTGA GTGATTCCCACGGGCAGGACGGAAGCGAATCGGGAGGCAGGTCCGTCGCCAACGAGGAGGCGCGCGCCGAGCAGTCCCCC TCCGACGGCGAGGCCCGTGTCACGCCCGGGCTGGACGAGCGCCCGCAAGGCGCGTTCTGGACGGGGGAGGCCGACGGGGA CAAATCCGGCGACTCTGACGAGGCGTCGCGGGAGGACGTCCTCCCCGAACCCGAGCAGCGGCTTTCGGGCCGGGTGACGA CGGTGCTCCTGCCGCTGGAGAAGCTGCAGGACGAAAGCGCGTTCAAGCTTCGCCCGGAAGGCGACGTGTCGGGGCTGGCC ACGGACATCGCGCGGCTGGGGCAGTTGTTCCCGGTGGACGTCCGCCCGGCGGGGGAAGACCGCTACCAACTCGTCTGTGG CTTCCGGCGGGTCGCTGCGCTGCGCTTCCTCAAGCGGGACGCCGTGCAGGCGCGGATCCACTTGCGGCTCTCGGACGAGG ACGCGCTGGTGATGTCGCTGGCGGAGGCGATTCACGCCACGCCGGTGGGCCCGGAAGTCCTGGAGGCGAAGCGCGACGAG CTCGAGGCGCAGGGGCGCTTGAGCGCGGCCGTGCGCGACATGCTGGAGAAGGCGCTCGCCACTGAGGACACACTGGCGCC GGAGGGCGTCGAAGAGGAGATTGACGCCGACGAGCTGGCGCAGGAAGTGGCGCAGCGGCTTGGGGCCATCAATCAAGACC TCTCGCTGCTGGCGGACGTGTTCGCCGCGCTGGATGAGTCGCGCAAGGCGGAGCTCCTGATGCAGCTCCGCTACTCGTCC GAGCTGGTCACCTATCTGGAGGGGCTGTAA
Upstream 100 bases:
>100_bases CCGCCAACGCCAGTCCTGGTGGGTGCTGGCGCGAAGAAGAAGGTCGTGGTGAAGAAGAAGACCCGCTAGCGCGCACCGCC CGCGCCGCCAGTCGTTGGCG
Downstream 100 bases:
>100_bases GCCATGGCGGAACCTCTCGTGCGCGACCGTGCCCGGCTGTTGGAGCTGCTCACCGAGCGCTCCTTCGAGCAGCGCCGCGT GGTGCTCTCGTCCGGCAAGG
Product: ParB-like nuclease domain-containing protein
Products: NA
Alternate protein names: Nuclease; ParB-Like Nuclease Domain-Containing Protein; Parb-Like Nuclease Domain Protein
Number of amino acids: Translated: 489; Mature: 489
Protein sequence:
>489_residues MRARGLFRGATMDAEHRVDGQDGTAGAGPEGGSQAPSGQDGGQGGAVSAELHASGGPSGPQGEHRREDASPESGGEHRAE GTPPAEGSEQRAEGTPAAEGSEQRAEGKPSEQGVAQRAEDTPSEQGEPQNAGSAQGQGGEPPVASGDTQGEGERPHNAGG EAPGSADASGSEGSKDQAGSQEGGLQAEGTTSQGQAEPPAKDASHAQGEHQAVSDSHGQDGSESGGRSVANEEARAEQSP SDGEARVTPGLDERPQGAFWTGEADGDKSGDSDEASREDVLPEPEQRLSGRVTTVLLPLEKLQDESAFKLRPEGDVSGLA TDIARLGQLFPVDVRPAGEDRYQLVCGFRRVAALRFLKRDAVQARIHLRLSDEDALVMSLAEAIHATPVGPEVLEAKRDE LEAQGRLSAAVRDMLEKALATEDTLAPEGVEEEIDADELAQEVAQRLGAINQDLSLLADVFAALDESRKAELLMQLRYSS ELVTYLEGL
Sequences:
>Translated_489_residues MRARGLFRGATMDAEHRVDGQDGTAGAGPEGGSQAPSGQDGGQGGAVSAELHASGGPSGPQGEHRREDASPESGGEHRAE GTPPAEGSEQRAEGTPAAEGSEQRAEGKPSEQGVAQRAEDTPSEQGEPQNAGSAQGQGGEPPVASGDTQGEGERPHNAGG EAPGSADASGSEGSKDQAGSQEGGLQAEGTTSQGQAEPPAKDASHAQGEHQAVSDSHGQDGSESGGRSVANEEARAEQSP SDGEARVTPGLDERPQGAFWTGEADGDKSGDSDEASREDVLPEPEQRLSGRVTTVLLPLEKLQDESAFKLRPEGDVSGLA TDIARLGQLFPVDVRPAGEDRYQLVCGFRRVAALRFLKRDAVQARIHLRLSDEDALVMSLAEAIHATPVGPEVLEAKRDE LEAQGRLSAAVRDMLEKALATEDTLAPEGVEEEIDADELAQEVAQRLGAINQDLSLLADVFAALDESRKAELLMQLRYSS ELVTYLEGL >Mature_489_residues MRARGLFRGATMDAEHRVDGQDGTAGAGPEGGSQAPSGQDGGQGGAVSAELHASGGPSGPQGEHRREDASPESGGEHRAE GTPPAEGSEQRAEGTPAAEGSEQRAEGKPSEQGVAQRAEDTPSEQGEPQNAGSAQGQGGEPPVASGDTQGEGERPHNAGG EAPGSADASGSEGSKDQAGSQEGGLQAEGTTSQGQAEPPAKDASHAQGEHQAVSDSHGQDGSESGGRSVANEEARAEQSP SDGEARVTPGLDERPQGAFWTGEADGDKSGDSDEASREDVLPEPEQRLSGRVTTVLLPLEKLQDESAFKLRPEGDVSGLA TDIARLGQLFPVDVRPAGEDRYQLVCGFRRVAALRFLKRDAVQARIHLRLSDEDALVMSLAEAIHATPVGPEVLEAKRDE LEAQGRLSAAVRDMLEKALATEDTLAPEGVEEEIDADELAQEVAQRLGAINQDLSLLADVFAALDESRKAELLMQLRYSS ELVTYLEGL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 50811; Mature: 50811
Theoretical pI: Translated: 4.15; Mature: 4.15
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.2 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRARGLFRGATMDAEHRVDGQDGTAGAGPEGGSQAPSGQDGGQGGAVSAELHASGGPSGP CCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCC QGEHRREDASPESGGEHRAEGTPPAEGSEQRAEGTPAAEGSEQRAEGKPSEQGVAQRAED CCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCHHHHCCCCHHHHHHHHHHC TPSEQGEPQNAGSAQGQGGEPPVASGDTQGEGERPHNAGGEAPGSADASGSEGSKDQAGS CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC QEGGLQAEGTTSQGQAEPPAKDASHAQGEHQAVSDSHGQDGSESGGRSVANEEARAEQSP CCCCCCCCCCCCCCCCCCCCCCCHHCCCCHHHHCCCCCCCCCCCCCCCHHHHHHHHCCCC SDGEARVTPGLDERPQGAFWTGEADGDKSGDSDEASREDVLPEPEQRLSGRVTTVLLPLE CCCCEEECCCCCCCCCCCEECCCCCCCCCCCCCCCHHHCCCCCHHHHHCCCEEEEEEEHH KLQDESAFKLRPEGDVSGLATDIARLGQLFPVDVRPAGEDRYQLVCGFRRVAALRFLKRD HHCCCCCEEECCCCCHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH AVQARIHLRLSDEDALVMSLAEAIHATPVGPEVLEAKRDELEAQGRLSAAVRDMLEKALA HHEEEEEEEECCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TEDTLAPEGVEEEIDADELAQEVAQRLGAINQDLSLLADVFAALDESRKAELLMQLRYSS HHHCCCCCCCHHHCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHH ELVTYLEGL HHHHHHHCC >Mature Secondary Structure MRARGLFRGATMDAEHRVDGQDGTAGAGPEGGSQAPSGQDGGQGGAVSAELHASGGPSGP CCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCC QGEHRREDASPESGGEHRAEGTPPAEGSEQRAEGTPAAEGSEQRAEGKPSEQGVAQRAED CCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCHHHHCCCCHHHHHHHHHHC TPSEQGEPQNAGSAQGQGGEPPVASGDTQGEGERPHNAGGEAPGSADASGSEGSKDQAGS CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC QEGGLQAEGTTSQGQAEPPAKDASHAQGEHQAVSDSHGQDGSESGGRSVANEEARAEQSP CCCCCCCCCCCCCCCCCCCCCCCHHCCCCHHHHCCCCCCCCCCCCCCCHHHHHHHHCCCC SDGEARVTPGLDERPQGAFWTGEADGDKSGDSDEASREDVLPEPEQRLSGRVTTVLLPLE CCCCEEECCCCCCCCCCCEECCCCCCCCCCCCCCCHHHCCCCCHHHHHCCCEEEEEEEHH KLQDESAFKLRPEGDVSGLATDIARLGQLFPVDVRPAGEDRYQLVCGFRRVAALRFLKRD HHCCCCCEEECCCCCHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH AVQARIHLRLSDEDALVMSLAEAIHATPVGPEVLEAKRDELEAQGRLSAAVRDMLEKALA HHEEEEEEEECCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TEDTLAPEGVEEEIDADELAQEVAQRLGAINQDLSLLADVFAALDESRKAELLMQLRYSS HHHCCCCCCCHHHCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHH ELVTYLEGL HHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA