Definition Myxococcus xanthus DK 1622 chromosome, complete genome.
Accession NC_008095
Length 9,139,763

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The map label for this gene is malZ [C]

Identifier: 108758596

GI number: 108758596

Start: 6690129

End: 6692498

Strand: Reverse

Name: malZ [C]

Synonym: MXAN_5374

Alternate gene names: 108758596

Gene position: 6692498-6690129 (Counterclockwise)

Preceding gene: 108759103

Following gene: 108760710

Centisome position: 73.22

GC content: 71.1

Gene sequence:

>2370_bases
ATGGTTCTGACAAGGCGATGGAGCGTGGTGGTCTCCCTCACAGCGGCGCTGGCCGCGGTGACGCTCGCGGCGTGTCTGCC
TCGCGCGGCGCCTCCGCCCCTGGCGCCCAGCGGCACGGTGGTCGCCGTGGCCTACGTGCGGGATGATGCGAGGCGGGCCG
GCGTGGTGGCGGACGTCCCGGAAGGACTGAAGCAGCGCATCGCGGAGACCCTGGCCAGGCGCAACCTGCGCGTGGAGGTG
GTGCCCTACGCGGACTACGCCGCCTACTTCGCGAAGGTGCGCGACTCGCAGCGCCGCTTCGAGATGCTGAAGGCGCTGAC
GCCGGAGGCGCCGCTGCACCTGCTGGTGGAGACGCGGGTGTCGTTCTTCAGCCAGGTAGGGGGCCGCTTCTCGTGGGACA
TCTCGGTGCGGACCACGGGCGCGCGGGCGGACTCCGCCATGGCGCCCACCGTCGTCACCCAGGACTACGGCGCGGCGCTT
CAGTTCGACCAGCAGCGCGAGGACGATGCACAGTTGGAGGTGGCCACGCAGATCGCCGGGCAGGCGGGCGCGCTGTTCGA
CTCCTTCCTTGCCTCGCCCTTCCTGGTGCCGGACACGGACGGTGGTCCGGGCACGGTGCCGGGTCTCGACGCGCCGGCCG
GACCGGGCATCGAGCCGGGCACGGGCACGCCGGCCGTGCCCGAGCCCTACCGGGGTTCGTGGGAGCCGCCGGCGGGAGAC
GCGGTCTACTTCGTGATGGTGGACCGCTTCTCCAATGGAGACCCGAAGAACGACGGTGCAGTGGACCTGGAGGACGCGCA
GGCCTTTCACGGCGGAGACCTGCAAGGCGTCATTGACCGACTGGACGGGCTGCAGCAGCTCGGTGTCCGCACGGTGTGGC
TTTCACCCGTCTTCCAGATGCGCACCGACAAGTTCCATGGGTACGGCGCCTTCCACGGTTACTGGGTGGAGGACTTCGGC
CGGGTGGAGCCGCGCTTCGGAGACGAGGCCCTGCTGAAGACGCTGGCGGCGGAGTTGCGCCGCCGGGACATGCGGCTGGT
GCTGGACGTGGTGCTCAACCACGTGGGGCCAGGGACGCGCCTGTCGCGTGAGCGGCCTGACTGGTTCCACGGCCTGGGTC
CCATCAAGGACTGGGGCGATTCACGCGAGCTGGTGATGGGAGATGTGCACGGCCTGCCGGACCTCGCCGTGGAGAAGGAA
GATGTGTACGCGCACCTGCTGGCGCATTCGCGCCGGTGGGTGGACGTGCTCCAGCCCGCGGGCTTCCGGCTGGACGCGGT
GAAGCACATGCCCACCTCCTTCTGGGCTCGCTACAACGACGACTTGCGCCAGCACGCGGGGCCGGACTTCCTGCTGTTGG
GGGAGATGCTGGACGGCGACCCGGTGCTGCTGTCGAACACGATGAAGGAAGGCCGCTTCGGGACGATGTTCGACTTCCCG
CTGGCCTTCGCGCTGGTGGACGTCTTTTGCAGGGACCGCTCCCCGTCGCACCTGGGCGCCATCCTCTTCAACGACCGGCT
ATACCCGGCGCCGGGCTCGCTCGTGACGATGGTGGACAACCACGACCTGCCCCGGGTGATGAGCGAGTGCGGTGGTGACG
TGGAGCGGGTGAAGCGGGCGCTGGCGGTGCAGCTCACCGCGCGCGGCGTGCCGGCGCTCACCTACGGCACCGAGGAGGGC
CTGACGGGCGCGAAGGAGCCGGAGAACCGGGGGGATATGCGCTTCACGAACCACCCGCTGCGGTCGTGGATTGGCGGGTT
GCTGGCGTTGCGTCGAGGCAGTGCGGCCCTCCAGCGTGGCGAGACGATGATTCTCGCCGCCCGGGAGGACCTCTTTGCCT
ACGCCCGCGTCACCGCCGACGAGGTTGTCGTCATCGCCGTGAATACCCGTGACAGCGCCGTGGACGTGCCGCTGCCCGAC
GGGCTGGCCGGCGCGAAGCTGGAGCCGCTGGCCCTGGCGCCGCCGCTGGCCGCCGGGGGCGCGGGCTTCATGCGCGTGCC
CGCCGGCGAGGTGGCCCTGGCGCGGCTGACGCCTCCGGCGGCGGGCGGCTTCGCCACGGCGGCGAAGCTCGCGGGTCTGC
GGTGGCGGGGGCTGGGCACGCGGCGCCAGGTGGAGCTGGCCGTGGGGGACCCGTCGGTGCGGTTGGTGGGCAGCGGGCCG
GAGATGGGCGGGTGGAAGCCCGAGCGCTCGCTTCGTCCAGGGCCCGAGGGCTTCGCGCTGTCGCTGCCAGTGGGCGCCGT
CTTCGAGTACAAGCTCTTGCGCGGCGGCTCCCAGGGCTCTTTTGACTGGGAGGACGGCGCCAATCGTCTGCTGTTCGTGG
ACGAAGGCACCGGGCCGCTGCGCCAGACGCTGGCGTGGAGCCAGCGCTGA

Upstream 100 bases:

>100_bases
CGGCGTTCGGCAACTCCTTCGTGGACAGCCTGGACCAGTACAACGTTTACGTCGGCCCCGAGCGTCACTGGCACTCGGTG
GTCGCGATCGAGGCCGAAGG

Downstream 100 bases:

>100_bases
CCGCACCTGTTTCATTCGCCCCGCCTGGCGCGGGGCCCACTCCGAGGTTCGAAGTGAACGACCGACTCCTCCGCGCGGCG
CGCCGCCAGCCCACAGACAC

Product: glycosy hydrolase family protein

Products: NA

Alternate protein names: Beta-amylase; Alpha-amylase [H]

Number of amino acids: Translated: 789; Mature: 789

Protein sequence:

>789_residues
MVLTRRWSVVVSLTAALAAVTLAACLPRAAPPPLAPSGTVVAVAYVRDDARRAGVVADVPEGLKQRIAETLARRNLRVEV
VPYADYAAYFAKVRDSQRRFEMLKALTPEAPLHLLVETRVSFFSQVGGRFSWDISVRTTGARADSAMAPTVVTQDYGAAL
QFDQQREDDAQLEVATQIAGQAGALFDSFLASPFLVPDTDGGPGTVPGLDAPAGPGIEPGTGTPAVPEPYRGSWEPPAGD
AVYFVMVDRFSNGDPKNDGAVDLEDAQAFHGGDLQGVIDRLDGLQQLGVRTVWLSPVFQMRTDKFHGYGAFHGYWVEDFG
RVEPRFGDEALLKTLAAELRRRDMRLVLDVVLNHVGPGTRLSRERPDWFHGLGPIKDWGDSRELVMGDVHGLPDLAVEKE
DVYAHLLAHSRRWVDVLQPAGFRLDAVKHMPTSFWARYNDDLRQHAGPDFLLLGEMLDGDPVLLSNTMKEGRFGTMFDFP
LAFALVDVFCRDRSPSHLGAILFNDRLYPAPGSLVTMVDNHDLPRVMSECGGDVERVKRALAVQLTARGVPALTYGTEEG
LTGAKEPENRGDMRFTNHPLRSWIGGLLALRRGSAALQRGETMILAAREDLFAYARVTADEVVVIAVNTRDSAVDVPLPD
GLAGAKLEPLALAPPLAAGGAGFMRVPAGEVALARLTPPAAGGFATAAKLAGLRWRGLGTRRQVELAVGDPSVRLVGSGP
EMGGWKPERSLRPGPEGFALSLPVGAVFEYKLLRGGSQGSFDWEDGANRLLFVDEGTGPLRQTLAWSQR

Sequences:

>Translated_789_residues
MVLTRRWSVVVSLTAALAAVTLAACLPRAAPPPLAPSGTVVAVAYVRDDARRAGVVADVPEGLKQRIAETLARRNLRVEV
VPYADYAAYFAKVRDSQRRFEMLKALTPEAPLHLLVETRVSFFSQVGGRFSWDISVRTTGARADSAMAPTVVTQDYGAAL
QFDQQREDDAQLEVATQIAGQAGALFDSFLASPFLVPDTDGGPGTVPGLDAPAGPGIEPGTGTPAVPEPYRGSWEPPAGD
AVYFVMVDRFSNGDPKNDGAVDLEDAQAFHGGDLQGVIDRLDGLQQLGVRTVWLSPVFQMRTDKFHGYGAFHGYWVEDFG
RVEPRFGDEALLKTLAAELRRRDMRLVLDVVLNHVGPGTRLSRERPDWFHGLGPIKDWGDSRELVMGDVHGLPDLAVEKE
DVYAHLLAHSRRWVDVLQPAGFRLDAVKHMPTSFWARYNDDLRQHAGPDFLLLGEMLDGDPVLLSNTMKEGRFGTMFDFP
LAFALVDVFCRDRSPSHLGAILFNDRLYPAPGSLVTMVDNHDLPRVMSECGGDVERVKRALAVQLTARGVPALTYGTEEG
LTGAKEPENRGDMRFTNHPLRSWIGGLLALRRGSAALQRGETMILAAREDLFAYARVTADEVVVIAVNTRDSAVDVPLPD
GLAGAKLEPLALAPPLAAGGAGFMRVPAGEVALARLTPPAAGGFATAAKLAGLRWRGLGTRRQVELAVGDPSVRLVGSGP
EMGGWKPERSLRPGPEGFALSLPVGAVFEYKLLRGGSQGSFDWEDGANRLLFVDEGTGPLRQTLAWSQR
>Mature_789_residues
MVLTRRWSVVVSLTAALAAVTLAACLPRAAPPPLAPSGTVVAVAYVRDDARRAGVVADVPEGLKQRIAETLARRNLRVEV
VPYADYAAYFAKVRDSQRRFEMLKALTPEAPLHLLVETRVSFFSQVGGRFSWDISVRTTGARADSAMAPTVVTQDYGAAL
QFDQQREDDAQLEVATQIAGQAGALFDSFLASPFLVPDTDGGPGTVPGLDAPAGPGIEPGTGTPAVPEPYRGSWEPPAGD
AVYFVMVDRFSNGDPKNDGAVDLEDAQAFHGGDLQGVIDRLDGLQQLGVRTVWLSPVFQMRTDKFHGYGAFHGYWVEDFG
RVEPRFGDEALLKTLAAELRRRDMRLVLDVVLNHVGPGTRLSRERPDWFHGLGPIKDWGDSRELVMGDVHGLPDLAVEKE
DVYAHLLAHSRRWVDVLQPAGFRLDAVKHMPTSFWARYNDDLRQHAGPDFLLLGEMLDGDPVLLSNTMKEGRFGTMFDFP
LAFALVDVFCRDRSPSHLGAILFNDRLYPAPGSLVTMVDNHDLPRVMSECGGDVERVKRALAVQLTARGVPALTYGTEEG
LTGAKEPENRGDMRFTNHPLRSWIGGLLALRRGSAALQRGETMILAAREDLFAYARVTADEVVVIAVNTRDSAVDVPLPD
GLAGAKLEPLALAPPLAAGGAGFMRVPAGEVALARLTPPAAGGFATAAKLAGLRWRGLGTRRQVELAVGDPSVRLVGSGP
EMGGWKPERSLRPGPEGFALSLPVGAVFEYKLLRGGSQGSFDWEDGANRLLFVDEGTGPLRQTLAWSQR

Specific function: The precursor protein is proteolytically cleaved to produce multiform beta-amylases and a 48 kDa alpha-amylase after secretion [H]

COG id: COG0366

COG function: function code G; Glycosidases

Gene ontology:

Cell location: Secreted [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: In the C-terminal section; belongs to the glycosyl hydrolase 13 family [H]

Homologues:

Organism=Escherichia coli, GI1786604, Length=412, Percent_Identity=26.9417475728155, Blast_Score=110, Evalue=5e-25,
Organism=Escherichia coli, GI1789995, Length=135, Percent_Identity=39.2592592592593, Blast_Score=104, Evalue=2e-23,
Organism=Drosophila melanogaster, GI221330053, Length=189, Percent_Identity=29.6296296296296, Blast_Score=73, Evalue=8e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006048
- InterPro:   IPR005085
- InterPro:   IPR008985
- InterPro:   IPR013780
- InterPro:   IPR006047
- InterPro:   IPR006589
- InterPro:   IPR001554
- InterPro:   IPR018238
- InterPro:   IPR000125
- InterPro:   IPR017853
- InterPro:   IPR013781 [H]

Pfam domain/function: PF00128 Alpha-amylase; PF03423 CBM_25; PF01373 Glyco_hydro_14 [H]

EC number: =3.2.1.2; =3.2.1.1 [H]

Molecular weight: Translated: 85408; Mature: 85408

Theoretical pI: Translated: 5.58; Mature: 5.58

Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS51166 CBM20 ; PS50008 PIPLC_Y_DOMAIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVLTRRWSVVVSLTAALAAVTLAACLPRAAPPPLAPSGTVVAVAYVRDDARRAGVVADVP
CEEEEHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEEECCHHHCCCEECCH
EGLKQRIAETLARRNLRVEVVPYADYAAYFAKVRDSQRRFEMLKALTPEAPLHLLVETRV
HHHHHHHHHHHHHCCCEEEEEECHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHH
SFFSQVGGRFSWDISVRTTGARADSAMAPTVVTQDYGAALQFDQQREDDAQLEVATQIAG
HHHHHHCCCEEEEEEEEECCCCCCCCCCCEEEECCCCCCEEECCCCCCCHHHHHHHHHHC
QAGALFDSFLASPFLVPDTDGGPGTVPGLDAPAGPGIEPGTGTPAVPEPYRGSWEPPAGD
CHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
AVYFVMVDRFSNGDPKNDGAVDLEDAQAFHGGDLQGVIDRLDGLQQLGVRTVWLSPVFQM
EEEEEEEEECCCCCCCCCCCEEHHHCCCCCCCCHHHHHHHHHHHHHHCCEEEECCHHHHH
RTDKFHGYGAFHGYWVEDFGRVEPRFGDEALLKTLAAELRRRDMRLVLDVVLNHVGPGTR
HCCCCCCCCCCCCEEHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
LSRERPDWFHGLGPIKDWGDSRELVMGDVHGLPDLAVEKEDVYAHLLAHSRRWVDVLQPA
CCCCCCCHHHCCCCHHCCCCCCCEEEECCCCCCCCCCCHHHHHHHHHHHCHHHHHHHCCC
GFRLDAVKHMPTSFWARYNDDLRQHAGPDFLLLGEMLDGDPVLLSNTMKEGRFGTMFDFP
CCEEHHHHHCCHHHHHHHCHHHHHHCCCCEEEECCCCCCCCEEEECCCCCCCCCCCHHHH
LAFALVDVFCRDRSPSHLGAILFNDRLYPAPGSLVTMVDNHDLPRVMSECGGDVERVKRA
HHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCCEEEEECCCCHHHHHHHHCCCHHHHHHH
LAVQLTARGVPALTYGTEEGLTGAKEPENRGDMRFTNHPLRSWIGGLLALRRGSAALQRG
HHHEECCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCHHHHHCC
ETMILAAREDLFAYARVTADEVVVIAVNTRDSAVDVPLPDGLAGAKLEPLALAPPLAAGG
CEEEEEEHHHHHHHHEECCCCEEEEEEECCCCEEECCCCCCCCCCCCCCCEECCCCCCCC
AGFMRVPAGEVALARLTPPAAGGFATAAKLAGLRWRGLGTRRQVELAVGDPSVRLVGSGP
CCEEECCCCCEEEEEECCCCCCCHHHHHHHCCCEEECCCCCEEEEEEECCCCEEEEECCC
EMGGWKPERSLRPGPEGFALSLPVGAVFEYKLLRGGSQGSFDWEDGANRLLFVDEGTGPL
CCCCCCCCCCCCCCCCCEEEECCCCHHHHHHHHCCCCCCCCCCCCCCCEEEEEECCCCHH
RQTLAWSQR
HHHHHCCCC
>Mature Secondary Structure
MVLTRRWSVVVSLTAALAAVTLAACLPRAAPPPLAPSGTVVAVAYVRDDARRAGVVADVP
CEEEEHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEEECCHHHCCCEECCH
EGLKQRIAETLARRNLRVEVVPYADYAAYFAKVRDSQRRFEMLKALTPEAPLHLLVETRV
HHHHHHHHHHHHHCCCEEEEEECHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHH
SFFSQVGGRFSWDISVRTTGARADSAMAPTVVTQDYGAALQFDQQREDDAQLEVATQIAG
HHHHHHCCCEEEEEEEEECCCCCCCCCCCEEEECCCCCCEEECCCCCCCHHHHHHHHHHC
QAGALFDSFLASPFLVPDTDGGPGTVPGLDAPAGPGIEPGTGTPAVPEPYRGSWEPPAGD
CHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
AVYFVMVDRFSNGDPKNDGAVDLEDAQAFHGGDLQGVIDRLDGLQQLGVRTVWLSPVFQM
EEEEEEEEECCCCCCCCCCCEEHHHCCCCCCCCHHHHHHHHHHHHHHCCEEEECCHHHHH
RTDKFHGYGAFHGYWVEDFGRVEPRFGDEALLKTLAAELRRRDMRLVLDVVLNHVGPGTR
HCCCCCCCCCCCCEEHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
LSRERPDWFHGLGPIKDWGDSRELVMGDVHGLPDLAVEKEDVYAHLLAHSRRWVDVLQPA
CCCCCCCHHHCCCCHHCCCCCCCEEEECCCCCCCCCCCHHHHHHHHHHHCHHHHHHHCCC
GFRLDAVKHMPTSFWARYNDDLRQHAGPDFLLLGEMLDGDPVLLSNTMKEGRFGTMFDFP
CCEEHHHHHCCHHHHHHHCHHHHHHCCCCEEEECCCCCCCCEEEECCCCCCCCCCCHHHH
LAFALVDVFCRDRSPSHLGAILFNDRLYPAPGSLVTMVDNHDLPRVMSECGGDVERVKRA
HHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCCEEEEECCCCHHHHHHHHCCCHHHHHHH
LAVQLTARGVPALTYGTEEGLTGAKEPENRGDMRFTNHPLRSWIGGLLALRRGSAALQRG
HHHEECCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCHHHHHCC
ETMILAAREDLFAYARVTADEVVVIAVNTRDSAVDVPLPDGLAGAKLEPLALAPPLAAGG
CEEEEEEHHHHHHHHEECCCCEEEEEEECCCCEEECCCCCCCCCCCCCCCEECCCCCCCC
AGFMRVPAGEVALARLTPPAAGGFATAAKLAGLRWRGLGTRRQVELAVGDPSVRLVGSGP
CCEEECCCCCEEEEEECCCCCCCHHHHHHHCCCEEECCCCCEEEEEEECCCCEEEEECCC
EMGGWKPERSLRPGPEGFALSLPVGAVFEYKLLRGGSQGSFDWEDGANRLLFVDEGTGPL
CCCCCCCCCCCCCCCCCEEEECCCCHHHHHHHHCCCCCCCCCCCCCCCEEEEEECCCCHH
RQTLAWSQR
HHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 2435707; 2464578; 2438660; 1827035 [H]