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The map label for this gene is ywqD [H]

Identifier: 108758270

GI number: 108758270

Start: 3778847

End: 3779542

Strand: Direct

Name: ywqD [H]

Synonym: MXAN_3228

Alternate gene names: 108758270

Gene position: 3778847-3779542 (Clockwise)

Preceding gene: 108762508

Following gene: 108759368

Centisome position: 41.35

GC content: 70.4

Gene sequence:

>696_bases
GTGGATGACAACCCGACGGGCGGCAACGCGGTGGACCGCCGGGTGGTGACGCTGACGGCGCCGGCATCGGCCGCGGCGGA
GCAATACCGGAGTCTTTACTACAGGCTCGAGCGGATGCGGGACCTGCGGCCGATGAAGGTCGTCGCGCTCACCTCGGCGA
TGCCCGGGGAAGGCAAGACGGTGACGAGCGTCAACCTGGCGCTCGCCGCGGCCCGGGCGAACCCGGAGCGCCGCATCCTG
CTGGTGGATGCGGACCTGCGCCGGGGCGGCGTGGCGGCCATGCTGGGCATGCGCAACAAGATGGGCCTGGCGGAGCTGCT
GGCGGGGGACTGTGAGGTGCGGGACGTGGTGCGGCGGTTCAACTCCACGCGCCTGGCCCTCATCCCCGCGGGCGTCACGC
CCGAGGACACCGCGCAGGTGCTGGCGAGCGGTCGGATGAAGCAGTTCCTCAAGGCGGTGCGTGAGGGCTTCGACGAGGTC
TACGTCGACCTGCCGCCCGCGCTGCCCTTCGCGGACGCGGCCATCCTGGGCCATCAAGCGGACGGCATGCTGATGGTCAT
CCGCGCCAACGTGACGTCGGGCAAGGCGGTGCACCTGGCGGTGGAGAGCCTGGGCGGCGCGCCCATCATCGGGTGCGTGC
TGAATGGCGCGGAGGTCCACTCGGCGCCGTATCTGAAGAACTACGAGAAGAAGTAG

Upstream 100 bases:

>100_bases
GCGTGTCTAACCCCACGTCGTTGAACTGAGTCTTGCCGGAATAGGACGGAGGACGGACATGGATCAGACGATGGAGCGGG
CGGGCAACTTCCTCCCCCGA

Downstream 100 bases:

>100_bases
CGGTGGGTGGCTTTGGTTCCGGTTCCCGCCTCCTGGTGACAGGGGGCGGGGTCGGAGATGGAAGAGGGTCGGGCGGGCAG
GTTGGAGGGGCACGTGCTCC

Product: putative protein-tyrosine kinase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 231; Mature: 231

Protein sequence:

>231_residues
MDDNPTGGNAVDRRVVTLTAPASAAAEQYRSLYYRLERMRDLRPMKVVALTSAMPGEGKTVTSVNLALAAARANPERRIL
LVDADLRRGGVAAMLGMRNKMGLAELLAGDCEVRDVVRRFNSTRLALIPAGVTPEDTAQVLASGRMKQFLKAVREGFDEV
YVDLPPALPFADAAILGHQADGMLMVIRANVTSGKAVHLAVESLGGAPIIGCVLNGAEVHSAPYLKNYEKK

Sequences:

>Translated_231_residues
MDDNPTGGNAVDRRVVTLTAPASAAAEQYRSLYYRLERMRDLRPMKVVALTSAMPGEGKTVTSVNLALAAARANPERRIL
LVDADLRRGGVAAMLGMRNKMGLAELLAGDCEVRDVVRRFNSTRLALIPAGVTPEDTAQVLASGRMKQFLKAVREGFDEV
YVDLPPALPFADAAILGHQADGMLMVIRANVTSGKAVHLAVESLGGAPIIGCVLNGAEVHSAPYLKNYEKK
>Mature_231_residues
MDDNPTGGNAVDRRVVTLTAPASAAAEQYRSLYYRLERMRDLRPMKVVALTSAMPGEGKTVTSVNLALAAARANPERRIL
LVDADLRRGGVAAMLGMRNKMGLAELLAGDCEVRDVVRRFNSTRLALIPAGVTPEDTAQVLASGRMKQFLKAVREGFDEV
YVDLPPALPFADAAILGHQADGMLMVIRANVTSGKAVHLAVESLGGAPIIGCVLNGAEVHSAPYLKNYEKK

Specific function: May be involved in the regulation of capsular polysaccharide biosynthesis. Autophosphorylates in vitro. Phosphorylates and activates in vitro two UDP-glucose dehydrogenases, YwqF and TuaD, as well as the DNA-binding proteins Ssb and SsbB [H]

COG id: COG0489

COG function: function code D; ATPases involved in chromosome partitioning

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CpsD/CapB family [H]

Homologues:

Organism=Escherichia coli, GI1787216, Length=198, Percent_Identity=34.3434343434343, Blast_Score=111, Evalue=5e-26,
Organism=Escherichia coli, GI87082032, Length=206, Percent_Identity=31.0679611650485, Blast_Score=102, Evalue=2e-23,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002586
- InterPro:   IPR005702 [H]

Pfam domain/function: PF01656 CbiA [H]

EC number: =2.7.10.2 [H]

Molecular weight: Translated: 24740; Mature: 24740

Theoretical pI: Translated: 9.40; Mature: 9.40

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
4.3 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDDNPTGGNAVDRRVVTLTAPASAAAEQYRSLYYRLERMRDLRPMKVVALTSAMPGEGKT
CCCCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCE
VTSVNLALAAARANPERRILLVDADLRRGGVAAMLGMRNKMGLAELLAGDCEVRDVVRRF
EEEHHEEEEEECCCCCEEEEEEECCCCCCCHHHHHHCCCCCCHHHHHHCCCHHHHHHHHC
NSTRLALIPAGVTPEDTAQVLASGRMKQFLKAVREGFDEVYVDLPPALPFADAAILGHQA
CCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHCHHHEEEECCCCCCCCHHHHHCCCC
DGMLMVIRANVTSGKAVHLAVESLGGAPIIGCVLNGAEVHSAPYLKNYEKK
CCEEEEEEECCCCCCEEEEEEECCCCCCEEEEEECCCHHCCCCCCCCCCCC
>Mature Secondary Structure
MDDNPTGGNAVDRRVVTLTAPASAAAEQYRSLYYRLERMRDLRPMKVVALTSAMPGEGKT
CCCCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCE
VTSVNLALAAARANPERRILLVDADLRRGGVAAMLGMRNKMGLAELLAGDCEVRDVVRRF
EEEHHEEEEEECCCCCEEEEEEECCCCCCCHHHHHHCCCCCCHHHHHHCCCHHHHHHHHC
NSTRLALIPAGVTPEDTAQVLASGRMKQFLKAVREGFDEVYVDLPPALPFADAAILGHQA
CCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHCHHHEEEECCCCCCCCHHHHHCCCC
DGMLMVIRANVTSGKAVHLAVESLGGAPIIGCVLNGAEVHSAPYLKNYEKK
CCEEEEEEECCCCCCEEEEEEECCCCCCEEEEEECCCHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9353933; 9384377 [H]