Click here to switch to the map view.

The map label for this gene is 108563871

Identifier: 108563871

GI number: 108563871

Start: 1504070

End: 1504816

Strand: Direct

Name: 108563871

Synonym: HPAG1_1446

Alternate gene names: NA

Gene position: 1504070-1504816 (Clockwise)

Preceding gene: 108563870

Following gene: 108563872

Centisome position: 94.22

GC content: 42.57

Gene sequence:

>747_bases
ATGTTGAAAAGAATGATATTATTAGGGGCTTTGGGTGTTTTAGCGAGCGCTGAAGAGAGTGCGGCTTTTGTGGGAGTCAA
TTACCAGGTGAGCATGATACAAAATCAGACTAAAATGGTGAATGCCAACGGCTTGCAAAAGCCTTTGATGAAGTTCCCGC
CTTACGCAGGAGCGGGTTTTGAAGTGGGCTATAAGCAATTTTTCGGTAAGAAAAAATGGTTTGGTGCGCGTTATTATGGG
TTTTTTGACTATACGCACGATCGCTTTGGTGTGATGAAAAAGGGTATTGCGGTAGGCGAGAGCGGGTTTATTTACAATAG
TTTTAGTTTTGGAGGGACGACTTTAACGGAAAGGGATTCCTATCAGGGGCAATACTATGTCAATTTATTCACTTATGGTG
TAGGGTTGGATACGCTGTGGAATTTTGTGAATAAAGAAAACATGGTTTTTGGTTTTGTGGTGGGGATTCAATTGGCTGGG
GATAGTTGGGCAACGAGCATCAGTAAAGAGATCGCTAATTATGCAAAACACCACAGCAATTCTAGTTATAGCCCGGCCAA
TTTCCAGTTTTTATGGAAGTTTGGGGTCCGCACCCATATCGCTAAACACAATAGCCTAGAATTAGGGATTAAAGTGCCTA
CGATCACGCACCAGCTTTTCTCTCTTACCAACGAAAAGGGATACACCTTACAGGCTGATGTGCGCCGAGTTTATGCGTTT
CAAATCAGTTACTTGAGGGATTTTTAA

Upstream 100 bases:

>100_bases
TTAAGAAAAAATATATTATTATTTCTTTATAAGTAATACTTAGCCATTTTAAGCTAATGTAATGTGAAGTGATTATCAAA
AAATAAAGGGAAAAGACTGA

Downstream 100 bases:

>100_bases
CCCCTTTTTAGATACAATCGCACCTGAAACTATCCATGTTAAAGGTGTGAAAATGGCAAATTTGGAAAATTTAGACTGGA
AAAATTTAGGCTTTAGCTAC

Product: outer membrane protein HorJ

Products: NA

Alternate protein names: Outer Membrane Protein HorA; Outer Membrane Protein HopQ; Outer Membrane Protein HopE; Outer Membrane Protein HopZ; Outer Membrane Protein/Porin; Outer Membrane Protein HorC; Outer Membrane Protein HopW Protein (; Outer Membrane Protein SabB/HopO; Outer Membrane Protein HorJ; Outer Membrane Protein,HopV SabB SabA; Outer Membrane Protein HopA; Outer Membrane Protein BabA; Outer Membrane Protein HopD; Outer Membrane Protein ,Adhesin BabA BabB; Outer Membrane Function; Outer Membrane Protein HorK; Outer Membrane Protein HopB; Adhesin; Outer Membrane Protein HorF; Outer Membrane Protein HorL; Outer Membrane Protein HopL; Outer Membrane Protein HopC; Outer Membrane Protein,HopV BabB BabA; Outer Membrane Protein HorB; Outer Membrane Protein HopF; Outer Membrane Protein HopG

Number of amino acids: Translated: 248; Mature: 248

Protein sequence:

>248_residues
MLKRMILLGALGVLASAEESAAFVGVNYQVSMIQNQTKMVNANGLQKPLMKFPPYAGAGFEVGYKQFFGKKKWFGARYYG
FFDYTHDRFGVMKKGIAVGESGFIYNSFSFGGTTLTERDSYQGQYYVNLFTYGVGLDTLWNFVNKENMVFGFVVGIQLAG
DSWATSISKEIANYAKHHSNSSYSPANFQFLWKFGVRTHIAKHNSLELGIKVPTITHQLFSLTNEKGYTLQADVRRVYAF
QISYLRDF

Sequences:

>Translated_248_residues
MLKRMILLGALGVLASAEESAAFVGVNYQVSMIQNQTKMVNANGLQKPLMKFPPYAGAGFEVGYKQFFGKKKWFGARYYG
FFDYTHDRFGVMKKGIAVGESGFIYNSFSFGGTTLTERDSYQGQYYVNLFTYGVGLDTLWNFVNKENMVFGFVVGIQLAG
DSWATSISKEIANYAKHHSNSSYSPANFQFLWKFGVRTHIAKHNSLELGIKVPTITHQLFSLTNEKGYTLQADVRRVYAF
QISYLRDF
>Mature_248_residues
MLKRMILLGALGVLASAEESAAFVGVNYQVSMIQNQTKMVNANGLQKPLMKFPPYAGAGFEVGYKQFFGKKKWFGARYYG
FFDYTHDRFGVMKKGIAVGESGFIYNSFSFGGTTLTERDSYQGQYYVNLFTYGVGLDTLWNFVNKENMVFGFVVGIQLAG
DSWATSISKEIANYAKHHSNSSYSPANFQFLWKFGVRTHIAKHNSLELGIKVPTITHQLFSLTNEKGYTLQADVRRVYAF
QISYLRDF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 28049; Mature: 28049

Theoretical pI: Translated: 9.90; Mature: 9.90

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLKRMILLGALGVLASAEESAAFVGVNYQVSMIQNQTKMVNANGLQKPLMKFPPYAGAGF
CCHHHHHHHHHHHHHCCCCCEEEEECCEEEEEECCCCEEECCCCCHHHHHHCCCCCCCCC
EVGYKQFFGKKKWFGARYYGFFDYTHDRFGVMKKGIAVGESGFIYNSFSFGGTTLTERDS
CCCHHHHCCCCCCCCEEEEEEEECCCHHHHHHHHCCEECCCCCEEEECCCCCCEECCCCC
YQGQYYVNLFTYGVGLDTLWNFVNKENMVFGFVVGIQLAGDSWATSISKEIANYAKHHSN
CCCEEEEEEEEECCCHHHHHHHHCCCCEEEEEEEEEEECCCHHHHHHHHHHHHHHHHCCC
SSYSPANFQFLWKFGVRTHIAKHNSLELGIKVPTITHQLFSLTNEKGYTLQADVRRVYAF
CCCCCCCEEEEEEECCHHHHCCCCCEEEEEECCHHHHHHHHHCCCCCCEEHHHHHHHHHH
QISYLRDF
HHHHHHCC
>Mature Secondary Structure
MLKRMILLGALGVLASAEESAAFVGVNYQVSMIQNQTKMVNANGLQKPLMKFPPYAGAGF
CCHHHHHHHHHHHHHCCCCCEEEEECCEEEEEECCCCEEECCCCCHHHHHHCCCCCCCCC
EVGYKQFFGKKKWFGARYYGFFDYTHDRFGVMKKGIAVGESGFIYNSFSFGGTTLTERDS
CCCHHHHCCCCCCCCEEEEEEEECCCHHHHHHHHCCEECCCCCEEEECCCCCCEECCCCC
YQGQYYVNLFTYGVGLDTLWNFVNKENMVFGFVVGIQLAGDSWATSISKEIANYAKHHSN
CCCEEEEEEEEECCCHHHHHHHHCCCCEEEEEEEEEEECCCHHHHHHHHHHHHHHHHCCC
SSYSPANFQFLWKFGVRTHIAKHNSLELGIKVPTITHQLFSLTNEKGYTLQADVRRVYAF
CCCCCCCEEEEEEECCHHHHCCCCCEEEEEECCHHHHHHHHHCCCCCCEEHHHHHHHHHH
QISYLRDF
HHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA