| Definition | Myxococcus xanthus DK 1622 chromosome, complete genome. |
|---|---|
| Accession | NC_008095 |
| Length | 9,139,763 |
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The map label for this gene is dck [H]
Identifier: 108760699
GI number: 108760699
Start: 3014265
End: 3014906
Strand: Reverse
Name: dck [H]
Synonym: MXAN_2591
Alternate gene names: 108760699
Gene position: 3014906-3014265 (Counterclockwise)
Preceding gene: 108759970
Following gene: 108762715
Centisome position: 32.99
GC content: 64.49
Gene sequence:
>642_bases ATGCGTGTCAAGGTGCCCAAGGCGCGGCGCTTCGTGGCGCTGGCGGGCAACATCGGCGCGGGCAAGACGACGGCGGCGAA GATGATCAGCCAGGCCTTCGGCTACGAGCTGTTCGACGAGCCCGTTATCGACAACCGCTTCCTGCGTGACTACTACGCGG ACATGACGCGGTGGTCCTTCACGCTCCAGCTCGAGTTCCTCATCCGGCGCGTCGAACACCACGAGCTCATCCATTCGTAC CGCCGCAGCTGCGTGCAGGACCGCACCCTGTACGAGGACCCGGAAATCTTCGCCAAGTACCTCCATGGCCTGGGGCACCT GACGAACGCGGAGCTGGACCTGTACTACGAGTACTTCCAGCGGCTGTCGCGCCACATCATCCGGCCCGACAAGGTCATCT GCTTCGAGGTCGGCAGCGTGGAGGTGCTCCTCCAGCGCATCCGCACCCGGGGACGCGAGGAGGAGAAGGGCATCCGCCAC CAGTTCCTTCGGGGCCTCAACGGCTACTACGCCAGCTTCCCCCTGGTGATACAGGAGAAGTACGGCGTGGACTGCCTCAC CATGGACGTGTCGAAGCAGGACATCCGGCGAGGCCGGGGACGTGAGGAGTTCCTCGACCGCGTCTCCACCTTCCTGTCCT GA
Upstream 100 bases:
>100_bases ATTCATGCCTCGCACCACCGCTCGCACGCGCTCGAAGCCCGCCCAGGCCGCCCCCGCCCAGGAAAAGGCCCCCGCGGCCC CCCCGCGTTCCCGCAACACG
Downstream 100 bases:
>100_bases GCGCCGCGCCCGCGCCTGTCACCTGCGCGGACATTGTCTGGCCCATCGCGTTAGATTCTGGGATATCCACCGGATGAACC GGCGCGGCCCGGCCGCAGGC
Product: deoxynucleoside kinase family protein
Products: NA
Alternate protein names: dAK/dCK [H]
Number of amino acids: Translated: 213; Mature: 213
Protein sequence:
>213_residues MRVKVPKARRFVALAGNIGAGKTTAAKMISQAFGYELFDEPVIDNRFLRDYYADMTRWSFTLQLEFLIRRVEHHELIHSY RRSCVQDRTLYEDPEIFAKYLHGLGHLTNAELDLYYEYFQRLSRHIIRPDKVICFEVGSVEVLLQRIRTRGREEEKGIRH QFLRGLNGYYASFPLVIQEKYGVDCLTMDVSKQDIRRGRGREEFLDRVSTFLS
Sequences:
>Translated_213_residues MRVKVPKARRFVALAGNIGAGKTTAAKMISQAFGYELFDEPVIDNRFLRDYYADMTRWSFTLQLEFLIRRVEHHELIHSY RRSCVQDRTLYEDPEIFAKYLHGLGHLTNAELDLYYEYFQRLSRHIIRPDKVICFEVGSVEVLLQRIRTRGREEEKGIRH QFLRGLNGYYASFPLVIQEKYGVDCLTMDVSKQDIRRGRGREEFLDRVSTFLS >Mature_213_residues MRVKVPKARRFVALAGNIGAGKTTAAKMISQAFGYELFDEPVIDNRFLRDYYADMTRWSFTLQLEFLIRRVEHHELIHSY RRSCVQDRTLYEDPEIFAKYLHGLGHLTNAELDLYYEYFQRLSRHIIRPDKVICFEVGSVEVLLQRIRTRGREEEKGIRH QFLRGLNGYYASFPLVIQEKYGVDCLTMDVSKQDIRRGRGREEFLDRVSTFLS
Specific function: Plays an essential role in generating the deoxyribonucleotide precursors dATP AND dCTP for DNA metabolism. The phosphate acceptor specificity is strict toward deoxyadenosine (dAdo) and deoxycytidine (dCyd). The specificity toward the sugar moiety of the n
COG id: COG1428
COG function: function code F; Deoxynucleoside kinases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the DCK/DGK family [H]
Homologues:
Organism=Homo sapiens, GI18426967, Length=242, Percent_Identity=23.9669421487603, Blast_Score=65, Evalue=4e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002624 [H]
Pfam domain/function: PF01712 dNK [H]
EC number: =2.7.1.74; =2.7.1.76 [H]
Molecular weight: Translated: 25181; Mature: 25181
Theoretical pI: Translated: 9.23; Mature: 9.23
Prosite motif: PS00142 ZINC_PROTEASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRVKVPKARRFVALAGNIGAGKTTAAKMISQAFGYELFDEPVIDNRFLRDYYADMTRWSF CCCCCCCHHHEEEEECCCCCCHHHHHHHHHHHHCCHHHCCCCCCHHHHHHHHHHHHHHHH TLQLEFLIRRVEHHELIHSYRRSCVQDRTLYEDPEIFAKYLHGLGHLTNAELDLYYEYFQ HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHH RLSRHIIRPDKVICFEVGSVEVLLQRIRTRGREEEKGIRHQFLRGLNGYYASFPLVIQEK HHHHHHCCCCCEEEEECCCHHHHHHHHHHCCCCHHHHHHHHHHHHCCCHHHHCCEEEECC YGVDCLTMDVSKQDIRRGRGREEFLDRVSTFLS CCCEEEEECCCHHHHHCCCCHHHHHHHHHHHCC >Mature Secondary Structure MRVKVPKARRFVALAGNIGAGKTTAAKMISQAFGYELFDEPVIDNRFLRDYYADMTRWSF CCCCCCCHHHEEEEECCCCCCHHHHHHHHHHHHCCHHHCCCCCCHHHHHHHHHHHHHHHH TLQLEFLIRRVEHHELIHSYRRSCVQDRTLYEDPEIFAKYLHGLGHLTNAELDLYYEYFQ HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHH RLSRHIIRPDKVICFEVGSVEVLLQRIRTRGREEEKGIRHQFLRGLNGYYASFPLVIQEK HHHHHHCCCCCEEEEECCCHHHHHHHHHHCCCCHHHHHHHHHHHHCCCHHHHCCEEEECC YGVDCLTMDVSKQDIRRGRGREEFLDRVSTFLS CCCEEEEECCCHHHHHCCCCHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7584024; 9384377 [H]