Definition Helicobacter pylori HPAG1 chromosome, complete genome.
Accession NC_008086
Length 1,596,366

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The map label for this gene is 108563783

Identifier: 108563783

GI number: 108563783

Start: 1409851

End: 1409943

Strand: Direct

Name: 108563783

Synonym: HPAG1_1358

Alternate gene names: NA

Gene position: 1409851-1409943 (Clockwise)

Preceding gene: 108563782

Following gene: 108563787

Centisome position: 88.32

GC content: 36.56

Gene sequence:

>93_bases
ATGAAACACAAAAATGGCAAACGCTCTTGGAAAACATTATACTTTGAGTTTGCTTTTTTGGGGCTTAAAGTGATCGTTTC
TGTGAAACGCTGA

Upstream 100 bases:

>100_bases
TTGGTGCGATCTAGGGGTGTTTTAAGGGGGTTTGTTGTAGGATTCCATCACGCCCCATAGTTGCGATATGGGGCAAATCC
TATGTCAAAAGGAGCATGCC

Downstream 100 bases:

>100_bases
TTTTCTAAGAGCGTTCCCCTAAGTTTAAAAGCTTAGGGGTTTCCTTTAAAAAGCGGGTTTGTCCTTGACTTTTGGGGCGT
TGGTCATTTTGTTATAAAAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 30; Mature: 30

Protein sequence:

>30_residues
MKHKNGKRSWKTLYFEFAFLGLKVIVSVKR

Sequences:

>Translated_30_residues
MKHKNGKRSWKTLYFEFAFLGLKVIVSVKR
>Mature_30_residues
MKHKNGKRSWKTLYFEFAFLGLKVIVSVKR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 3612; Mature: 3612

Theoretical pI: Translated: 11.44; Mature: 11.44

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKHKNGKRSWKTLYFEFAFLGLKVIVSVKR
CCCCCCCCHHHHHHHHHHHHHHHHEEEECC
>Mature Secondary Structure
MKHKNGKRSWKTLYFEFAFLGLKVIVSVKR
CCCCCCCCHHHHHHHHHHHHHHHHEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA