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The map label for this gene is bioB [H]

Identifier: 108563755

GI number: 108563755

Start: 1380386

End: 1381234

Strand: Direct

Name: bioB [H]

Synonym: HPAG1_1330

Alternate gene names: 108563755

Gene position: 1380386-1381234 (Clockwise)

Preceding gene: 108563751

Following gene: 108563756

Centisome position: 86.47

GC content: 43.11

Gene sequence:

>849_bases
ATGCAAGAGATTTTTTTATGTTCTATTTCCAATGTGCGCAGTGGGGATTGTAAGGAAGATTGTGCTTATTGCACGCAAAG
CTCACACCACCAAGGAGCGATTAAGCGCTATAAATTTAAAGATGAAAAAGTGGTTTTACAAGAGGCTAGAGCGTTAAGGG
AATTGGGGGCTTTAGGGTTTTGTCTGGTTACTTCAGGGCGCGAATTAGACGATGAAAAATGCGAATACATCGCCAAATTA
GCTAAAGCCATCAATCAAGAAGAATTAGGCTTGCATTTAATCGCATGCTGCGGGCGTGCGGATTTGGAGCAATTAGAGTT
TTTAAGAGATGCGGGTATTCATAGCTATAACCACAATTTAGAAACTTCGCAAAATTTCTTCCCTAAAATTTGTTCCACGC
ACACATGGGAAGAAAGGTTTATCACATGCGAAAACGCTTTAAGGGCGGGGTTAGGCTTGTGCAGTGGGGGGATTTTTGGG
CTTAATGAGAGCTGGGAAGACAGGATTGAAATGCTTAGAGCCTTAGCTTCGCTCTCCCCGCACACCACGCCGATTAATTT
TTTCATTAAAAACCCGGTATTGCCCATTGATGCAGAGACTTTAAGCGCAGATGAAGCCCTAGAATGCGTGCTTTTGGCTA
AGGAATTTTTGCCTAACGCTAGGCTTATGGTGGCTGGGGGGCGTGAAGTGGTGTTTAAAGATAACGATAAAAAGGAAGCC
AAGCTTTTTGAATACGGCATCAATGCGGTGGTGTTGGGGGATTATTTAACCACCAAAGGCAAAGCCCCTAAAAAAGATAT
AGAAAAACTGCTCTCTTATGGCTTGACAATGGCGACAAGCTGTCATTAA

Upstream 100 bases:

>100_bases
TAATATTTAATGGAATAAAGCCTTTAAAATCAAAAGCGCTTCTTTTTCTTTGCTATAATCAATCTCAAAAAACCAACTTT
TTTAAAATAAAGGAATGATT

Downstream 100 bases:

>100_bases
TGAGAGAATTTTTTAAAAGCGTTAGAGGGTTTTTGCGCCTTCTTAGAATGATTTTCCCCGAGCGTCTGAAAAACGCCTTT
TTGGGCTTGAGCGAATTGTT

Product: biotin synthase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 282; Mature: 282

Protein sequence:

>282_residues
MQEIFLCSISNVRSGDCKEDCAYCTQSSHHQGAIKRYKFKDEKVVLQEARALRELGALGFCLVTSGRELDDEKCEYIAKL
AKAINQEELGLHLIACCGRADLEQLEFLRDAGIHSYNHNLETSQNFFPKICSTHTWEERFITCENALRAGLGLCSGGIFG
LNESWEDRIEMLRALASLSPHTTPINFFIKNPVLPIDAETLSADEALECVLLAKEFLPNARLMVAGGREVVFKDNDKKEA
KLFEYGINAVVLGDYLTTKGKAPKKDIEKLLSYGLTMATSCH

Sequences:

>Translated_282_residues
MQEIFLCSISNVRSGDCKEDCAYCTQSSHHQGAIKRYKFKDEKVVLQEARALRELGALGFCLVTSGRELDDEKCEYIAKL
AKAINQEELGLHLIACCGRADLEQLEFLRDAGIHSYNHNLETSQNFFPKICSTHTWEERFITCENALRAGLGLCSGGIFG
LNESWEDRIEMLRALASLSPHTTPINFFIKNPVLPIDAETLSADEALECVLLAKEFLPNARLMVAGGREVVFKDNDKKEA
KLFEYGINAVVLGDYLTTKGKAPKKDIEKLLSYGLTMATSCH
>Mature_282_residues
MQEIFLCSISNVRSGDCKEDCAYCTQSSHHQGAIKRYKFKDEKVVLQEARALRELGALGFCLVTSGRELDDEKCEYIAKL
AKAINQEELGLHLIACCGRADLEQLEFLRDAGIHSYNHNLETSQNFFPKICSTHTWEERFITCENALRAGLGLCSGGIFG
LNESWEDRIEMLRALASLSPHTTPINFFIKNPVLPIDAETLSADEALECVLLAKEFLPNARLMVAGGREVVFKDNDKKEA
KLFEYGINAVVLGDYLTTKGKAPKKDIEKLLSYGLTMATSCH

Specific function: Catalyzes the conversion of dethiobiotin (DTB) to biotin by the insertion of a sulfur atom into dethiobiotin via a radical- based mechanism [H]

COG id: COG0502

COG function: function code H; Biotin synthase and related enzymes

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the radical SAM superfamily. Biotin synthase family [H]

Homologues:

Organism=Escherichia coli, GI1786992, Length=278, Percent_Identity=29.4964028776978, Blast_Score=146, Evalue=2e-36,
Organism=Saccharomyces cerevisiae, GI6321725, Length=285, Percent_Identity=31.2280701754386, Blast_Score=148, Evalue=1e-36,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013785
- InterPro:   IPR010722
- InterPro:   IPR002684
- InterPro:   IPR006638
- InterPro:   IPR007197 [H]

Pfam domain/function: PF06968 BATS; PF04055 Radical_SAM [H]

EC number: =2.8.1.6 [H]

Molecular weight: Translated: 31476; Mature: 31476

Theoretical pI: Translated: 5.64; Mature: 5.64

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.6 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
6.0 %Cys+Met (Translated Protein)
4.6 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
6.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQEIFLCSISNVRSGDCKEDCAYCTQSSHHQGAIKRYKFKDEKVVLQEARALRELGALGF
CCCEEEEECCCCCCCCCHHHHHHHHCCCCCCCHHHHHCCCCHHHHHHHHHHHHHHCCCEE
CLVTSGRELDDEKCEYIAKLAKAINQEELGLHLIACCGRADLEQLEFLRDAGIHSYNHNL
EEEECCCCCCHHHHHHHHHHHHHHCHHHHCCHHEECCCCCCHHHHHHHHHCCCCCCCCCC
ETSQNFFPKICSTHTWEERFITCENALRAGLGLCSGGIFGLNESWEDRIEMLRALASLSP
CCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCC
HTTPINFFIKNPVLPIDAETLSADEALECVLLAKEFLPNARLMVAGGREVVFKDNDKKEA
CCCCEEEEECCCCCCCCHHHCCHHHHHHHHHHHHHHCCCCEEEEECCCEEEEECCCCHHH
KLFEYGINAVVLGDYLTTKGKAPKKDIEKLLSYGLTMATSCH
HHHHHCCCEEEECCHHHCCCCCCHHHHHHHHHCCCHHHCCCC
>Mature Secondary Structure
MQEIFLCSISNVRSGDCKEDCAYCTQSSHHQGAIKRYKFKDEKVVLQEARALRELGALGF
CCCEEEEECCCCCCCCCHHHHHHHHCCCCCCCHHHHHCCCCHHHHHHHHHHHHHHCCCEE
CLVTSGRELDDEKCEYIAKLAKAINQEELGLHLIACCGRADLEQLEFLRDAGIHSYNHNL
EEEECCCCCCHHHHHHHHHHHHHHCHHHHCCHHEECCCCCCHHHHHHHHHCCCCCCCCCC
ETSQNFFPKICSTHTWEERFITCENALRAGLGLCSGGIFGLNESWEDRIEMLRALASLSP
CCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCC
HTTPINFFIKNPVLPIDAETLSADEALECVLLAKEFLPNARLMVAGGREVVFKDNDKKEA
CCCCEEEEECCCCCCCCHHHCCHHHHHHHHHHHHHHCCCCEEEEECCCEEEEECCCCHHH
KLFEYGINAVVLGDYLTTKGKAPKKDIEKLLSYGLTMATSCH
HHHHHCCCEEEECCHHHCCCCCCHHHHHHHHHCCCHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA