| Definition | Myxococcus xanthus DK 1622 chromosome, complete genome. |
|---|---|
| Accession | NC_008095 |
| Length | 9,139,763 |
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The map label for this gene is surA [H]
Identifier: 108758581
GI number: 108758581
Start: 531505
End: 532482
Strand: Reverse
Name: surA [H]
Synonym: MXAN_0468
Alternate gene names: 108758581
Gene position: 532482-531505 (Counterclockwise)
Preceding gene: 108760198
Following gene: 108762691
Centisome position: 5.83
GC content: 68.61
Gene sequence:
>978_bases ATGGCGGGAATGAAGAAGCTGGTGGCGGCAATCGCGGCGGTGGCGCTCCTGGGGAGCGGCGGCGCGGCGCACGCGGAGCT GGTGGACAAAGTGGCCGCGGTGGTGAATCGCGACATCATCGCGCTGTCCGAGGTGCAGCAGCGCGCGGCGCCAGAGATGG CCCGCGTCAACGACCCGGACCCGCGCAAGCGCGGCGAGCAGCGGCTGCAGCTGATGAAGACGGCCCTGGACACCCTCATC GGCGAGAAGCTGATGGAGTCCGAAATCGCGCAGCTGGGCATCACCGCCAGCGAGGCGGAGGTGGATGAGCTGGTGGCGGA CGTGCGCCAGCAGAACAACATCACCGACCCCGCGCAGTTCGAGCAGCTCCTGCTGGGTGAAGGCCTCACCATGGCCACCT ACCGGGACATGATGCGCAAGCGCATCCTGCGTGACCGCCTGCTGCGCATGAAGGTGGGCCCCCAGGTGAAGATTACCGAG GAGGACCTCAAGGCCGCGTACACGCAGTACACGCGCATGGAGAGCGGTGACTCGGAGGTCCACGCGCGCCACATCCTGGT GCAGGTGGACGCCAAGGCCACGGCGGAGCAGGTGGAAGCCGCCAAGAAGCGGGCGGAGGCCATCGCCACGGAAGCGCGCC GGCCGGGCATGGACTTCGCCTCGCTGGCCCGCGCCCGCAGCGAAGGCCCCAGCGCCGCGGACGGCGGTGACCTGGGCTGG TTCAAGCGGGGCGTCATGGTTCCAGCCTTCGAGAAGGCCGCGTTCGGCCTCCCCGAGGGCGGCGTCAGTGAGCCGGTACG CACCAACTTCGGCTGGCACGTGCTGAAGGTGGAGGAGCGCCGCACGGTGGCCGCCGCGTCCTACGAGGAGATGCGCCCCA AGCTGGAGGGCAAGCTGCTCCAGGAGAAGACGGAGAAGTTCCTCGACCAGTACGTGCAGGAACTGCGGCAGAAGGCCAAC GTCGACGTGAAGCTGTAG
Upstream 100 bases:
>100_bases GCCATCCGCGGGCGTCCGACGCCTCAGCAGGCGACGGCGGAGTGACGACGAAATCGAAGACCGGGGCGGCGGTTGGACGC GCCCGGGGCGGTACGGAAGG
Downstream 100 bases:
>100_bases CCGCCGTGGGCCTTCCGCACGTCGGAATCTCCCTGGGGGACGTGTCGGGCATCGGGCCGGAGGTGACGGCCGCGGCCCTG ACGAAGCCCTCCGTGCGCAA
Product: peptidylprolyl cis-trans isomerase
Products: NA
Alternate protein names: Peptidyl-prolyl cis-trans isomerase surA; PPIase surA; Rotamase surA [H]
Number of amino acids: Translated: 325; Mature: 324
Protein sequence:
>325_residues MAGMKKLVAAIAAVALLGSGGAAHAELVDKVAAVVNRDIIALSEVQQRAAPEMARVNDPDPRKRGEQRLQLMKTALDTLI GEKLMESEIAQLGITASEAEVDELVADVRQQNNITDPAQFEQLLLGEGLTMATYRDMMRKRILRDRLLRMKVGPQVKITE EDLKAAYTQYTRMESGDSEVHARHILVQVDAKATAEQVEAAKKRAEAIATEARRPGMDFASLARARSEGPSAADGGDLGW FKRGVMVPAFEKAAFGLPEGGVSEPVRTNFGWHVLKVEERRTVAAASYEEMRPKLEGKLLQEKTEKFLDQYVQELRQKAN VDVKL
Sequences:
>Translated_325_residues MAGMKKLVAAIAAVALLGSGGAAHAELVDKVAAVVNRDIIALSEVQQRAAPEMARVNDPDPRKRGEQRLQLMKTALDTLI GEKLMESEIAQLGITASEAEVDELVADVRQQNNITDPAQFEQLLLGEGLTMATYRDMMRKRILRDRLLRMKVGPQVKITE EDLKAAYTQYTRMESGDSEVHARHILVQVDAKATAEQVEAAKKRAEAIATEARRPGMDFASLARARSEGPSAADGGDLGW FKRGVMVPAFEKAAFGLPEGGVSEPVRTNFGWHVLKVEERRTVAAASYEEMRPKLEGKLLQEKTEKFLDQYVQELRQKAN VDVKL >Mature_324_residues AGMKKLVAAIAAVALLGSGGAAHAELVDKVAAVVNRDIIALSEVQQRAAPEMARVNDPDPRKRGEQRLQLMKTALDTLIG EKLMESEIAQLGITASEAEVDELVADVRQQNNITDPAQFEQLLLGEGLTMATYRDMMRKRILRDRLLRMKVGPQVKITEE DLKAAYTQYTRMESGDSEVHARHILVQVDAKATAEQVEAAKKRAEAIATEARRPGMDFASLARARSEGPSAADGGDLGWF KRGVMVPAFEKAAFGLPEGGVSEPVRTNFGWHVLKVEERRTVAAASYEEMRPKLEGKLLQEKTEKFLDQYVQELRQKANV DVKL
Specific function: Chaperone involved in the correct folding and assembly of outer membrane proteins. It recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act
COG id: COG0760
COG function: function code O; Parvulin-like peptidyl-prolyl isomerase
Gene ontology:
Cell location: Periplasm. Note=Is capable of associating with the outer membrane (By similarity) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 2 PpiC domains [H]
Homologues:
Organism=Homo sapiens, GI38679892, Length=114, Percent_Identity=36.8421052631579, Blast_Score=66, Evalue=4e-11, Organism=Escherichia coli, GI1786238, Length=278, Percent_Identity=27.3381294964029, Blast_Score=99, Evalue=3e-22, Organism=Escherichia coli, GI1790211, Length=70, Percent_Identity=45.7142857142857, Blast_Score=65, Evalue=5e-12,
Paralogues:
None
Copy number: 400 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 160 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000297 - InterPro: IPR023034 - InterPro: IPR015391 - InterPro: IPR008880 [H]
Pfam domain/function: PF00639 Rotamase; PF09312 SurA_N [H]
EC number: =5.2.1.8 [H]
Molecular weight: Translated: 35834; Mature: 35702
Theoretical pI: Translated: 6.56; Mature: 6.56
Prosite motif: PS01096 PPIC_PPIASE_1 ; PS50198 PPIC_PPIASE_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.0 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAGMKKLVAAIAAVALLGSGGAAHAELVDKVAAVVNRDIIALSEVQQRAAPEMARVNDPD CCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHCCHHHCCCCCC PRKRGEQRLQLMKTALDTLIGEKLMESEIAQLGITASEAEVDELVADVRQQNNITDPAQF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCHHHH EQLLLGEGLTMATYRDMMRKRILRDRLLRMKVGPQVKITEEDLKAAYTQYTRMESGDSEV HHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEECHHHHHHHHHHHHHHCCCCHHH HARHILVQVDAKATAEQVEAAKKRAEAIATEARRPGMDFASLARARSEGPSAADGGDLGW HHHEEEEEECCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCCCCCCHHH FKRGVMVPAFEKAAFGLPEGGVSEPVRTNFGWHVLKVEERRTVAAASYEEMRPKLEGKLL HHHCCCCCCHHHHHCCCCCCCCCCCCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHH QEKTEKFLDQYVQELRQKANVDVKL HHHHHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure AGMKKLVAAIAAVALLGSGGAAHAELVDKVAAVVNRDIIALSEVQQRAAPEMARVNDPD CCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHCCHHHCCCCCC PRKRGEQRLQLMKTALDTLIGEKLMESEIAQLGITASEAEVDELVADVRQQNNITDPAQF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCHHHH EQLLLGEGLTMATYRDMMRKRILRDRLLRMKVGPQVKITEEDLKAAYTQYTRMESGDSEV HHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEECHHHHHHHHHHHHHHCCCCHHH HARHILVQVDAKATAEQVEAAKKRAEAIATEARRPGMDFASLARARSEGPSAADGGDLGW HHHEEEEEECCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCCCCCCHHH FKRGVMVPAFEKAAFGLPEGGVSEPVRTNFGWHVLKVEERRTVAAASYEEMRPKLEGKLL HHHCCCCCCHHHHHCCCCCCCCCCCCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHH QEKTEKFLDQYVQELRQKANVDVKL HHHHHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 12700255 [H]