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The map label for this gene is 108563740

Identifier: 108563740

GI number: 108563740

Start: 1362280

End: 1364655

Strand: Direct

Name: 108563740

Synonym: HPAG1_1315

Alternate gene names: NA

Gene position: 1362280-1364655 (Clockwise)

Preceding gene: 108563739

Following gene: 108563741

Centisome position: 85.34

GC content: 34.97

Gene sequence:

>2376_bases
ATGGCAAAGAAAAAAGATTTAACCACCGATAATGAAATTTTTGTCGCACAAAAACTCGCTGAAGACGAACTAAACACTAA
CGAGATTAACGAGCCATTAGAAAGGCTAGACTTTAAAAGCTTTGATAATAATAAGGAGCTTTTAGATTACCAACAGCAAG
CTTTGATTAACGCTTTTAGAATGCTTACCGCTTATTTTAGAGATTTCAAAGAAAATAAAAAAGAATTTTACGCTTTTTAT
CAAAAACATTATTCATTCGCCAATTGCGATTTCGCTAAAAAGAAACTCAATCCTTTGTTAAAGAGCCATTTTAAGGTAGA
AAATCAGCGCGTGAGTTTTGAAAATTTTATCAACCGATTAGCCTTTTACATGGCCACAGGGAGCGGTAAAACGATTGTCA
TTATCAAACTGGTAGAGCTTTTAAGCGTGGCTATAAGAATGGGTTTGATCCCTAAGAAAAATATCATGTTTTTTAGCGCG
AATGAAAATTTGATCAAGCAATTTGAAAAAGAAATTGAAAAATACAACCGGGGTAAGGACTATTTTAAGCAAATTGATTT
CAAAAGCCTTAAAAGCGTTACCAATAAGGATTTTTACCGCGCTCCAAAAGATTTTTTCATAGAAAAAATCACCCTTTTTT
ATTACCGAGCGGATTTAATGAATGATGAAGAAAGCAAGGAAAACCTTTTAAATTATAAGGATTATTGGGATAATGGGGAA
AACTATGTGATTTTAGATGAAGCGCATAAGGGGAACAAGTCTGAGAGCAAAAGGCAAGCGATTTTTAGTCTGCTGTCTTT
AAAGGGGTTTTTATTCAATTTCAGCGCCACTTTCACCGAAGAGAGCGATCTCATCACTGCGGTGTATAATTTGAGCGTGG
GCGAGTGGGTGAAGCTTGGCTATGGTAAAGAGTCTATTTTATTGAAGAAAAACAATTTAAACGCTTTTAAGGAATTAAAA
GATTTAAACGATAGGGAAAAAGAAATCGCTCTTTTAAAAGCGTTATTGCTTTTAGGCATGCAAAAACGCTATAAAACAGA
AGGCTATTTTTACGACCCTTTAATGCTCGTGTTCACGCATTCTGTGAATGTTAAAAACAGCGATGCGGAAATCTTTTTTA
AAACTTTAGCGCACGTGATTGAAAATGACGATGGAAGCGATTTTTTAAAGGCTAAAGACGATTTATTAGAAGAATTAAAG
AATCCGGAATTTCTTTTTAGCGATGGCAAAGATCAAAACTATAAGATTGAGGTTTTTAAAGAGGGCTTAAAGAGCATGGA
TTTTAAAGGCTTAAAAGAAGAAGTTTTTTATGCCAGTAACGGGCATATTGAAGTCATCATTAACCCTAAAAACAACCAAG
AAATCGCTTTCAAGCTCAACACAAGCGATAAAGTCTTTTGCTTGATTAGAATAGGCGATATTACCGAATGGATTTGTGAA
AAATTAAAGAGCGTGAAGGTGGTGAGCAAAAATTTAAGCTTTAAAGAAGAGAGCTATTTCAGCCAGATTGATAAGAGCAG
CATCAATATCTTAGTGGGGTCTCGCACTTTTGACACCGGCTGGGATAGCACAAGGCCTAGCGTGATTTTATTTTTAAATA
TAGGGCTTGATGATGACGCTAAAAAGTTGGTGAAACAATCTTTTGGCAGGGGCGTAAGGATTGAAAGCGTCAAAAACCAA
CGCCAAAGGTTAGCGTATTTAGACATAGATGAAGCTATTAAAAAAGATTTGAAACCAAACGCTGCAATGCTGGAAACGCT
TTTTGTGATACCCACTAATTATGCAAGCCTTGAAGCGATTTTAAAGTTCCAAAAAGAGAGCGAAAATAAGGGTGAGAATA
GAGGCTCATGGCGTGAAATCAAATTAGAAAAAACGCCCATAAAACACGCATTATTCGTGCCTTGCTACCGCAAAGAACAA
AAAAGCATTTCTGAACTTCCTGAAAGCGCTTCGTTTAAAATGAGCGAAAAAAATTTTAAGGATTTAAAAGAGTATTTTCA
TTTAATGAGCGAAAAGCATTTTATTTTAAAGCATGAGATTTATAACCCTAAAGATTATGCGCAGTTAAAAGAAATGATAC
AAACAGCGCATTTTAAAAAGGTATCAACTTGGCATTATAAAGATTTAGATTACATGATTTCTGAAATTAAAGGCAAGCTA
TACCCCAATCAAAAAGTGCCTAAAGACGAGTTTAACGCCCTAGATAGTGAGAAAATCGTGCATTTTAAAAGGGTTAAAGT
TAAGGCGGATAAAAAAGAAGAATTGGTTAAAACCATCCAAGAAGTGAAAGAGTATGCACCTTTGGATAAAGAAACTCTAA
GAAAAAAAATCGCGCAAGGCGAGATCGATCCTTATGATACAGAAAAGCACAAATAA

Upstream 100 bases:

>100_bases
GAGTTTTTTAATGAAAAGGTGGTGAAATTTAAAGGGAATGATAAAGAAGTAGAGATCTTAAAAGCCTTAAAAGAAGCGCT
CATTTGGTAAGGAGAAAATC

Downstream 100 bases:

>100_bases
AACAAAACCTTTAAAGTTGGTGATGCTGAGCTGTTAAAGCTCAAGGAGCATTACTACACCCCGCTCATTAAAGCCAAAAA
CTGCGATTGGCTTAAGCATG

Product: type III restriction enzyme R protein

Products: NA

Alternate protein names: Type III Restriction Protein Res Subunit; Type III Restriction Res Subunit; Type III Restriction- System Restriction Subunit; Type III R-M System Restriction

Number of amino acids: Translated: 791; Mature: 790

Protein sequence:

>791_residues
MAKKKDLTTDNEIFVAQKLAEDELNTNEINEPLERLDFKSFDNNKELLDYQQQALINAFRMLTAYFRDFKENKKEFYAFY
QKHYSFANCDFAKKKLNPLLKSHFKVENQRVSFENFINRLAFYMATGSGKTIVIIKLVELLSVAIRMGLIPKKNIMFFSA
NENLIKQFEKEIEKYNRGKDYFKQIDFKSLKSVTNKDFYRAPKDFFIEKITLFYYRADLMNDEESKENLLNYKDYWDNGE
NYVILDEAHKGNKSESKRQAIFSLLSLKGFLFNFSATFTEESDLITAVYNLSVGEWVKLGYGKESILLKKNNLNAFKELK
DLNDREKEIALLKALLLLGMQKRYKTEGYFYDPLMLVFTHSVNVKNSDAEIFFKTLAHVIENDDGSDFLKAKDDLLEELK
NPEFLFSDGKDQNYKIEVFKEGLKSMDFKGLKEEVFYASNGHIEVIINPKNNQEIAFKLNTSDKVFCLIRIGDITEWICE
KLKSVKVVSKNLSFKEESYFSQIDKSSINILVGSRTFDTGWDSTRPSVILFLNIGLDDDAKKLVKQSFGRGVRIESVKNQ
RQRLAYLDIDEAIKKDLKPNAAMLETLFVIPTNYASLEAILKFQKESENKGENRGSWREIKLEKTPIKHALFVPCYRKEQ
KSISELPESASFKMSEKNFKDLKEYFHLMSEKHFILKHEIYNPKDYAQLKEMIQTAHFKKVSTWHYKDLDYMISEIKGKL
YPNQKVPKDEFNALDSEKIVHFKRVKVKADKKEELVKTIQEVKEYAPLDKETLRKKIAQGEIDPYDTEKHK

Sequences:

>Translated_791_residues
MAKKKDLTTDNEIFVAQKLAEDELNTNEINEPLERLDFKSFDNNKELLDYQQQALINAFRMLTAYFRDFKENKKEFYAFY
QKHYSFANCDFAKKKLNPLLKSHFKVENQRVSFENFINRLAFYMATGSGKTIVIIKLVELLSVAIRMGLIPKKNIMFFSA
NENLIKQFEKEIEKYNRGKDYFKQIDFKSLKSVTNKDFYRAPKDFFIEKITLFYYRADLMNDEESKENLLNYKDYWDNGE
NYVILDEAHKGNKSESKRQAIFSLLSLKGFLFNFSATFTEESDLITAVYNLSVGEWVKLGYGKESILLKKNNLNAFKELK
DLNDREKEIALLKALLLLGMQKRYKTEGYFYDPLMLVFTHSVNVKNSDAEIFFKTLAHVIENDDGSDFLKAKDDLLEELK
NPEFLFSDGKDQNYKIEVFKEGLKSMDFKGLKEEVFYASNGHIEVIINPKNNQEIAFKLNTSDKVFCLIRIGDITEWICE
KLKSVKVVSKNLSFKEESYFSQIDKSSINILVGSRTFDTGWDSTRPSVILFLNIGLDDDAKKLVKQSFGRGVRIESVKNQ
RQRLAYLDIDEAIKKDLKPNAAMLETLFVIPTNYASLEAILKFQKESENKGENRGSWREIKLEKTPIKHALFVPCYRKEQ
KSISELPESASFKMSEKNFKDLKEYFHLMSEKHFILKHEIYNPKDYAQLKEMIQTAHFKKVSTWHYKDLDYMISEIKGKL
YPNQKVPKDEFNALDSEKIVHFKRVKVKADKKEELVKTIQEVKEYAPLDKETLRKKIAQGEIDPYDTEKHK
>Mature_790_residues
AKKKDLTTDNEIFVAQKLAEDELNTNEINEPLERLDFKSFDNNKELLDYQQQALINAFRMLTAYFRDFKENKKEFYAFYQ
KHYSFANCDFAKKKLNPLLKSHFKVENQRVSFENFINRLAFYMATGSGKTIVIIKLVELLSVAIRMGLIPKKNIMFFSAN
ENLIKQFEKEIEKYNRGKDYFKQIDFKSLKSVTNKDFYRAPKDFFIEKITLFYYRADLMNDEESKENLLNYKDYWDNGEN
YVILDEAHKGNKSESKRQAIFSLLSLKGFLFNFSATFTEESDLITAVYNLSVGEWVKLGYGKESILLKKNNLNAFKELKD
LNDREKEIALLKALLLLGMQKRYKTEGYFYDPLMLVFTHSVNVKNSDAEIFFKTLAHVIENDDGSDFLKAKDDLLEELKN
PEFLFSDGKDQNYKIEVFKEGLKSMDFKGLKEEVFYASNGHIEVIINPKNNQEIAFKLNTSDKVFCLIRIGDITEWICEK
LKSVKVVSKNLSFKEESYFSQIDKSSINILVGSRTFDTGWDSTRPSVILFLNIGLDDDAKKLVKQSFGRGVRIESVKNQR
QRLAYLDIDEAIKKDLKPNAAMLETLFVIPTNYASLEAILKFQKESENKGENRGSWREIKLEKTPIKHALFVPCYRKEQK
SISELPESASFKMSEKNFKDLKEYFHLMSEKHFILKHEIYNPKDYAQLKEMIQTAHFKKVSTWHYKDLDYMISEIKGKLY
PNQKVPKDEFNALDSEKIVHFKRVKVKADKKEELVKTIQEVKEYAPLDKETLRKKIAQGEIDPYDTEKHK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 92701; Mature: 92570

Theoretical pI: Translated: 9.02; Mature: 9.02

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAKKKDLTTDNEIFVAQKLAEDELNTNEINEPLERLDFKSFDNNKELLDYQQQALINAFR
CCCCCCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHH
MLTAYFRDFKENKKEFYAFYQKHYSFANCDFAKKKLNPLLKSHFKVENQRVSFENFINRL
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCEECHHHHHHHH
AFYMATGSGKTIVIIKLVELLSVAIRMGLIPKKNIMFFSANENLIKQFEKEIEKYNRGKD
HHHEECCCCCEEEHHHHHHHHHHHHHHCCCCCCCEEEEECCHHHHHHHHHHHHHHHCCHH
YFKQIDFKSLKSVTNKDFYRAPKDFFIEKITLFYYRADLMNDEESKENLLNYKDYWDNGE
HHHHCCHHHHHHHHCCHHHCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCHHHCCCCC
NYVILDEAHKGNKSESKRQAIFSLLSLKGFLFNFSATFTEESDLITAVYNLSVGEWVKLG
CEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHCCEECCCCCCCCEEEEEECCHHHHHEEC
YGKESILLKKNNLNAFKELKDLNDREKEIALLKALLLLGMQKRYKTEGYFYDPLMLVFTH
CCCCEEEEEECCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEECCHHHHHEE
SVNVKNSDAEIFFKTLAHVIENDDGSDFLKAKDDLLEELKNPEFLFSDGKDQNYKIEVFK
CCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCEEEECCCCCCEEHHHHH
EGLKSMDFKGLKEEVFYASNGHIEVIINPKNNQEIAFKLNTSDKVFCLIRIGDITEWICE
HHHHHCCCCCCHHHHEEECCCEEEEEECCCCCCEEEEEECCCCCEEEEEEECCHHHHHHH
KLKSVKVVSKNLSFKEESYFSQIDKSSINILVGSRTFDTGWDSTRPSVILFLNIGLDDDA
HHHHHHHHHHCCCCHHHHHHHHHCCCCEEEEEECCEECCCCCCCCCCEEEEEECCCCHHH
KKLVKQSFGRGVRIESVKNQRQRLAYLDIDEAIKKDLKPNAAMLETLFVIPTNYASLEAI
HHHHHHHHCCCEEEHHHHHHHHHEEECCHHHHHHHCCCCCHHHHHHHEEECCCHHHHHHH
LKFQKESENKGENRGSWREIKLEKTPIKHALFVPCYRKEQKSISELPESASFKMSEKNFK
HHHHHHCCCCCCCCCCCEEEEEECCCCCCEEECCCHHHHHHHHHHCCCCCCCCCCCCHHH
DLKEYFHLMSEKHFILKHEIYNPKDYAQLKEMIQTAHFKKVSTWHYKDLDYMISEIKGKL
HHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCC
YPNQKVPKDEFNALDSEKIVHFKRVKVKADKKEELVKTIQEVKEYAPLDKETLRKKIAQG
CCCCCCCHHHHCCCCCHHHEEEEEEEECCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHCC
EIDPYDTEKHK
CCCCCCCCCCC
>Mature Secondary Structure 
AKKKDLTTDNEIFVAQKLAEDELNTNEINEPLERLDFKSFDNNKELLDYQQQALINAFR
CCCCCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHH
MLTAYFRDFKENKKEFYAFYQKHYSFANCDFAKKKLNPLLKSHFKVENQRVSFENFINRL
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCEECHHHHHHHH
AFYMATGSGKTIVIIKLVELLSVAIRMGLIPKKNIMFFSANENLIKQFEKEIEKYNRGKD
HHHEECCCCCEEEHHHHHHHHHHHHHHCCCCCCCEEEEECCHHHHHHHHHHHHHHHCCHH
YFKQIDFKSLKSVTNKDFYRAPKDFFIEKITLFYYRADLMNDEESKENLLNYKDYWDNGE
HHHHCCHHHHHHHHCCHHHCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCHHHCCCCC
NYVILDEAHKGNKSESKRQAIFSLLSLKGFLFNFSATFTEESDLITAVYNLSVGEWVKLG
CEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHCCEECCCCCCCCEEEEEECCHHHHHEEC
YGKESILLKKNNLNAFKELKDLNDREKEIALLKALLLLGMQKRYKTEGYFYDPLMLVFTH
CCCCEEEEEECCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEECCHHHHHEE
SVNVKNSDAEIFFKTLAHVIENDDGSDFLKAKDDLLEELKNPEFLFSDGKDQNYKIEVFK
CCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCEEEECCCCCCEEHHHHH
EGLKSMDFKGLKEEVFYASNGHIEVIINPKNNQEIAFKLNTSDKVFCLIRIGDITEWICE
HHHHHCCCCCCHHHHEEECCCEEEEEECCCCCCEEEEEECCCCCEEEEEEECCHHHHHHH
KLKSVKVVSKNLSFKEESYFSQIDKSSINILVGSRTFDTGWDSTRPSVILFLNIGLDDDA
HHHHHHHHHHCCCCHHHHHHHHHCCCCEEEEEECCEECCCCCCCCCCEEEEEECCCCHHH
KKLVKQSFGRGVRIESVKNQRQRLAYLDIDEAIKKDLKPNAAMLETLFVIPTNYASLEAI
HHHHHHHHCCCEEEHHHHHHHHHEEECCHHHHHHHCCCCCHHHHHHHEEECCCHHHHHHH
LKFQKESENKGENRGSWREIKLEKTPIKHALFVPCYRKEQKSISELPESASFKMSEKNFK
HHHHHHCCCCCCCCCCCEEEEEECCCCCCEEECCCHHHHHHHHHHCCCCCCCCCCCCHHH
DLKEYFHLMSEKHFILKHEIYNPKDYAQLKEMIQTAHFKKVSTWHYKDLDYMISEIKGKL
HHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCC
YPNQKVPKDEFNALDSEKIVHFKRVKVKADKKEELVKTIQEVKEYAPLDKETLRKKIAQG
CCCCCCCHHHHCCCCCHHHEEEEEEEECCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHCC
EIDPYDTEKHK
CCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA