| Definition | Myxococcus xanthus DK 1622 chromosome, complete genome. |
|---|---|
| Accession | NC_008095 |
| Length | 9,139,763 |
Click here to switch to the map view.
The map label for this gene is 108762508
Identifier: 108762508
GI number: 108762508
Start: 3777378
End: 3778775
Strand: Direct
Name: 108762508
Synonym: MXAN_3227
Alternate gene names: NA
Gene position: 3777378-3778775 (Clockwise)
Preceding gene: 108762066
Following gene: 108758270
Centisome position: 41.33
GC content: 67.81
Gene sequence:
>1398_bases ATGACGGCAGACCAGCTTCTGGGAGCCCTGTGGCGGCGCAAGGCCCTGGTCGGTGCCATCGCAGCAGTGGTCTTCGTGGT GGGCGCAGCCATCGTGATGACCCGGCCGAGCATGTACGAGGCTTCGGTGGTGGTCCGCGTGGAGCCGCAGCGGCCGGGTG AGGAGATGGTGCAGCGCACGGTGAGCGAAATCATCGAGCAGCGGCTGCTCACCGTTCGCCAGGAGCTGCTGGCGCGTCCG GTGCTTCAGAAGGCCATCGAGGAGATGAACCTCTATCCGGACATCGTTTCGGAGAAGGGCATGGAGTCCGCGGTCGCGCA GATGCGCAAGGACCTCACGGTGCGCGTGGAAGGTGAGACGGCCTTCGAGCTCACCTACGCCAACCGCGACCCGCAGGTGG CGGCGCAGGTGGCCAACCGCCTGCCGACCATCTTCTCCGATGAGACGCTGAAGATTCGTCAGGCGCAGGCGGCGCGCGCC ACCGACCTCTTCAACGAGGAGATGGTTCAGCTGGGCAAGGCGGTCAGCAACTGGGAGGCGAAGCTCTCCCAGTTCAAGGT GGACCACCTGGGCGAGCTGCCCGAGCAGATGGAGATGAACATGCGCGGCCTGGAGCGCGTGTCGCATCAGCTCCAGACGA AGTCGGAGGAGCTGCGTGTCGCCGAGGGCCGCCGCTCCGACCTGGCCCGCGCTCGCAACGCGGTGGACAGCGAGGCTGGC CGGCTCGAGGCCGCGGAGAACGGGCTCACCCGTTCCCTGGTCAACGCTCGCACCACCTGGACGGAGGACCACCCGGAGGT GAAGCGCCTTCAGACGGAGCTGGACGGAATGTCGGCTCGCCGCAAGGAGGCCGAAGGGCGGCTGTGGGCCGAGCGCGCCG AGCGCACCCGCGTGGCCACGCTGATTGGCAACATCCAGCAGGAGATTCAGGACCTCCAGAAGCAGGCCGAGGCGTACCAG GGCCGGCTGAACAACACCCCGCGCTGGGCGCACGAGCTGGCGGTGATGAACCGCGACTACGAAATCGCGCGCACCAAGTA CCAGAGCGTGGTGAGCCGCAAGGTGGAGGCGGAGATCGCGCAGGAGCTGGAGGCCAAGAGCGCCAAGAGCCTGTTCAACG TCATCTCCCCGGCGGGCGTGCCGGCGACCCCGGCCCGGCCGGACCGCATGGCGGGCATGCTCATCGTCTTCCTCCTGGCC CTGGGCCTGGGGGCGCTGACGGGAGCGGTGCTGGAGATGCGTGATGACAGCCTGCGCGATGGCACCGAGGTTCGCCAGCG CCTCACGCTGCCGGTGCTCGCGGTGGTCCCGGAAATGCAGGGCAAGACGGAGCGGCGGATTCTGATGCCGGCTTCGGGGG CTCGAAACAGCGTGTCTAACCCCACGTCGTTGAACTGA
Upstream 100 bases:
>100_bases CGGTGGACCTGACGCGCAATGTGTTCGCCGTCCGTTTGGTGGTGACGCCTTGGTAGCTACAGCGCGTGGGATGGAGGAGG AGCGGAACATGGAGCGAGGG
Downstream 100 bases:
>100_bases GTCTTGCCGGAATAGGACGGAGGACGGACATGGATCAGACGATGGAGCGGGCGGGCAACTTCCTCCCCCGAGTGGATGAC AACCCGACGGGCGGCAACGC
Product: chain length determinant family protein
Products: NA
Alternate protein names: Lipopolysaccharide Biosynthesis; Polysaccharide Chain Length Determinant Protein; Chain Length Determinant Family Protein; Chain Length Determinant Protein; Exopolysaccharide Biosynthesis Protein; Protein Kinase Involved In Polysaccharide Biosynthesis
Number of amino acids: Translated: 465; Mature: 464
Protein sequence:
>465_residues MTADQLLGALWRRKALVGAIAAVVFVVGAAIVMTRPSMYEASVVVRVEPQRPGEEMVQRTVSEIIEQRLLTVRQELLARP VLQKAIEEMNLYPDIVSEKGMESAVAQMRKDLTVRVEGETAFELTYANRDPQVAAQVANRLPTIFSDETLKIRQAQAARA TDLFNEEMVQLGKAVSNWEAKLSQFKVDHLGELPEQMEMNMRGLERVSHQLQTKSEELRVAEGRRSDLARARNAVDSEAG RLEAAENGLTRSLVNARTTWTEDHPEVKRLQTELDGMSARRKEAEGRLWAERAERTRVATLIGNIQQEIQDLQKQAEAYQ GRLNNTPRWAHELAVMNRDYEIARTKYQSVVSRKVEAEIAQELEAKSAKSLFNVISPAGVPATPARPDRMAGMLIVFLLA LGLGALTGAVLEMRDDSLRDGTEVRQRLTLPVLAVVPEMQGKTERRILMPASGARNSVSNPTSLN
Sequences:
>Translated_465_residues MTADQLLGALWRRKALVGAIAAVVFVVGAAIVMTRPSMYEASVVVRVEPQRPGEEMVQRTVSEIIEQRLLTVRQELLARP VLQKAIEEMNLYPDIVSEKGMESAVAQMRKDLTVRVEGETAFELTYANRDPQVAAQVANRLPTIFSDETLKIRQAQAARA TDLFNEEMVQLGKAVSNWEAKLSQFKVDHLGELPEQMEMNMRGLERVSHQLQTKSEELRVAEGRRSDLARARNAVDSEAG RLEAAENGLTRSLVNARTTWTEDHPEVKRLQTELDGMSARRKEAEGRLWAERAERTRVATLIGNIQQEIQDLQKQAEAYQ GRLNNTPRWAHELAVMNRDYEIARTKYQSVVSRKVEAEIAQELEAKSAKSLFNVISPAGVPATPARPDRMAGMLIVFLLA LGLGALTGAVLEMRDDSLRDGTEVRQRLTLPVLAVVPEMQGKTERRILMPASGARNSVSNPTSLN >Mature_464_residues TADQLLGALWRRKALVGAIAAVVFVVGAAIVMTRPSMYEASVVVRVEPQRPGEEMVQRTVSEIIEQRLLTVRQELLARPV LQKAIEEMNLYPDIVSEKGMESAVAQMRKDLTVRVEGETAFELTYANRDPQVAAQVANRLPTIFSDETLKIRQAQAARAT DLFNEEMVQLGKAVSNWEAKLSQFKVDHLGELPEQMEMNMRGLERVSHQLQTKSEELRVAEGRRSDLARARNAVDSEAGR LEAAENGLTRSLVNARTTWTEDHPEVKRLQTELDGMSARRKEAEGRLWAERAERTRVATLIGNIQQEIQDLQKQAEAYQG RLNNTPRWAHELAVMNRDYEIARTKYQSVVSRKVEAEIAQELEAKSAKSLFNVISPAGVPATPARPDRMAGMLIVFLLAL GLGALTGAVLEMRDDSLRDGTEVRQRLTLPVLAVVPEMQGKTERRILMPASGARNSVSNPTSLN
Specific function: Unknown
COG id: COG3206
COG function: function code M; Uncharacterized protein involved in exopolysaccharide biosynthesis
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 51879; Mature: 51748
Theoretical pI: Translated: 7.00; Mature: 7.00
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTADQLLGALWRRKALVGAIAAVVFVVGAAIVMTRPSMYEASVVVRVEPQRPGEEMVQRT CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEECEEEEEECCCCCHHHHHHHH VSEIIEQRLLTVRQELLARPVLQKAIEEMNLYPDIVSEKGMESAVAQMRKDLTVRVEGET HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCHHHHHHHHHHCCEEEECCCE AFELTYANRDPQVAAQVANRLPTIFSDETLKIRQAQAARATDLFNEEMVQLGKAVSNWEA EEEEEECCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KLSQFKVDHLGELPEQMEMNMRGLERVSHQLQTKSEELRVAEGRRSDLARARNAVDSEAG HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCHHHHHHHHHHHHHHHH RLEAAENGLTRSLVNARTTWTEDHPEVKRLQTELDGMSARRKEAEGRLWAERAERTRVAT HHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH LIGNIQQEIQDLQKQAEAYQGRLNNTPRWAHELAVMNRDYEIARTKYQSVVSRKVEAEIA HHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH QELEAKSAKSLFNVISPAGVPATPARPDRMAGMLIVFLLALGLGALTGAVLEMRDDSLRD HHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC GTEVRQRLTLPVLAVVPEMQGKTERRILMPASGARNSVSNPTSLN HHHHHHHHHHHHHHHCCCCCCCCCCEEEECCCCCCCCCCCCCCCC >Mature Secondary Structure TADQLLGALWRRKALVGAIAAVVFVVGAAIVMTRPSMYEASVVVRVEPQRPGEEMVQRT CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEECEEEEEECCCCCHHHHHHHH VSEIIEQRLLTVRQELLARPVLQKAIEEMNLYPDIVSEKGMESAVAQMRKDLTVRVEGET HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCHHHHHHHHHHCCEEEECCCE AFELTYANRDPQVAAQVANRLPTIFSDETLKIRQAQAARATDLFNEEMVQLGKAVSNWEA EEEEEECCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KLSQFKVDHLGELPEQMEMNMRGLERVSHQLQTKSEELRVAEGRRSDLARARNAVDSEAG HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCHHHHHHHHHHHHHHHH RLEAAENGLTRSLVNARTTWTEDHPEVKRLQTELDGMSARRKEAEGRLWAERAERTRVAT HHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH LIGNIQQEIQDLQKQAEAYQGRLNNTPRWAHELAVMNRDYEIARTKYQSVVSRKVEAEIA HHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH QELEAKSAKSLFNVISPAGVPATPARPDRMAGMLIVFLLALGLGALTGAVLEMRDDSLRD HHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC GTEVRQRLTLPVLAVVPEMQGKTERRILMPASGARNSVSNPTSLN HHHHHHHHHHHHHHHCCCCCCCCCCEEEECCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA