| Definition | Helicobacter pylori HPAG1 chromosome, complete genome. |
|---|---|
| Accession | NC_008086 |
| Length | 1,596,366 |
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The map label for this gene is coaD [H]
Identifier: 108563863
GI number: 108563863
Start: 1496297
End: 1496770
Strand: Direct
Name: coaD [H]
Synonym: HPAG1_1438
Alternate gene names: 108563863
Gene position: 1496297-1496770 (Clockwise)
Preceding gene: 108563862
Following gene: 108563864
Centisome position: 93.73
GC content: 41.56
Gene sequence:
>474_bases ATGCAAAAAATCGGCATTTATCCGGGCACTTTTGATCCGGTCACTAACGGGCATATAGACATCATCCATCGATCCAGCGA ATTGTTTGAAAAGCTCATTGTCGCTGTGGCGCATTCAAGTGCTAAAAACCCCATGTTTAGTTTGAAAGAGCGCTTAAAAA TGATGCAACTGGCCACTAAAAGTTTTAAAAATGTAGAATGCGTGGCGTTTGAAGGGCTGTTAGCCAATCTGGCTAAAGAA TACCATTGTAAGGTGCTAGTTAGGGGCTTAAGGGTGGTGAGCGATTTTGAATACGAATTGCAAATGGGCTATGCGAACAA ATCCTTAAACCACGAATTAGAAACCTTGTATTTCATGCCCACTTTGCAAAACGCTTTCATCAGCTCTTCTATCGTGCGAT CCATTATCGCGCATAAGGGTGATGCGAGCCATTTAGTGCCTAAAGAAATTTATCCTTTGATTTCAAAGGCTTAA
Upstream 100 bases:
>100_bases AGAGCAAGACTTTAGAGGCGATGCAAGATTTTTTAGTGGGGAAGTGGTTTGACAGCTTAGGGATAGAAAATGACTTATAC CCACGATGGGGAATGAACTG
Downstream 100 bases:
>100_bases AATGTATGTGGTGTTAGAAGGCGTTGATGGCGTGGGCAAAAGCACTCAAGTAGGATTGTTAAAAGACCGGTTTAAAAACG CCCTTTTTACCAAAGAGCCA
Product: phosphopantetheine adenylyltransferase
Products: NA
Alternate protein names: Dephospho-CoA pyrophosphorylase; Pantetheine-phosphate adenylyltransferase; PPAT [H]
Number of amino acids: Translated: 157; Mature: 157
Protein sequence:
>157_residues MQKIGIYPGTFDPVTNGHIDIIHRSSELFEKLIVAVAHSSAKNPMFSLKERLKMMQLATKSFKNVECVAFEGLLANLAKE YHCKVLVRGLRVVSDFEYELQMGYANKSLNHELETLYFMPTLQNAFISSSIVRSIIAHKGDASHLVPKEIYPLISKA
Sequences:
>Translated_157_residues MQKIGIYPGTFDPVTNGHIDIIHRSSELFEKLIVAVAHSSAKNPMFSLKERLKMMQLATKSFKNVECVAFEGLLANLAKE YHCKVLVRGLRVVSDFEYELQMGYANKSLNHELETLYFMPTLQNAFISSSIVRSIIAHKGDASHLVPKEIYPLISKA >Mature_157_residues MQKIGIYPGTFDPVTNGHIDIIHRSSELFEKLIVAVAHSSAKNPMFSLKERLKMMQLATKSFKNVECVAFEGLLANLAKE YHCKVLVRGLRVVSDFEYELQMGYANKSLNHELETLYFMPTLQNAFISSSIVRSIIAHKGDASHLVPKEIYPLISKA
Specific function: Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate [H]
COG id: COG0669
COG function: function code H; Phosphopantetheine adenylyltransferase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the bacterial CoaD family [H]
Homologues:
Organism=Escherichia coli, GI1790065, Length=151, Percent_Identity=49.6688741721854, Blast_Score=178, Evalue=1e-46,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004821 - InterPro: IPR004820 - InterPro: IPR001980 - InterPro: IPR014729 [H]
Pfam domain/function: PF01467 CTP_transf_2 [H]
EC number: =2.7.7.3 [H]
Molecular weight: Translated: 17699; Mature: 17699
Theoretical pI: Translated: 9.05; Mature: 9.05
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 5.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQKIGIYPGTFDPVTNGHIDIIHRSSELFEKLIVAVAHSSAKNPMFSLKERLKMMQLATK CCCCCCCCCCCCCCCCCCEEEEECCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH SFKNVECVAFEGLLANLAKEYHCKVLVRGLRVVSDFEYELQMGYANKSLNHELETLYFMP HCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHEEECCCCCCCCCHHHHHEECH TLQNAFISSSIVRSIIAHKGDASHLVPKEIYPLISKA HHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCC >Mature Secondary Structure MQKIGIYPGTFDPVTNGHIDIIHRSSELFEKLIVAVAHSSAKNPMFSLKERLKMMQLATK CCCCCCCCCCCCCCCCCCEEEEECCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH SFKNVECVAFEGLLANLAKEYHCKVLVRGLRVVSDFEYELQMGYANKSLNHELETLYFMP HCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHEEECCCCCCCCCHHHHHEECH TLQNAFISSSIVRSIIAHKGDASHLVPKEIYPLISKA HHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA