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The map label for this gene is dcd [H]

Identifier: 108563445

GI number: 108563445

Start: 1076827

End: 1077399

Strand: Reverse

Name: dcd [H]

Synonym: HPAG1_1020

Alternate gene names: 108563445

Gene position: 1077399-1076827 (Counterclockwise)

Preceding gene: 108563458

Following gene: 108563444

Centisome position: 67.49

GC content: 41.71

Gene sequence:

>573_bases
GTGCGTATGGGATTGAAAGCGGATTCTTGGATTAAAAAAATGAGTTTAGAGCATGGCATGATTAGCCCTTTTTGCGAAAA
GCAAGTCGGTAAGAATGTGATCAGTTATGGTTTGAGCAGTTATGGGTATGATATTAGGGTGGGGAGTGAGTTCATGCTCT
TTGATAACAAAAACGCTTTAATTGACCCTAAAAACTTTGACCCTAACAACGCGACTAAAATTGATGCGAGTAAAGAAGGC
TTTTTTATCTTGCCCGCTAATGCGTTCGCCCTAGCCCATACGATAGAGTACTTTAAAATGCCTAAAGACACCTTAGCGAT
TTGTTTAGGCAAAAGCACTTACGCCAGGTGTGGGATCATTGTGAATGTTACGCCTTTTGAGCCGGAATTTGAAGGCTATA
TCACGATTGAAATTTCTAACACCACCAATTTACCGGCTAAAGTCTATGCCAATGAGGGGATCGCGCAAGTGGTGTTTTTG
CAAGGCGATGAAATGTGCGAGCAAAGCTATAAAGACAGAGGCGGTAAGTATCAAGGGCAAGTGGGCATCACTTTGCCTAA
AATTTTAAAGTGA

Upstream 100 bases:

>100_bases
ATTATTTTAAAATATGCCACAAACACATAATCTTACTAAGCGTTTTTAGCAAAAAATTATTGTTATAATAACATAATTAT
TAACAAACTTTAAAGGCTTT

Downstream 100 bases:

>100_bases
TTTGAAGAAAGATAAAAGCGCTTATCCTTGTGAGCGTTGTTTATTTTTAAATACAAACAATACCGCAATTTCTCAAAAAT
GTTTTATAATACGAAAATTC

Product: deoxycytidine triphosphate deaminase

Products: NA

Alternate protein names: dCTP deaminase [H]

Number of amino acids: Translated: 190; Mature: 190

Protein sequence:

>190_residues
MRMGLKADSWIKKMSLEHGMISPFCEKQVGKNVISYGLSSYGYDIRVGSEFMLFDNKNALIDPKNFDPNNATKIDASKEG
FFILPANAFALAHTIEYFKMPKDTLAICLGKSTYARCGIIVNVTPFEPEFEGYITIEISNTTNLPAKVYANEGIAQVVFL
QGDEMCEQSYKDRGGKYQGQVGITLPKILK

Sequences:

>Translated_190_residues
MRMGLKADSWIKKMSLEHGMISPFCEKQVGKNVISYGLSSYGYDIRVGSEFMLFDNKNALIDPKNFDPNNATKIDASKEG
FFILPANAFALAHTIEYFKMPKDTLAICLGKSTYARCGIIVNVTPFEPEFEGYITIEISNTTNLPAKVYANEGIAQVVFL
QGDEMCEQSYKDRGGKYQGQVGITLPKILK
>Mature_190_residues
MRMGLKADSWIKKMSLEHGMISPFCEKQVGKNVISYGLSSYGYDIRVGSEFMLFDNKNALIDPKNFDPNNATKIDASKEG
FFILPANAFALAHTIEYFKMPKDTLAICLGKSTYARCGIIVNVTPFEPEFEGYITIEISNTTNLPAKVYANEGIAQVVFL
QGDEMCEQSYKDRGGKYQGQVGITLPKILK

Specific function: De novo synthesis of thymidylate. [C]

COG id: COG0717

COG function: function code F; Deoxycytidine deaminase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the dCTP deaminase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011962
- InterPro:   IPR008180 [H]

Pfam domain/function: PF00692 dUTPase [H]

EC number: =3.5.4.13 [H]

Molecular weight: Translated: 21176; Mature: 21176

Theoretical pI: Translated: 7.28; Mature: 7.28

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
5.8 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
5.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRMGLKADSWIKKMSLEHGMISPFCEKQVGKNVISYGLSSYGYDIRVGSEFMLFDNKNAL
CCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCEEEEECCEEEEEECCCCE
IDPKNFDPNNATKIDASKEGFFILPANAFALAHTIEYFKMPKDTLAICLGKSTYARCGII
ECCCCCCCCCCEEECCCCCCEEEECCCHHHHHHHHHHHHCCCHHEEEEECCCCHHHCEEE
VNVTPFEPEFEGYITIEISNTTNLPAKVYANEGIAQVVFLQGDEMCEQSYKDRGGKYQGQ
EEECCCCCCCCCEEEEEECCCCCCCEEEEECCCEEEEEEECCHHHHHHHHHHCCCEECCE
VGITLPKILK
ECCCCHHHCC
>Mature Secondary Structure
MRMGLKADSWIKKMSLEHGMISPFCEKQVGKNVISYGLSSYGYDIRVGSEFMLFDNKNAL
CCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCEEEEECCEEEEEECCCCE
IDPKNFDPNNATKIDASKEGFFILPANAFALAHTIEYFKMPKDTLAICLGKSTYARCGII
ECCCCCCCCCCEEECCCCCCEEEECCCHHHHHHHHHHHHCCCHHEEEEECCCCHHHCEEE
VNVTPFEPEFEGYITIEISNTTNLPAKVYANEGIAQVVFLQGDEMCEQSYKDRGGKYQGQ
EEECCCCCCCCCEEEEEECCCCCCCEEEEECCCEEEEEEECCHHHHHHHHHHCCCEECCE
VGITLPKILK
ECCCCHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA