| Definition | Helicobacter pylori HPAG1 chromosome, complete genome. |
|---|---|
| Accession | NC_008086 |
| Length | 1,596,366 |
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The map label for this gene is acxB [H]
Identifier: 108563106
GI number: 108563106
Start: 715123
End: 717420
Strand: Direct
Name: acxB [H]
Synonym: HPAG1_0681
Alternate gene names: 108563106
Gene position: 715123-717420 (Clockwise)
Preceding gene: 108563105
Following gene: 108563107
Centisome position: 44.8
GC content: 43.91
Gene sequence:
>2298_bases ATGGCAAATTTATTGAAAAACGGCAAAACTTTAAAACAAGCTAGAGATGAAATCCTAGCCAGGACAGAAAAAACAGGGCA TTATAATGGTCTCAAAAAACTAGAGTTTAAAGAAAGAGATCCGATCGGTTATGAGAAAATGTTCTCTAAATTAAGAGGCG GTATCGTGCATGCCAGAGAAACGGCTAAAAGGATTGCGGCAAGCCCTATTGTTGAGCAAGAGGGAGAATTGTGCTTCACG CTTTATAACGCTGTGGGCGATAGCGTGCTGACTTCTACGGGTATCATTATCCATGTAGGCACTATGGGATCAGCCATCAA ATACATGGTAGAGAATAATTGGGAAGACAACCCAGGCATCAATGACAAGGATATTTTCACCAATAACGACTGCGCGATTG GGAATGTGCACCCATGCGATATTATGACTCTTGTGCCTATTTTCCACGATGAAAAATTGATTGGGTGGGTAGGCGGTGTT ACGCATGTGATTGATACCGGTTCGGTTACTCCAGGATCGATGAGCACTGGACAGGTTCAAAGATTTGGGGATGGATACAT GATCACTTGCCGTAAGACAGGAGCGAATGATGAAAGCTTTAAAGATTGGTTGCATGAATCTCAAAGATCGGTTCGCACGC CTAAATATTGGATTTTGGATGAAAGGACTAGGATTGCAGGATGCCATATGATTAGGGATTTAGTGATGGAAGTCATTAAA GAAGACGGCATTGATTCTTACATGCGATTTATTGATGAGGTGATTGAAGAAGGGAGGAGAGGCCTTATCTCTAGGATCAA ATCCATGACCATACCAGGCAAGTATAGAAAGGTAGCGTTTGTGGATGTGCCTTATGCGCATAAAGATATTGGCGTGTGCT CTGAATTTGCTAAGCTAGACACGATCATGCACTCTCCTGTGGAAATCACTATCAATAAAGACGCTACATGGAAATTAGAT TTTGATGGCGCGTCTAGGTGGGGATGGCACTCTTTCAATTGCAACCAAGTGTCTTTCACTAGCGGTATTTGGGTGATGAT GACTCAAACCTTAATACCCACTTCTCGCATCAATGATGGCGCTTATTTTGCGACTCAATTCAGACTCAAAAAAGGGACTT GGATGAATCCAGATGACAGGCGCACCGGGCATGCTTATGCGTGGCACTTCTTGGTATCAGGCTGGAGCGCTTTGTGGAGA GGCTTGTCTCAAGCGTATTACAGCCGAGGGTATTTAGAAGAGGTCAATTCTGGGAACGCTAACACTTCCAATTGGTTGCA AGGCGGTGGTATCAACCAAGATGGAGAAATCCATGCGGTGAATAGCTTTGAGACGAGTTCTTGTGGGACTGGAGCTTGCG CGATAAAAGACGGCTTGAATCACGCAGCGGCTATTTGGAACCCAGAAGGCGATATGGGCGATGTTGAAATTTGGGAAATG GCAGAGCCTCTTCTTTATCTAGGCAGGAATGTCAAGGCCAATACCGGTGGGTATGGGAAATATCGAGGCGGTAACGGGTT TGAAACCTTAAGAATGGTGTGGGGTGCGCATGATTGGACCATGTTCTTTATGGGTAATGGCTATATGAATAGCGATTGGG GTATGATGGGGGGCTATCCAGCGGCCAGTGGCTATAGGTTTGAAGCGCACAACACCGATTTAAAAAACAGGATTAAAAAT AACGCCAGCTTGCCTTTGGGGGGCGATTTTAACCCAACGGATAGAGATTATGAAAAGCACATTTCTCATGCGTCTCAAGT CAAAAGGGATAAGCAATGCATCACCACCGAGAACTGCTTTGACAATTATGATTTGTATTTGAATTACATCAAAGGCGGTC CTGGATTTGGCGATCCGATTGAAAGGGATTTGAATGCGATTTTAGAAGACTTAAACAGCAAACAGCTATTGCCAGAATAC GCTTACAAGGTTTATGGCGCGATTGTGAGCCAGAATAAAGACGGCGTGTGGGTCGGCGATGAAGCCAAAACGAAGGCCAG AAGAAAAGAAATTCTTGAAAACAGAAAGGCTAGATCCATACCGGTAAAACAATGGATGGAGCAAGAAAGAAACGCTATTC TTGAAAAAGAGGCTTCCAAACAAGTTAAGCACATGTATGCGACTAGCTTTGATCTCTCACCCAAGTTTTTAAGCGATTTT AAAACATTCTGGAACTTGCCAAAGAGCTGGAGCGTGAAAGAAGATGAGCTTGGCGTATTCACCTATGGATCTAAATACAG GATGGATTTGAGCAAATTGCCTGATGTGCGCACAGTTCTGTTGGTTGATGAGAAATAA
Upstream 100 bases:
>100_bases AATCAGATGCGACCACTTTCGTGATACCCAAGGGCTTTGCGACAAGACTAGACAAACACCGATTGTTCCACTTGAAAGAA GTTAAATAAAGGAGTTCAAA
Downstream 100 bases:
>100_bases AGAAAGGAGAATGGTCATGTCAAAATACACACAAGAACAAATTAAAAATTTGGTAGAGGGGAACTTGGATTGGAACACTG TCTTAAAAATGCTGAGCATG
Product: N-methylhydantoinase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 765; Mature: 764
Protein sequence:
>765_residues MANLLKNGKTLKQARDEILARTEKTGHYNGLKKLEFKERDPIGYEKMFSKLRGGIVHARETAKRIAASPIVEQEGELCFT LYNAVGDSVLTSTGIIIHVGTMGSAIKYMVENNWEDNPGINDKDIFTNNDCAIGNVHPCDIMTLVPIFHDEKLIGWVGGV THVIDTGSVTPGSMSTGQVQRFGDGYMITCRKTGANDESFKDWLHESQRSVRTPKYWILDERTRIAGCHMIRDLVMEVIK EDGIDSYMRFIDEVIEEGRRGLISRIKSMTIPGKYRKVAFVDVPYAHKDIGVCSEFAKLDTIMHSPVEITINKDATWKLD FDGASRWGWHSFNCNQVSFTSGIWVMMTQTLIPTSRINDGAYFATQFRLKKGTWMNPDDRRTGHAYAWHFLVSGWSALWR GLSQAYYSRGYLEEVNSGNANTSNWLQGGGINQDGEIHAVNSFETSSCGTGACAIKDGLNHAAAIWNPEGDMGDVEIWEM AEPLLYLGRNVKANTGGYGKYRGGNGFETLRMVWGAHDWTMFFMGNGYMNSDWGMMGGYPAASGYRFEAHNTDLKNRIKN NASLPLGGDFNPTDRDYEKHISHASQVKRDKQCITTENCFDNYDLYLNYIKGGPGFGDPIERDLNAILEDLNSKQLLPEY AYKVYGAIVSQNKDGVWVGDEAKTKARRKEILENRKARSIPVKQWMEQERNAILEKEASKQVKHMYATSFDLSPKFLSDF KTFWNLPKSWSVKEDELGVFTYGSKYRMDLSKLPDVRTVLLVDEK
Sequences:
>Translated_765_residues MANLLKNGKTLKQARDEILARTEKTGHYNGLKKLEFKERDPIGYEKMFSKLRGGIVHARETAKRIAASPIVEQEGELCFT LYNAVGDSVLTSTGIIIHVGTMGSAIKYMVENNWEDNPGINDKDIFTNNDCAIGNVHPCDIMTLVPIFHDEKLIGWVGGV THVIDTGSVTPGSMSTGQVQRFGDGYMITCRKTGANDESFKDWLHESQRSVRTPKYWILDERTRIAGCHMIRDLVMEVIK EDGIDSYMRFIDEVIEEGRRGLISRIKSMTIPGKYRKVAFVDVPYAHKDIGVCSEFAKLDTIMHSPVEITINKDATWKLD FDGASRWGWHSFNCNQVSFTSGIWVMMTQTLIPTSRINDGAYFATQFRLKKGTWMNPDDRRTGHAYAWHFLVSGWSALWR GLSQAYYSRGYLEEVNSGNANTSNWLQGGGINQDGEIHAVNSFETSSCGTGACAIKDGLNHAAAIWNPEGDMGDVEIWEM AEPLLYLGRNVKANTGGYGKYRGGNGFETLRMVWGAHDWTMFFMGNGYMNSDWGMMGGYPAASGYRFEAHNTDLKNRIKN NASLPLGGDFNPTDRDYEKHISHASQVKRDKQCITTENCFDNYDLYLNYIKGGPGFGDPIERDLNAILEDLNSKQLLPEY AYKVYGAIVSQNKDGVWVGDEAKTKARRKEILENRKARSIPVKQWMEQERNAILEKEASKQVKHMYATSFDLSPKFLSDF KTFWNLPKSWSVKEDELGVFTYGSKYRMDLSKLPDVRTVLLVDEK >Mature_764_residues ANLLKNGKTLKQARDEILARTEKTGHYNGLKKLEFKERDPIGYEKMFSKLRGGIVHARETAKRIAASPIVEQEGELCFTL YNAVGDSVLTSTGIIIHVGTMGSAIKYMVENNWEDNPGINDKDIFTNNDCAIGNVHPCDIMTLVPIFHDEKLIGWVGGVT HVIDTGSVTPGSMSTGQVQRFGDGYMITCRKTGANDESFKDWLHESQRSVRTPKYWILDERTRIAGCHMIRDLVMEVIKE DGIDSYMRFIDEVIEEGRRGLISRIKSMTIPGKYRKVAFVDVPYAHKDIGVCSEFAKLDTIMHSPVEITINKDATWKLDF DGASRWGWHSFNCNQVSFTSGIWVMMTQTLIPTSRINDGAYFATQFRLKKGTWMNPDDRRTGHAYAWHFLVSGWSALWRG LSQAYYSRGYLEEVNSGNANTSNWLQGGGINQDGEIHAVNSFETSSCGTGACAIKDGLNHAAAIWNPEGDMGDVEIWEMA EPLLYLGRNVKANTGGYGKYRGGNGFETLRMVWGAHDWTMFFMGNGYMNSDWGMMGGYPAASGYRFEAHNTDLKNRIKNN ASLPLGGDFNPTDRDYEKHISHASQVKRDKQCITTENCFDNYDLYLNYIKGGPGFGDPIERDLNAILEDLNSKQLLPEYA YKVYGAIVSQNKDGVWVGDEAKTKARRKEILENRKARSIPVKQWMEQERNAILEKEASKQVKHMYATSFDLSPKFLSDFK TFWNLPKSWSVKEDELGVFTYGSKYRMDLSKLPDVRTVLLVDEK
Specific function: Catalyzes the carboxylation of acetone to form acetoacetate. Has a reduced activity on butanone, and no activity on 2-pentatone, 3-pentatone, 2-hexanone, chloroacetone, pyruvate, phosphoenolpyruvate, acetaldehyde, propionaldehyde and propylene oxide [H]
COG id: COG0146
COG function: function code EQ; N-methylhydantoinase B/acetone carboxylase, alpha subunit
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the oxoprolinase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003692 [H]
Pfam domain/function: PF02538 Hydantoinase_B [H]
EC number: =6.4.1.6 [H]
Molecular weight: Translated: 86473; Mature: 86342
Theoretical pI: Translated: 6.95; Mature: 6.95
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MANLLKNGKTLKQARDEILARTEKTGHYNGLKKLEFKERDPIGYEKMFSKLRGGIVHARE CCCCHHCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCEEHHHH TAKRIAASPIVEQEGELCFTLYNAVGDSVLTSTGIIIHVGTMGSAIKYMVENNWEDNPGI HHHHHHHCCCHHCCCCEEEEHHHHHCCHHHHCCCEEEEECCCCHHHHHHHHCCCCCCCCC NDKDIFTNNDCAIGNVHPCDIMTLVPIFHDEKLIGWVGGVTHVIDTGSVTPGSMSTGQVQ CCCCCEECCCCCCCCCCCCCHHEEEHHHCCCHHHHHHCCHHHHEECCCCCCCCCCCCCHH RFGDGYMITCRKTGANDESFKDWLHESQRSVRTPKYWILDERTRIAGCHMIRDLVMEVIK CCCCCEEEEEECCCCCHHHHHHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHHHHHHHHH EDGIDSYMRFIDEVIEEGRRGLISRIKSMTIPGKYRKVAFVDVPYAHKDIGVCSEFAKLD HCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHH TIMHSPVEITINKDATWKLDFDGASRWGWHSFNCNQVSFTSGIWVMMTQTLIPTSRINDG HHHCCCEEEEECCCCEEEEECCCCCCCCCCCCCCCEEEECCCEEEEHHHHHCCCCCCCCC AYFATQFRLKKGTWMNPDDRRTGHAYAWHFLVSGWSALWRGLSQAYYSRGYLEEVNSGNA EEEEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCC NTSNWLQGGGINQDGEIHAVNSFETSSCGTGACAIKDGLNHAAAIWNPEGDMGDVEIWEM CCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCEEHHHCCCCCEEEECCCCCCCCCHHHHH AEPLLYLGRNVKANTGGYGKYRGGNGFETLRMVWGAHDWTMFFMGNGYMNSDWGMMGGYP HHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCEEEEEEECCEECCCCCCCCCCC AASGYRFEAHNTDLKNRIKNNASLPLGGDFNPTDRDYEKHISHASQVKRDKQCITTENCF CCCCEEEECCCCHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHCC DNYDLYLNYIKGGPGFGDPIERDLNAILEDLNSKQLLPEYAYKVYGAIVSQNKDGVWVGD CCCEEEEEEECCCCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCEEECC EAKTKARRKEILENRKARSIPVKQWMEQERNAILEKEASKQVKHMYATSFDLSPKFLSDF HHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHH KTFWNLPKSWSVKEDELGVFTYGSKYRMDLSKLPDVRTVLLVDEK HHHHCCCCCCCCCCCCCEEEECCCCEEECHHHCCCCEEEEEEECC >Mature Secondary Structure ANLLKNGKTLKQARDEILARTEKTGHYNGLKKLEFKERDPIGYEKMFSKLRGGIVHARE CCCHHCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCEEHHHH TAKRIAASPIVEQEGELCFTLYNAVGDSVLTSTGIIIHVGTMGSAIKYMVENNWEDNPGI HHHHHHHCCCHHCCCCEEEEHHHHHCCHHHHCCCEEEEECCCCHHHHHHHHCCCCCCCCC NDKDIFTNNDCAIGNVHPCDIMTLVPIFHDEKLIGWVGGVTHVIDTGSVTPGSMSTGQVQ CCCCCEECCCCCCCCCCCCCHHEEEHHHCCCHHHHHHCCHHHHEECCCCCCCCCCCCCHH RFGDGYMITCRKTGANDESFKDWLHESQRSVRTPKYWILDERTRIAGCHMIRDLVMEVIK CCCCCEEEEEECCCCCHHHHHHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHHHHHHHHH EDGIDSYMRFIDEVIEEGRRGLISRIKSMTIPGKYRKVAFVDVPYAHKDIGVCSEFAKLD HCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHH TIMHSPVEITINKDATWKLDFDGASRWGWHSFNCNQVSFTSGIWVMMTQTLIPTSRINDG HHHCCCEEEEECCCCEEEEECCCCCCCCCCCCCCCEEEECCCEEEEHHHHHCCCCCCCCC AYFATQFRLKKGTWMNPDDRRTGHAYAWHFLVSGWSALWRGLSQAYYSRGYLEEVNSGNA EEEEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCC NTSNWLQGGGINQDGEIHAVNSFETSSCGTGACAIKDGLNHAAAIWNPEGDMGDVEIWEM CCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCEEHHHCCCCCEEEECCCCCCCCCHHHHH AEPLLYLGRNVKANTGGYGKYRGGNGFETLRMVWGAHDWTMFFMGNGYMNSDWGMMGGYP HHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCEEEEEEECCEECCCCCCCCCCC AASGYRFEAHNTDLKNRIKNNASLPLGGDFNPTDRDYEKHISHASQVKRDKQCITTENCF CCCCEEEECCCCHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHCC DNYDLYLNYIKGGPGFGDPIERDLNAILEDLNSKQLLPEYAYKVYGAIVSQNKDGVWVGD CCCEEEEEEECCCCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCEEECC EAKTKARRKEILENRKARSIPVKQWMEQERNAILEKEASKQVKHMYATSFDLSPKFLSDF HHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHH KTFWNLPKSWSVKEDELGVFTYGSKYRMDLSKLPDVRTVLLVDEK HHHHCCCCCCCCCCCCCEEEECCCCEEECHHHCCCCEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 12003937 [H]