Click here to switch to the map view.

The map label for this gene is 108563244

Identifier: 108563244

GI number: 108563244

Start: 853152

End: 854036

Strand: Reverse

Name: 108563244

Synonym: HPAG1_0819

Alternate gene names: NA

Gene position: 854036-853152 (Counterclockwise)

Preceding gene: 108563253

Following gene: 108563243

Centisome position: 53.5

GC content: 34.58

Gene sequence:

>885_bases
TTGTTTTTAGTCAAAAAAATAGGCGTGGTAGTAGTGGTTTTAATGTGCTTTTTAGCTTGCTCGCAAGAGAGGTTTATTAA
GTTGCAAAAAAAAGCCCAAGAGCAAGAAAATGACGGCTCTAAACGCCCTAGCTATGTGGATTCGGATTATGAAGTCTTTA
GCGAAACGATTTTTTTAAAAAACATGGTGTATCAGCCTACAAATGAAAGAAACGCTTTTTTCCAACTAACTAAAGATGAA
GATGATTCTTTTAACCCCGAAACTCCTGTGATTTTATTGAATGAGCCAAGCGATAACGACACAAAAAACCCGCCCTTAAA
CCAAAATGAGTCTAATAACAACACTGCCAATAACGATACAAAAAACCCGTTCCTTTACAAACCAAAAAGAAAAACAAAAA
ATCCAAAACTCATTGAATATTCCCAACAAAATTTCTACCCCCTAAAAAATGGGGATATTATGATGAGTAAAGAAGGGGAT
CAATGGTTGGTAGAAATCAAATCCAAAGCCTTGAAGCGTTTTTTAAAAGATCAAAACGATAAAGATCGCCAGATCCAAAC
TTTCACTTTTAATGACACTAAAACGCAAATCGCACAATTTAAGGGCAAAATTTCTTCGTATGTTTATACCACCAATAACA
GCGATTTGAGTTTAAGGCCCTTTTATGAATCCTTTTTGTTAGAAAAAAAGAGCGATGATTTTTATACGATAGTGGATAAG
GCTTTAGACGCCATTGAGATTTCAAAGTGTCAAATGGTGTTAAAAAAGCATTCAACCGATAAATTAGACAGCCAGCATAA
AGCCATCAGTATTGATTTGGATTTTAAAAAAGAGCGTTTTAAGAGCGATACGGAACTTTTTTTAGAATGCCTTAAGGAAA
GTTAG

Upstream 100 bases:

>100_bases
TAAAGTTTTATGGCTTGTATTCATCTTTTTTATCGCTTCAATTTAATCAAAATTAGATTACAATATTATAGTTATTTAAA
GCTTAAATAAGGGTCTAGCG

Downstream 100 bases:

>100_bases
GGCGTTTATTACGACAATTTAGATTTTTTTGGGTAGCATGTTAGCGTTTCAAAGGCATGGATATTGTTAAAAAGTAAGCT
AAGGAATGTTTATGTGGATC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 294; Mature: 294

Protein sequence:

>294_residues
MFLVKKIGVVVVVLMCFLACSQERFIKLQKKAQEQENDGSKRPSYVDSDYEVFSETIFLKNMVYQPTNERNAFFQLTKDE
DDSFNPETPVILLNEPSDNDTKNPPLNQNESNNNTANNDTKNPFLYKPKRKTKNPKLIEYSQQNFYPLKNGDIMMSKEGD
QWLVEIKSKALKRFLKDQNDKDRQIQTFTFNDTKTQIAQFKGKISSYVYTTNNSDLSLRPFYESFLLEKKSDDFYTIVDK
ALDAIEISKCQMVLKKHSTDKLDSQHKAISIDLDFKKERFKSDTELFLECLKES

Sequences:

>Translated_294_residues
MFLVKKIGVVVVVLMCFLACSQERFIKLQKKAQEQENDGSKRPSYVDSDYEVFSETIFLKNMVYQPTNERNAFFQLTKDE
DDSFNPETPVILLNEPSDNDTKNPPLNQNESNNNTANNDTKNPFLYKPKRKTKNPKLIEYSQQNFYPLKNGDIMMSKEGD
QWLVEIKSKALKRFLKDQNDKDRQIQTFTFNDTKTQIAQFKGKISSYVYTTNNSDLSLRPFYESFLLEKKSDDFYTIVDK
ALDAIEISKCQMVLKKHSTDKLDSQHKAISIDLDFKKERFKSDTELFLECLKES
>Mature_294_residues
MFLVKKIGVVVVVLMCFLACSQERFIKLQKKAQEQENDGSKRPSYVDSDYEVFSETIFLKNMVYQPTNERNAFFQLTKDE
DDSFNPETPVILLNEPSDNDTKNPPLNQNESNNNTANNDTKNPFLYKPKRKTKNPKLIEYSQQNFYPLKNGDIMMSKEGD
QWLVEIKSKALKRFLKDQNDKDRQIQTFTFNDTKTQIAQFKGKISSYVYTTNNSDLSLRPFYESFLLEKKSDDFYTIVDK
ALDAIEISKCQMVLKKHSTDKLDSQHKAISIDLDFKKERFKSDTELFLECLKES

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 34347; Mature: 34347

Theoretical pI: Translated: 7.29; Mature: 7.29

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFLVKKIGVVVVVLMCFLACSQERFIKLQKKAQEQENDGSKRPSYVDSDYEVFSETIFLK
CCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHH
NMVYQPTNERNAFFQLTKDEDDSFNPETPVILLNEPSDNDTKNPPLNQNESNNNTANNDT
HHHCCCCCCCCEEEEEECCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCC
KNPFLYKPKRKTKNPKLIEYSQQNFYPLKNGDIMMSKEGDQWLVEIKSKALKRFLKDQND
CCCEEECCCCCCCCCCEEEECCCCEEECCCCCEEEECCCCHHHHHHHHHHHHHHHHCCCC
KDRQIQTFTFNDTKTQIAQFKGKISSYVYTTNNSDLSLRPFYESFLLEKKSDDFYTIVDK
CCCEEEEEEECCHHHHHHHHHHHHHEEEEECCCCCEEEHHHHHHHHHHCCCCCHHHHHHH
ALDAIEISKCQMVLKKHSTDKLDSQHKAISIDLDFKKERFKSDTELFLECLKES
HHHHHHHHHHHHHHHHCCCHHCCCCCCEEEEEECCCHHHHCCHHHHHHHHHHCC
>Mature Secondary Structure
MFLVKKIGVVVVVLMCFLACSQERFIKLQKKAQEQENDGSKRPSYVDSDYEVFSETIFLK
CCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHH
NMVYQPTNERNAFFQLTKDEDDSFNPETPVILLNEPSDNDTKNPPLNQNESNNNTANNDT
HHHCCCCCCCCEEEEEECCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCC
KNPFLYKPKRKTKNPKLIEYSQQNFYPLKNGDIMMSKEGDQWLVEIKSKALKRFLKDQND
CCCEEECCCCCCCCCCEEEECCCCEEECCCCCEEEECCCCHHHHHHHHHHHHHHHHCCCC
KDRQIQTFTFNDTKTQIAQFKGKISSYVYTTNNSDLSLRPFYESFLLEKKSDDFYTIVDK
CCCEEEEEEECCHHHHHHHHHHHHHEEEEECCCCCEEEHHHHHHHHHHCCCCCHHHHHHH
ALDAIEISKCQMVLKKHSTDKLDSQHKAISIDLDFKKERFKSDTELFLECLKES
HHHHHHHHHHHHHHHHCCCHHCCCCCCEEEEEECCCHHHHCCHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA