| Definition | Myxococcus xanthus DK 1622 chromosome, complete genome. |
|---|---|
| Accession | NC_008095 |
| Length | 9,139,763 |
Click here to switch to the map view.
The map label for this gene is 108757642
Identifier: 108757642
GI number: 108757642
Start: 6173644
End: 6174843
Strand: Reverse
Name: 108757642
Synonym: MXAN_4937
Alternate gene names: NA
Gene position: 6174843-6173644 (Counterclockwise)
Preceding gene: 108762426
Following gene: 108760640
Centisome position: 67.56
GC content: 62.67
Gene sequence:
>1200_bases ATGCTGTCCAATGGCACACGCGTTCTGGATTCGAAATGCGTGCCTTTAAAGCTGAAAATGGAATTCATGCGTTCATTGTT GTGGCGGTTATCCGGCGTGACAGTCCTCACGTCGGACCGCCATCCCCAAGTCGAAGCGGATTGGAGCAAGACAATGAAGG TCAGTCGAGTGGCCCCCATGTGGCGAATGCTGAGTGCGGCCCTGGCGTTCGGCATGATGAGCGCGTGCGGTTCTGAGTTG GAGGACGAATCCGTCGTTTCCGAAGAGGCGCCGGTGGGCGGCGAGTCGTCATCGGACTCGGCGTCGGCGATGGCCGGTGA CCGTTATGCCAACGCAGTCGTCCAAAGCGGTGTCATTGCCGTCCTCAATCCGAACAACGCCGTGGGCGCACCGGATGGGA ACGCCGCGACGTTCCTGGGGCTCCTGGGCGGCTCGATGGTCCTGGACATGGGCCTGGGCGAAGAGGGCACAGGGCCGCTG CGCGTCTACTACCAGGGCCTTTCGCTGGCGGTCATCGCCCAGGTGGAATTCCTTCGTGGGGACATGAGCATCATCAGCAC GGGACAGGCGAACCTGCTGGACCTGGGGCTCGGGACTCACTCCACGCTGGTGCCATTCAGCAGCTCCACGCCGTATCGCT ATGTGAGGCTGCGCGGTGGGGTTGCCTCGTTGTACGGCTTGGACGCGGTGGAGGATACGGGCGGTGGTGCGAGCGCTGTG TGTGGCGATGGCCGTATCAACAATGGGGAGCAGTGTGACGACGGCAACCGGGTTTCGTCGGATGGCTGTAGCAGCACCTG CCGGGTGGAGCCCGGGTACACCTGCAATGGCATGCAGCCCAGTGTCTGCACGGACGTCAATGAATGCACGAATGGCACTG CGCAGTGTTCGGTGAATGCGATTTGCACGAACACGCCGGGAAGTTACACCTGCACCTGCAGACCGGGCTACTGGGGAAAT GGTTGGACGTGCAGTGACATCGACGAGTGCTCGAACGGGACTGCCGCGTGCAATCCCAGCCAGGTGTGTGTCAACACGCC GGGTGGCTATGAGTGCGTGGGTGGCTCCTGTCCGGCTCCCCGGGTGCAGTGTGGCGCGCAGTGCGTGGATGTGTCGTCGG ACGTGAACAACTGCGGCGCCTGCGGCGTTGTCTGTCCGGCGGCGAAGACCTGCTCGTCGGGCGTCTGTGTCATGAGGTAG
Upstream 100 bases:
>100_bases CCGAGAATCGAGAAGGCTGCCTCGTGCTGGGCCAGGAGTCTCAGCCTTCGTGTCCAGGGTGGGTGTTGCCTTACGGTCGA CGCGGTGATGCCAGGAGAAA
Downstream 100 bases:
>100_bases CCGGGACCGACGCTGTCGCTCGCGGAATGACATCATGAGCTGGCAGGCTCACCGCCCTCGCGGCGCAACACGGCGCCGCG AGGGTCGGGGTTCTCCTGGC
Product: EGF domain-containing protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 399; Mature: 399
Protein sequence:
>399_residues MLSNGTRVLDSKCVPLKLKMEFMRSLLWRLSGVTVLTSDRHPQVEADWSKTMKVSRVAPMWRMLSAALAFGMMSACGSEL EDESVVSEEAPVGGESSSDSASAMAGDRYANAVVQSGVIAVLNPNNAVGAPDGNAATFLGLLGGSMVLDMGLGEEGTGPL RVYYQGLSLAVIAQVEFLRGDMSIISTGQANLLDLGLGTHSTLVPFSSSTPYRYVRLRGGVASLYGLDAVEDTGGGASAV CGDGRINNGEQCDDGNRVSSDGCSSTCRVEPGYTCNGMQPSVCTDVNECTNGTAQCSVNAICTNTPGSYTCTCRPGYWGN GWTCSDIDECSNGTAACNPSQVCVNTPGGYECVGGSCPAPRVQCGAQCVDVSSDVNNCGACGVVCPAAKTCSSGVCVMR
Sequences:
>Translated_399_residues MLSNGTRVLDSKCVPLKLKMEFMRSLLWRLSGVTVLTSDRHPQVEADWSKTMKVSRVAPMWRMLSAALAFGMMSACGSEL EDESVVSEEAPVGGESSSDSASAMAGDRYANAVVQSGVIAVLNPNNAVGAPDGNAATFLGLLGGSMVLDMGLGEEGTGPL RVYYQGLSLAVIAQVEFLRGDMSIISTGQANLLDLGLGTHSTLVPFSSSTPYRYVRLRGGVASLYGLDAVEDTGGGASAV CGDGRINNGEQCDDGNRVSSDGCSSTCRVEPGYTCNGMQPSVCTDVNECTNGTAQCSVNAICTNTPGSYTCTCRPGYWGN GWTCSDIDECSNGTAACNPSQVCVNTPGGYECVGGSCPAPRVQCGAQCVDVSSDVNNCGACGVVCPAAKTCSSGVCVMR >Mature_399_residues MLSNGTRVLDSKCVPLKLKMEFMRSLLWRLSGVTVLTSDRHPQVEADWSKTMKVSRVAPMWRMLSAALAFGMMSACGSEL EDESVVSEEAPVGGESSSDSASAMAGDRYANAVVQSGVIAVLNPNNAVGAPDGNAATFLGLLGGSMVLDMGLGEEGTGPL RVYYQGLSLAVIAQVEFLRGDMSIISTGQANLLDLGLGTHSTLVPFSSSTPYRYVRLRGGVASLYGLDAVEDTGGGASAV CGDGRINNGEQCDDGNRVSSDGCSSTCRVEPGYTCNGMQPSVCTDVNECTNGTAQCSVNAICTNTPGSYTCTCRPGYWGN GWTCSDIDECSNGTAACNPSQVCVNTPGGYECVGGSCPAPRVQCGAQCVDVSSDVNNCGACGVVCPAAKTCSSGVCVMR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI66346695, Length=89, Percent_Identity=49.438202247191, Blast_Score=86, Evalue=6e-17, Organism=Homo sapiens, GI23397689, Length=97, Percent_Identity=44.3298969072165, Blast_Score=85, Evalue=1e-16, Organism=Homo sapiens, GI23397681, Length=97, Percent_Identity=44.3298969072165, Blast_Score=85, Evalue=1e-16, Organism=Homo sapiens, GI17978491, Length=97, Percent_Identity=45.360824742268, Blast_Score=84, Evalue=2e-16, Organism=Homo sapiens, GI281485550, Length=89, Percent_Identity=49.438202247191, Blast_Score=83, Evalue=5e-16, Organism=Homo sapiens, GI120587029, Length=103, Percent_Identity=43.6893203883495, Blast_Score=82, Evalue=1e-15, Organism=Homo sapiens, GI223029476, Length=152, Percent_Identity=36.1842105263158, Blast_Score=79, Evalue=7e-15, Organism=Homo sapiens, GI223029470, Length=152, Percent_Identity=36.1842105263158, Blast_Score=79, Evalue=8e-15, Organism=Homo sapiens, GI223029472, Length=152, Percent_Identity=36.1842105263158, Blast_Score=79, Evalue=1e-14, Organism=Homo sapiens, GI5453766, Length=152, Percent_Identity=36.1842105263158, Blast_Score=79, Evalue=1e-14, Organism=Homo sapiens, GI223029474, Length=152, Percent_Identity=36.1842105263158, Blast_Score=79, Evalue=1e-14, Organism=Homo sapiens, GI56237021, Length=89, Percent_Identity=43.8202247191011, Blast_Score=75, Evalue=8e-14, Organism=Homo sapiens, GI118572606, Length=131, Percent_Identity=38.1679389312977, Blast_Score=74, Evalue=2e-13, Organism=Homo sapiens, GI283046663, Length=104, Percent_Identity=42.3076923076923, Blast_Score=74, Evalue=2e-13, Organism=Homo sapiens, GI40807489, Length=160, Percent_Identity=31.875, Blast_Score=74, Evalue=3e-13, Organism=Homo sapiens, GI283046665, Length=104, Percent_Identity=42.3076923076923, Blast_Score=73, Evalue=6e-13, Organism=Homo sapiens, GI166362728, Length=98, Percent_Identity=39.7959183673469, Blast_Score=72, Evalue=6e-13, Organism=Homo sapiens, GI296011015, Length=98, Percent_Identity=39.7959183673469, Blast_Score=72, Evalue=7e-13, Organism=Homo sapiens, GI31377568, Length=70, Percent_Identity=50, Blast_Score=72, Evalue=8e-13, Organism=Homo sapiens, GI23397683, Length=127, Percent_Identity=36.2204724409449, Blast_Score=69, Evalue=6e-12, Organism=Homo sapiens, GI51873053, Length=147, Percent_Identity=34.6938775510204, Blast_Score=69, Evalue=6e-12, Organism=Homo sapiens, GI259013547, Length=147, Percent_Identity=34.6938775510204, Blast_Score=69, Evalue=6e-12, Organism=Homo sapiens, GI23397691, Length=127, Percent_Identity=36.2204724409449, Blast_Score=69, Evalue=6e-12, Organism=Homo sapiens, GI51873055, Length=147, Percent_Identity=34.6938775510204, Blast_Score=69, Evalue=7e-12, Organism=Homo sapiens, GI68508955, Length=99, Percent_Identity=39.3939393939394, Blast_Score=69, Evalue=8e-12, Organism=Homo sapiens, GI86788132, Length=72, Percent_Identity=45.8333333333333, Blast_Score=69, Evalue=9e-12, Organism=Homo sapiens, GI86788015, Length=72, Percent_Identity=45.8333333333333, Blast_Score=69, Evalue=9e-12, Organism=Homo sapiens, GI9665262, Length=72, Percent_Identity=45.8333333333333, Blast_Score=69, Evalue=9e-12, Organism=Homo sapiens, GI189491645, Length=134, Percent_Identity=35.0746268656716, Blast_Score=69, Evalue=1e-11, Organism=Homo sapiens, GI144953895, Length=199, Percent_Identity=29.6482412060301, Blast_Score=68, Evalue=1e-11, Organism=Homo sapiens, GI189491647, Length=98, Percent_Identity=41.8367346938776, Blast_Score=67, Evalue=3e-11, Organism=Homo sapiens, GI239749684, Length=91, Percent_Identity=41.7582417582418, Blast_Score=67, Evalue=3e-11, Organism=Homo sapiens, GI169177000, Length=91, Percent_Identity=41.7582417582418, Blast_Score=67, Evalue=3e-11, Organism=Homo sapiens, GI59850812, Length=112, Percent_Identity=37.5, Blast_Score=67, Evalue=3e-11, Organism=Homo sapiens, GI56550049, Length=112, Percent_Identity=37.5, Blast_Score=67, Evalue=3e-11, Organism=Homo sapiens, GI169178458, Length=91, Percent_Identity=41.7582417582418, Blast_Score=67, Evalue=3e-11, Organism=Homo sapiens, GI110347412, Length=186, Percent_Identity=33.8709677419355, Blast_Score=67, Evalue=3e-11, Organism=Homo sapiens, GI110347431, Length=186, Percent_Identity=33.8709677419355, Blast_Score=66, Evalue=5e-11, Organism=Homo sapiens, GI110347437, Length=186, Percent_Identity=33.8709677419355, Blast_Score=66, Evalue=5e-11, Organism=Homo sapiens, GI19743803, Length=71, Percent_Identity=46.4788732394366, Blast_Score=66, Evalue=6e-11, Organism=Homo sapiens, GI34734066, Length=123, Percent_Identity=37.3983739837398, Blast_Score=66, Evalue=7e-11, Organism=Homo sapiens, GI34734062, Length=123, Percent_Identity=37.3983739837398, Blast_Score=65, Evalue=8e-11, Organism=Homo sapiens, GI222352166, Length=105, Percent_Identity=31.4285714285714, Blast_Score=65, Evalue=9e-11, Organism=Homo sapiens, GI17978489, Length=104, Percent_Identity=38.4615384615385, Blast_Score=65, Evalue=1e-10, Organism=Caenorhabditis elegans, GI71989803, Length=90, Percent_Identity=42.2222222222222, Blast_Score=72, Evalue=8e-13, Organism=Caenorhabditis elegans, GI212646669, Length=127, Percent_Identity=34.6456692913386, Blast_Score=71, Evalue=9e-13, Organism=Caenorhabditis elegans, GI71989816, Length=90, Percent_Identity=42.2222222222222, Blast_Score=71, Evalue=1e-12, Organism=Caenorhabditis elegans, GI71989812, Length=90, Percent_Identity=42.2222222222222, Blast_Score=71, Evalue=1e-12, Organism=Caenorhabditis elegans, GI17557081, Length=125, Percent_Identity=35.2, Blast_Score=70, Evalue=2e-12, Organism=Caenorhabditis elegans, GI17551862, Length=115, Percent_Identity=40, Blast_Score=64, Evalue=1e-10, Organism=Drosophila melanogaster, GI221329796, Length=133, Percent_Identity=37.593984962406, Blast_Score=79, Evalue=4e-15, Organism=Drosophila melanogaster, GI221472639, Length=173, Percent_Identity=36.9942196531792, Blast_Score=70, Evalue=4e-12, Organism=Drosophila melanogaster, GI221331100, Length=115, Percent_Identity=40.8695652173913, Blast_Score=66, Evalue=5e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 41207; Mature: 41207
Theoretical pI: Translated: 4.34; Mature: 4.34
Prosite motif: PS00010 ASX_HYDROXYL ; PS01186 EGF_2 ; PS50026 EGF_3 ; PS01187 EGF_CA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
6.5 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 10.0 %Cys+Met (Translated Protein) 6.5 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 10.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLSNGTRVLDSKCVPLKLKMEFMRSLLWRLSGVTVLTSDRHPQVEADWSKTMKVSRVAPM CCCCCCEEECCCCCEEEEHHHHHHHHHHHHCCCEEEECCCCCCCCCCHHHHHHHHHHHHH WRMLSAALAFGMMSACGSELEDESVVSEEAPVGGESSSDSASAMAGDRYANAVVQSGVIA HHHHHHHHHHHHHHHHCCCCCHHHHHHCCCCCCCCCCCCCHHHHHCHHHHHHHHHCCEEE VLNPNNAVGAPDGNAATFLGLLGGSMVLDMGLGEEGTGPLRVYYQGLSLAVIAQVEFLRG EECCCCCCCCCCCCHHHHHHHHCCCEEEEECCCCCCCCCEEEEECCCCEEEEEHHHHHHC DMSIISTGQANLLDLGLGTHSTLVPFSSSTPYRYVRLRGGVASLYGLDAVEDTGGGASAV CEEEEECCCCCEEEECCCCCCEEEECCCCCCEEEEEEECCCHHHHCCCCCCCCCCCCEEE CGDGRINNGEQCDDGNRVSSDGCSSTCRVEPGYTCNGMQPSVCTDVNECTNGTAQCSVNA ECCCCCCCCCCCCCCCEECCCCCCCEEEECCCCEECCCCCHHHCCHHHHCCCCEEEEEEE ICTNTPGSYTCTCRPGYWGNGWTCSDIDECSNGTAACNPSQVCVNTPGGYECVGGSCPAP EEECCCCCEEEEECCCCCCCCEECCCHHHHCCCCCCCCCCCEEEECCCCCEECCCCCCCC RVQCGAQCVDVSSDVNNCGACGVVCPAAKTCSSGVCVMR HHHHCCEEEECCCCCCCCCCCCEECCCCHHCCCCCEEEC >Mature Secondary Structure MLSNGTRVLDSKCVPLKLKMEFMRSLLWRLSGVTVLTSDRHPQVEADWSKTMKVSRVAPM CCCCCCEEECCCCCEEEEHHHHHHHHHHHHCCCEEEECCCCCCCCCCHHHHHHHHHHHHH WRMLSAALAFGMMSACGSELEDESVVSEEAPVGGESSSDSASAMAGDRYANAVVQSGVIA HHHHHHHHHHHHHHHHCCCCCHHHHHHCCCCCCCCCCCCCHHHHHCHHHHHHHHHCCEEE VLNPNNAVGAPDGNAATFLGLLGGSMVLDMGLGEEGTGPLRVYYQGLSLAVIAQVEFLRG EECCCCCCCCCCCCHHHHHHHHCCCEEEEECCCCCCCCCEEEEECCCCEEEEEHHHHHHC DMSIISTGQANLLDLGLGTHSTLVPFSSSTPYRYVRLRGGVASLYGLDAVEDTGGGASAV CEEEEECCCCCEEEECCCCCCEEEECCCCCCEEEEEEECCCHHHHCCCCCCCCCCCCEEE CGDGRINNGEQCDDGNRVSSDGCSSTCRVEPGYTCNGMQPSVCTDVNECTNGTAQCSVNA ECCCCCCCCCCCCCCCEECCCCCCCEEEECCCCEECCCCCHHHCCHHHHCCCCEEEEEEE ICTNTPGSYTCTCRPGYWGNGWTCSDIDECSNGTAACNPSQVCVNTPGGYECVGGSCPAP EEECCCCCEEEEECCCCCCCCEECCCHHHHCCCCCCCCCCCEEEECCCCCEECCCCCCCC RVQCGAQCVDVSSDVNNCGACGVVCPAAKTCSSGVCVMR HHHHCCEEEECCCCCCCCCCCCEECCCCHHCCCCCEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA