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The map label for this gene is 108563131

Identifier: 108563131

GI number: 108563131

Start: 741785

End: 743638

Strand: Direct

Name: 108563131

Synonym: HPAG1_0706

Alternate gene names: NA

Gene position: 741785-743638 (Clockwise)

Preceding gene: 108563130

Following gene: 108563133

Centisome position: 46.47

GC content: 40.67

Gene sequence:

>1854_bases
TTGCACGCTGAAGACAACGGCTTTTTTGTGAGCGCGGGTTATCAAATCGGCGAAGCGGTGCAAATGGTGAAAAACACCGG
CGAATTGAAAAACTTGAACGACAAATACGAGCAATTAAGCCAATCTTTAGCCCAACTGGCTTCGTTAAAACGAAGCATTC
AAACGGCAAACAACATTCAGGCTGTCAACAATGCTTTAAGCGATTTAAAAAGCTTTGCGAGTAACAACCACACAAACAAA
GAAACATCGCCCATCTACAACACCGCGCAAGCTGTTATCACTTCAGTATTGGCTTTTTGGAGTCTTTATGCAGGGAACAC
TACCAGTTTTCATGTGACCGGTTTGAATGATGGATCTAATGCTCCTCTTGGAAGAATCCATAAAGATGGGAACTGCACAG
GATTACAACAATGTTTTATGGAACGAGAAATTTATAATAAGATGAAAAATCTTGCCGAAAGCCTCCAAAAAGCTCAAGGC
AATCTCTGTGCCTTATCAGAATGCTCTAACGATCAACCAAATGGAAACAAAACTTCCATGACTGCAGCTCTTCAAACCGC
GCAACAGCTTATGGATTTAATCGAACAGACCAAGGTTTCTATGGTGTGGAAAAATATCATCATCGCAGGTGTTACAAATA
GACCCGATGGTGCTGGCACTATCACATCCACTGGTCCTGTAACCGACTATGCGGTGTTTAACAACATCAAGGCGATGCTA
CCTATCTTGCAACAAGCGCTCAAATTAACTCAGGACAACCACACCCTATCCACTAACTTGCAAGATCGAGCTATGGGATC
TCAAACAAATCGTGAATTTGCTAAAGACATCTACGCTTTAGCTCAAAACCAAAAGCAAATCCTTTCTAACGCTTCAAGTA
TCTTCAATCTCTTTAATTCCATTCCTAAAGACCAACTTAAGTATTTGGAGAACGCTTACTTGAAAGTGCCACATTTGGGT
AAAACTCCTACTAACCCTTACAGACAGAATGTGAATTTGAATAAAGAAATTGATGCGGTTCAAAACAATGTAGCTAATTA
TGGCAATCGGATTGATTCGGCTTTAAGCGTGGCTAGAGATGTTTATAACCTAAAATCCAATCAAACAGAAATCGTAACCG
TCTATAACAACGCTAAGAATTTGAGCGAAGAGATTTCTAAACTCCCCTATAATAAGGTCAATGTAACAAACATCGTTATG
TCGCCTAAAGACAACTACCAAATCAACCCAGAGCAGCAATCCAATCTTAACCAAGCTTTAGCAGCGATGAGCAATAACCC
CTTTAAAAAAGTGGGCATGATCAGCTCTCAAAACAATAACGGCGCTTTGAATGGGCTTGGCGTGCAAGTGGGCTATAAGC
AATTCTTTGGCGAAAGCAAAAGATGGGGGTTAAGGTATTATGGCTTCTTTGATTACAACCACGGCTATATCAAATCCAGC
TTTTTTAATTCTTCTTCTGATATATGGACTTATGGCGGTGGGAGCGATTTGTTAGTGAATATTATCAACGATAGCATCAC
AAGAAAGAACAACAAGCTCTCCGTGGGTCTTTTTGGAGGCATCCAACTCGCAGGGACTACATGGCTTAATTCTCAATACG
TGAATTTAACCGCGTTCAATAACCCTTACAGCGCGAAAGTCAATACTTCCAATTTCCAATTCTTGTTCAATTTGGGTTTG
AGAACCAATCTCGCTACAGCTAGGAAAAAAGACAGCGAACATTCCGCGCAACATGGCATTGAACTGGGCATTAAAATCCC
CACCATTACCACGAATTACTATTCTTTTCTAGGCACTCAATTGCAATACAGAAGGCTCTATAGCGTGTATCTCAATTATG
TGTTCGCTTATTAA

Upstream 100 bases:

>100_bases
ATTTTCATTTCTATTCATGTTTACAATAAAAAAATTACTTTAAGGAACATTTTATGAAAAAACAATTTTTACTCTCTCTC
TCTCTCTCGCTTCATCGCTC

Downstream 100 bases:

>100_bases
AAGCTCTCTTTTTTAAGGGGGTTTAGAAAAATCGCAACATCAAGCTTTTATCATTGATGATGAAATCTACAAAACCAACG
GCGCGACAACAAACCCTAAC

Product: outer membrane protein SabB

Products: NA

Alternate protein names: Outer Membrane Protein HorA; Outer Membrane Protein HopQ; Outer Membrane Protein HopZ; Outer Membrane Protein HorE; Outer Membrane Protein(Omp4) HopW Protein SabB; Outer Membrane Protein/Porin; Outer Membrane Protein HopW Protein (; Outer Membrane Protein HorC; Outer Membrane Protein HorJ; Outer Membrane Protein SabB/HopO; Outer Membrane Protein,HopV SabB SabA; Outer Membrane Protein HopA; Outer Membrane Protein BabA; Outer Membrane Protein HopD; Outer Membrane Protein Adhesin; Outer Membrane Protein ,Adhesin BabA BabB; Outer Membrane Protein Omp; Outer Membrane Function; Outer Membrane Protein HorK; Outer Membrane Protein HorF; Outer Membrane Protein HopB; Adhesin; Outer Membrane Protein HopE; Outer Membrane Protein HorL; Outer Membrane Protein HopL; Outer Membrane Protein HopC; Outer Membrane Protein,HopV BabB BabA; Outer Membrane Protein HorB; Outer Membrane Protein HopF; Outer Membrane Protein HopG

Number of amino acids: Translated: 617; Mature: 617

Protein sequence:

>617_residues
MHAEDNGFFVSAGYQIGEAVQMVKNTGELKNLNDKYEQLSQSLAQLASLKRSIQTANNIQAVNNALSDLKSFASNNHTNK
ETSPIYNTAQAVITSVLAFWSLYAGNTTSFHVTGLNDGSNAPLGRIHKDGNCTGLQQCFMEREIYNKMKNLAESLQKAQG
NLCALSECSNDQPNGNKTSMTAALQTAQQLMDLIEQTKVSMVWKNIIIAGVTNRPDGAGTITSTGPVTDYAVFNNIKAML
PILQQALKLTQDNHTLSTNLQDRAMGSQTNREFAKDIYALAQNQKQILSNASSIFNLFNSIPKDQLKYLENAYLKVPHLG
KTPTNPYRQNVNLNKEIDAVQNNVANYGNRIDSALSVARDVYNLKSNQTEIVTVYNNAKNLSEEISKLPYNKVNVTNIVM
SPKDNYQINPEQQSNLNQALAAMSNNPFKKVGMISSQNNNGALNGLGVQVGYKQFFGESKRWGLRYYGFFDYNHGYIKSS
FFNSSSDIWTYGGGSDLLVNIINDSITRKNNKLSVGLFGGIQLAGTTWLNSQYVNLTAFNNPYSAKVNTSNFQFLFNLGL
RTNLATARKKDSEHSAQHGIELGIKIPTITTNYYSFLGTQLQYRRLYSVYLNYVFAY

Sequences:

>Translated_617_residues
MHAEDNGFFVSAGYQIGEAVQMVKNTGELKNLNDKYEQLSQSLAQLASLKRSIQTANNIQAVNNALSDLKSFASNNHTNK
ETSPIYNTAQAVITSVLAFWSLYAGNTTSFHVTGLNDGSNAPLGRIHKDGNCTGLQQCFMEREIYNKMKNLAESLQKAQG
NLCALSECSNDQPNGNKTSMTAALQTAQQLMDLIEQTKVSMVWKNIIIAGVTNRPDGAGTITSTGPVTDYAVFNNIKAML
PILQQALKLTQDNHTLSTNLQDRAMGSQTNREFAKDIYALAQNQKQILSNASSIFNLFNSIPKDQLKYLENAYLKVPHLG
KTPTNPYRQNVNLNKEIDAVQNNVANYGNRIDSALSVARDVYNLKSNQTEIVTVYNNAKNLSEEISKLPYNKVNVTNIVM
SPKDNYQINPEQQSNLNQALAAMSNNPFKKVGMISSQNNNGALNGLGVQVGYKQFFGESKRWGLRYYGFFDYNHGYIKSS
FFNSSSDIWTYGGGSDLLVNIINDSITRKNNKLSVGLFGGIQLAGTTWLNSQYVNLTAFNNPYSAKVNTSNFQFLFNLGL
RTNLATARKKDSEHSAQHGIELGIKIPTITTNYYSFLGTQLQYRRLYSVYLNYVFAY
>Mature_617_residues
MHAEDNGFFVSAGYQIGEAVQMVKNTGELKNLNDKYEQLSQSLAQLASLKRSIQTANNIQAVNNALSDLKSFASNNHTNK
ETSPIYNTAQAVITSVLAFWSLYAGNTTSFHVTGLNDGSNAPLGRIHKDGNCTGLQQCFMEREIYNKMKNLAESLQKAQG
NLCALSECSNDQPNGNKTSMTAALQTAQQLMDLIEQTKVSMVWKNIIIAGVTNRPDGAGTITSTGPVTDYAVFNNIKAML
PILQQALKLTQDNHTLSTNLQDRAMGSQTNREFAKDIYALAQNQKQILSNASSIFNLFNSIPKDQLKYLENAYLKVPHLG
KTPTNPYRQNVNLNKEIDAVQNNVANYGNRIDSALSVARDVYNLKSNQTEIVTVYNNAKNLSEEISKLPYNKVNVTNIVM
SPKDNYQINPEQQSNLNQALAAMSNNPFKKVGMISSQNNNGALNGLGVQVGYKQFFGESKRWGLRYYGFFDYNHGYIKSS
FFNSSSDIWTYGGGSDLLVNIINDSITRKNNKLSVGLFGGIQLAGTTWLNSQYVNLTAFNNPYSAKVNTSNFQFLFNLGL
RTNLATARKKDSEHSAQHGIELGIKIPTITTNYYSFLGTQLQYRRLYSVYLNYVFAY

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 68550; Mature: 68550

Theoretical pI: Translated: 9.48; Mature: 9.48

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHAEDNGFFVSAGYQIGEAVQMVKNTGELKNLNDKYEQLSQSLAQLASLKRSIQTANNIQ
CCCCCCCEEEECCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AVNNALSDLKSFASNNHTNKETSPIYNTAQAVITSVLAFWSLYAGNTTSFHVTGLNDGSN
HHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCC
APLGRIHKDGNCTGLQQCFMEREIYNKMKNLAESLQKAQGNLCALSECSNDQPNGNKTSM
CCCCCEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEHHCCCCCCCCCHHHH
TAALQTAQQLMDLIEQTKVSMVWKNIIIAGVTNRPDGAGTITSTGPVTDYAVFNNIKAML
HHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHH
PILQQALKLTQDNHTLSTNLQDRAMGSQTNREFAKDIYALAQNQKQILSNASSIFNLFNS
HHHHHHHHHHCCCCEEECCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IPKDQLKYLENAYLKVPHLGKTPTNPYRQNVNLNKEIDAVQNNVANYGNRIDSALSVARD
CCHHHHHHHHHHHEECCCCCCCCCCHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
VYNLKSNQTEIVTVYNNAKNLSEEISKLPYNKVNVTNIVMSPKDNYQINPEQQSNLNQAL
HHHCCCCCEEEEEEECCHHHHHHHHHHCCCCCEEEEEEEECCCCCCEECCHHHHHHHHHH
AAMSNNPFKKVGMISSQNNNGALNGLGVQVGYKQFFGESKRWGLRYYGFFDYNHGYIKSS
HHHCCCCCHHHCCEECCCCCCCCCCEEEEECHHHHCCCCCCCCEEEEEEEECCCCEEEHH
FFNSSSDIWTYGGGSDLLVNIINDSITRKNNKLSVGLFGGIQLAGTTWLNSQYVNLTAFN
CCCCCCCEEEECCCCHHHHHHHHHHHHCCCCEEEEEEECCEEEECEEEECCEEEEEEEEC
NPYSAKVNTSNFQFLFNLGLRTNLATARKKDSEHSAQHGIELGIKIPTITTNYYSFLGTQ
CCCCCEEECCCEEEEEECCCCCCHHHHHCCCCHHHHHCCCEEEEECCEEECHHHHHHHHH
LQYRRLYSVYLNYVFAY
HHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MHAEDNGFFVSAGYQIGEAVQMVKNTGELKNLNDKYEQLSQSLAQLASLKRSIQTANNIQ
CCCCCCCEEEECCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AVNNALSDLKSFASNNHTNKETSPIYNTAQAVITSVLAFWSLYAGNTTSFHVTGLNDGSN
HHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCC
APLGRIHKDGNCTGLQQCFMEREIYNKMKNLAESLQKAQGNLCALSECSNDQPNGNKTSM
CCCCCEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEHHCCCCCCCCCHHHH
TAALQTAQQLMDLIEQTKVSMVWKNIIIAGVTNRPDGAGTITSTGPVTDYAVFNNIKAML
HHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHH
PILQQALKLTQDNHTLSTNLQDRAMGSQTNREFAKDIYALAQNQKQILSNASSIFNLFNS
HHHHHHHHHHCCCCEEECCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IPKDQLKYLENAYLKVPHLGKTPTNPYRQNVNLNKEIDAVQNNVANYGNRIDSALSVARD
CCHHHHHHHHHHHEECCCCCCCCCCHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
VYNLKSNQTEIVTVYNNAKNLSEEISKLPYNKVNVTNIVMSPKDNYQINPEQQSNLNQAL
HHHCCCCCEEEEEEECCHHHHHHHHHHCCCCCEEEEEEEECCCCCCEECCHHHHHHHHHH
AAMSNNPFKKVGMISSQNNNGALNGLGVQVGYKQFFGESKRWGLRYYGFFDYNHGYIKSS
HHHCCCCCHHHCCEECCCCCCCCCCEEEEECHHHHCCCCCCCCEEEEEEEECCCCEEEHH
FFNSSSDIWTYGGGSDLLVNIINDSITRKNNKLSVGLFGGIQLAGTTWLNSQYVNLTAFN
CCCCCCCEEEECCCCHHHHHHHHHHHHCCCCEEEEEEECCEEEECEEEECCEEEEEEEEC
NPYSAKVNTSNFQFLFNLGLRTNLATARKKDSEHSAQHGIELGIKIPTITTNYYSFLGTQ
CCCCCEEECCCEEEEEECCCCCCHHHHHCCCCHHHHHCCCEEEEECCEEECHHHHHHHHH
LQYRRLYSVYLNYVFAY
HHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA