| Definition | Helicobacter pylori HPAG1 chromosome, complete genome. |
|---|---|
| Accession | NC_008086 |
| Length | 1,596,366 |
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The map label for this gene is 108563782
Identifier: 108563782
GI number: 108563782
Start: 1409310
End: 1409522
Strand: Direct
Name: 108563782
Synonym: HPAG1_1357
Alternate gene names: NA
Gene position: 1409310-1409522 (Clockwise)
Preceding gene: 108563775
Following gene: 108563783
Centisome position: 88.28
GC content: 47.42
Gene sequence:
>213_bases ATGGCACACCATGAACAACAACACCAAGCGCAACAACAGCAACAACAACAGGCTAACAGCCAACACCACCACCATCACCA CGCGCACCACCACCATTATTATGGCGGCGAACACCATCACCATAACGCGCAACAACACGCTGAACAACAAGCAGAGCAAC AAGCTCAACAACAGCAACAACAAAAAGCACAACAACAAAACCAACAATATTGA
Upstream 100 bases:
>100_bases GTATTAAAATCTTTTTCGTTAATAATTGGTTAGATTTTGCATTATAAAATGAAATCCTAGCTAATGAGCTAGAATTTAAA TTTCAATTAAAGGAGTCATC
Downstream 100 bases:
>100_bases TTGGGGCGTTTGTGGGGGTGGCCTTAGGGCTACTCCTGGCTTTTAGCTCTTTTGATCCAGTAAATCTATCAATTCAAACC AGCCCTTTTAATTCCATTAG
Product: histidine and glutamine-rich metal binding protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 70; Mature: 69
Protein sequence:
>70_residues MAHHEQQHQAQQQQQQQANSQHHHHHHAHHHHYYGGEHHHHNAQQHAEQQAEQQAQQQQQQKAQQQNQQY
Sequences:
>Translated_70_residues MAHHEQQHQAQQQQQQQANSQHHHHHHAHHHHYYGGEHHHHNAQQHAEQQAEQQAQQQQQQKAQQQNQQY >Mature_69_residues AHHEQQHQAQQQQQQQANSQHHHHHHAHHHHYYGGEHHHHNAQQHAEQQAEQQAQQQQQQKAQQQNQQY
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 8523; Mature: 8392
Theoretical pI: Translated: 7.19; Mature: 7.19
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAHHEQQHQAQQQQQQQANSQHHHHHHAHHHHYYGGEHHHHNAQQHAEQQAEQQAQQQQQ CCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH QKAQQQNQQY HHHHHHCCCC >Mature Secondary Structure AHHEQQHQAQQQQQQQANSQHHHHHHAHHHHYYGGEHHHHNAQQHAEQQAEQQAQQQQQ CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH QKAQQQNQQY HHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA