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The map label for this gene is 108563741

Identifier: 108563741

GI number: 108563741

Start: 1364755

End: 1365189

Strand: Direct

Name: 108563741

Synonym: HPAG1_1316

Alternate gene names: NA

Gene position: 1364755-1365189 (Clockwise)

Preceding gene: 108563740

Following gene: 108563749

Centisome position: 85.49

GC content: 34.94

Gene sequence:

>435_bases
GTGGTTAAAGTAAAGAGCGAGAGCGATTTTTTAGAAGAGTTGTTAAAGATTACAGAAACGCTTCAAGAAAACTATAATTT
TTGGGCGTTCAGCAAGATTGATGAGCATTTAGACAATTTGTTTATCCCTTACATAGACAACGGCGCTACAGAAAGGAAAT
TTTTCCCTGATTTTATCTTTTGGTTGCAAAAGAGCGGCACGCAGATCATTTGCTTCATTGATCCTAAAGGGAGCAAACAC
ACTGATTACGAACATAAGGCAGATGCGTATAAACTTTTTAAAGATAAGGTTTTTAACCCTAAAGACGATCCAAATTTCAA
AATCAAAGTGGTTTTAAAATTTTATGGGAATAAAGATGAGGTGGCGGATGGTTATAGGGATTATTGGATTAAAAAAGGGA
AACTAGAAGATTTTTTTCTGACCTTGATAGCCTAA

Upstream 100 bases:

>100_bases
AAACAAAACCTTTAAAGTTGGTGATGCTGAGCTGTTAAAGCTCAAGGAGCATTACTACACCCCGCTCATTAAAGCCAAAA
ACTGCGATTGGCTTAAGCAT

Downstream 100 bases:

>100_bases
ATTTATTGAAAGGGGTTAAAAGATCCGCTTAAATCAGCCTTGAATATAAGGCTAGTTTTTCACATCGCTTAAAAACACAT
GCCTTAAAAGTTTGGCGTCG

Product: type III restriction enzyme R protein

Products: NA

Alternate protein names: Type III Restriction Protein Res Subunit; Type III Restriction Res Subunit; Type III Restriction- System Restriction Subunit; Type III R-M System Restriction

Number of amino acids: Translated: 144; Mature: 144

Protein sequence:

>144_residues
MVKVKSESDFLEELLKITETLQENYNFWAFSKIDEHLDNLFIPYIDNGATERKFFPDFIFWLQKSGTQIICFIDPKGSKH
TDYEHKADAYKLFKDKVFNPKDDPNFKIKVVLKFYGNKDEVADGYRDYWIKKGKLEDFFLTLIA

Sequences:

>Translated_144_residues
MVKVKSESDFLEELLKITETLQENYNFWAFSKIDEHLDNLFIPYIDNGATERKFFPDFIFWLQKSGTQIICFIDPKGSKH
TDYEHKADAYKLFKDKVFNPKDDPNFKIKVVLKFYGNKDEVADGYRDYWIKKGKLEDFFLTLIA
>Mature_144_residues
MVKVKSESDFLEELLKITETLQENYNFWAFSKIDEHLDNLFIPYIDNGATERKFFPDFIFWLQKSGTQIICFIDPKGSKH
TDYEHKADAYKLFKDKVFNPKDDPNFKIKVVLKFYGNKDEVADGYRDYWIKKGKLEDFFLTLIA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17143; Mature: 17143

Theoretical pI: Translated: 5.74; Mature: 5.74

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVKVKSESDFLEELLKITETLQENYNFWAFSKIDEHLDNLFIPYIDNGATERKFFPDFIF
CEEECCHHHHHHHHHHHHHHHHHCCCEEEEHHHHHHHHCEECEEECCCCCCCHHHHHHHH
WLQKSGTQIICFIDPKGSKHTDYEHKADAYKLFKDKVFNPKDDPNFKIKVVLKFYGNKDE
HHHCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCEEEEEEEEEECCCHH
VADGYRDYWIKKGKLEDFFLTLIA
HHCCHHHHHCCCCCHHHHHHEECC
>Mature Secondary Structure
MVKVKSESDFLEELLKITETLQENYNFWAFSKIDEHLDNLFIPYIDNGATERKFFPDFIF
CEEECCHHHHHHHHHHHHHHHHHCCCEEEEHHHHHHHHCEECEEECCCCCCCHHHHHHHH
WLQKSGTQIICFIDPKGSKHTDYEHKADAYKLFKDKVFNPKDDPNFKIKVVLKFYGNKDE
HHHCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCEEEEEEEEEECCCHH
VADGYRDYWIKKGKLEDFFLTLIA
HHCCHHHHHCCCCCHHHHHHEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA