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The map label for this gene is yidD [C]

Identifier: 108563800

GI number: 108563800

Start: 1424330

End: 1424686

Strand: Direct

Name: yidD [C]

Synonym: HPAG1_1375

Alternate gene names: 108563800

Gene position: 1424330-1424686 (Clockwise)

Preceding gene: 108563799

Following gene: 108563801

Centisome position: 89.22

GC content: 42.58

Gene sequence:

>357_bases
ATGCGAAACAATAAAACGCCTTTTTTGAGCGCGATTTTTACGGCATCAATTAGGGGTTACCAACGCTTTTTTTCGGCTTT
CACCCCTTCAAGCTGCCGGTTTTACCCCACTTGCTCTAACTACGCTCTGTGGTTGCTCTGTTTTGAAAACCCTTTGAGCG
CTATGGGTAAGATCGCTATAAGGATACTCTCATGCAACCCTTTTTGCTCTGGGGGCATTGCTTACCCTACTACTCGCTTG
AAACGCCCTAGTTTGCTCCAATCTCATAAAGATTTTAATCGCAATTTTAAAACCATTACTTTTTGGCTCGTTCCTACTAC
AAAAAGCCGCACAACTTACTACATCATTAAGGTTTGA

Upstream 100 bases:

>100_bases
TTTGGGCTTTAGAAAAACATTTTTTAGAAATGCTAACTTCCATTAAAAACTATATTGAACAAAGCCTTAAAAGACTTGAA
AAAAGGAATAACTCATACCT

Downstream 100 bases:

>100_bases
TCACAATGGATAAAAACAACAATAATAATCTCCGCTTGATTTTAGCGATCGCTCTGTCTTTCTTATTTATCGCTATTTAC
AGCTATTTTTTCCAAAAACC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 118; Mature: 118

Protein sequence:

>118_residues
MRNNKTPFLSAIFTASIRGYQRFFSAFTPSSCRFYPTCSNYALWLLCFENPLSAMGKIAIRILSCNPFCSGGIAYPTTRL
KRPSLLQSHKDFNRNFKTITFWLVPTTKSRTTYYIIKV

Sequences:

>Translated_118_residues
MRNNKTPFLSAIFTASIRGYQRFFSAFTPSSCRFYPTCSNYALWLLCFENPLSAMGKIAIRILSCNPFCSGGIAYPTTRL
KRPSLLQSHKDFNRNFKTITFWLVPTTKSRTTYYIIKV
>Mature_118_residues
MRNNKTPFLSAIFTASIRGYQRFFSAFTPSSCRFYPTCSNYALWLLCFENPLSAMGKIAIRILSCNPFCSGGIAYPTTRL
KRPSLLQSHKDFNRNFKTITFWLVPTTKSRTTYYIIKV

Specific function: Unknown

COG id: COG0759

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0161 family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y1375_HELPH (Q1CRI0)

Other databases:

- EMBL:   CP000241
- RefSeq:   YP_628116.1
- STRING:   Q1CRI0
- GeneID:   4098046
- GenomeReviews:   CP000241_GR
- KEGG:   hpa:HPAG1_1375
- eggNOG:   COG0759
- HOGENOM:   HBG634291
- OMA:   FFSAFTP
- ProtClustDB:   PRK14374
- BioCyc:   HPYL357544:HPAG1_1375-MONOMER
- HAMAP:   MF_00386
- InterPro:   IPR002696
- ProDom:   PD004225
- TIGRFAMs:   TIGR00278

Pfam domain/function: PF01809 DUF37

EC number: NA

Molecular weight: Translated: 13615; Mature: 13615

Theoretical pI: Translated: 10.70; Mature: 10.70

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.2 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
5.9 %Cys+Met (Translated Protein)
4.2 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
5.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRNNKTPFLSAIFTASIRGYQRFFSAFTPSSCRFYPTCSNYALWLLCFENPLSAMGKIAI
CCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCEEEEEEECCCHHHHCEEEE
RILSCNPFCSGGIAYPTTRLKRPSLLQSHKDFNRNFKTITFWLVPTTKSRTTYYIIKV
EEEECCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCEEEEEEEEECCCCCEEEEEEEC
>Mature Secondary Structure
MRNNKTPFLSAIFTASIRGYQRFFSAFTPSSCRFYPTCSNYALWLLCFENPLSAMGKIAI
CCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCEEEEEEECCCHHHHCEEEE
RILSCNPFCSGGIAYPTTRLKRPSLLQSHKDFNRNFKTITFWLVPTTKSRTTYYIIKV
EEEECCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCEEEEEEEEECCCCCEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA