Definition Helicobacter pylori HPAG1 chromosome, complete genome.
Accession NC_008086
Length 1,596,366

Click here to switch to the map view.

The map label for this gene is acxC [H]

Identifier: 108563107

GI number: 108563107

Start: 717431

End: 717937

Strand: Direct

Name: acxC [H]

Synonym: HPAG1_0682

Alternate gene names: 108563107

Gene position: 717431-717937 (Clockwise)

Preceding gene: 108563106

Following gene: 108563108

Centisome position: 44.94

GC content: 41.81

Gene sequence:

>507_bases
ATGGTCATGTCAAAATACACACAAGAACAAATTAAAAATTTGGTAGAGGGGAACTTGGATTGGAACACTGTCTTAAAAAT
GCTGAGCATGCCTAAAGATCATGAAAGGTTTCAAATGTATTTGAAGGTGTTGCAAGATAAGGTAGATTTTGATGACAAAA
TCGTCTTACCCTTGGGGCCGCATTTGTTTGTGGTGCAAGATTCTCAAAAAAAGTGGGTGATTAAGTGTTCATGCGGCCAT
GCGTTTTGCGCTCCAGAGGAGAACTGGAAATTGCATGCAAACATCTATGTGCGCGATACAGCAGAAAAAATGGAAGAGGT
GTATCCTAAACTCTTAGCCAGTGATACTCACTGGCAAGTGTATCGGGAGTATATTTGCCCGGATTGCGGCATCCTTTTAG
ATGTTGAAGCCCCAACTCCTTGGTATCCTGTGATCCATGATTTTGAGCCTGATATAGAGGTGTTTTATAAAGATTGGCTA
GGCATACAGCCCCCAGAAAGACGCTAA

Upstream 100 bases:

>100_bases
CTTGGCGTATTCACCTATGGATCTAAATACAGGATGGATTTGAGCAAATTGCCTGATGTGCGCACAGTTCTGTTGGTTGA
TGAGAAATAAAGAAAGGAGA

Downstream 100 bases:

>100_bases
AATCGCTCAATCCTTTTTATGAAGAGGCTTTATGCCTCTTTGACGCATTAAAAAGCTTGGGTTAATTCAACTCAAGCAAA
TTCTTTCAATCCTAACAAAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 168; Mature: 168

Protein sequence:

>168_residues
MVMSKYTQEQIKNLVEGNLDWNTVLKMLSMPKDHERFQMYLKVLQDKVDFDDKIVLPLGPHLFVVQDSQKKWVIKCSCGH
AFCAPEENWKLHANIYVRDTAEKMEEVYPKLLASDTHWQVYREYICPDCGILLDVEAPTPWYPVIHDFEPDIEVFYKDWL
GIQPPERR

Sequences:

>Translated_168_residues
MVMSKYTQEQIKNLVEGNLDWNTVLKMLSMPKDHERFQMYLKVLQDKVDFDDKIVLPLGPHLFVVQDSQKKWVIKCSCGH
AFCAPEENWKLHANIYVRDTAEKMEEVYPKLLASDTHWQVYREYICPDCGILLDVEAPTPWYPVIHDFEPDIEVFYKDWL
GIQPPERR
>Mature_168_residues
MVMSKYTQEQIKNLVEGNLDWNTVLKMLSMPKDHERFQMYLKVLQDKVDFDDKIVLPLGPHLFVVQDSQKKWVIKCSCGH
AFCAPEENWKLHANIYVRDTAEKMEEVYPKLLASDTHWQVYREYICPDCGILLDVEAPTPWYPVIHDFEPDIEVFYKDWL
GIQPPERR

Specific function: Catalyzes the carboxylation of acetone to form acetoacetate. Has a reduced activity on butanone, and no activity on 2-pentatone, 3-pentatone, 2-hexanone, chloroacetone, pyruvate, phosphoenolpyruvate, acetaldehyde, propionaldehyde and propylene oxide [H]

COG id: COG4647

COG function: function code Q; Acetone carboxylase, gamma subunit

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016750
- InterPro:   IPR014979 [H]

Pfam domain/function: PF08882 Acetone_carb_G [H]

EC number: =6.4.1.6 [H]

Molecular weight: Translated: 19931; Mature: 19931

Theoretical pI: Translated: 5.06; Mature: 5.06

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.0 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
6.5 %Cys+Met (Translated Protein)
3.0 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
6.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVMSKYTQEQIKNLVEGNLDWNTVLKMLSMPKDHERFQMYLKVLQDKVDFDDKIVLPLGP
CCCCHHHHHHHHHHHCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCEEEEECCC
HLFVVQDSQKKWVIKCSCGHAFCAPEENWKLHANIYVRDTAEKMEEVYPKLLASDTHWQV
EEEEEECCCCEEEEEEECCCEECCCCCCCEEEEEEEEECHHHHHHHHHHHHHCCCCHHHH
YREYICPDCGILLDVEAPTPWYPVIHDFEPDIEVFYKDWLGIQPPERR
HHHHHCCCCCEEEEECCCCCCCCCEECCCCCHHHHHHHHCCCCCCCCC
>Mature Secondary Structure
MVMSKYTQEQIKNLVEGNLDWNTVLKMLSMPKDHERFQMYLKVLQDKVDFDDKIVLPLGP
CCCCHHHHHHHHHHHCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCEEEEECCC
HLFVVQDSQKKWVIKCSCGHAFCAPEENWKLHANIYVRDTAEKMEEVYPKLLASDTHWQV
EEEEEECCCCEEEEEEECCCEECCCCCCCEEEEEEEEECHHHHHHHHHHHHHCCCCHHHH
YREYICPDCGILLDVEAPTPWYPVIHDFEPDIEVFYKDWLGIQPPERR
HHHHHCCCCCEEEEECCCCCCCCCEECCCCCHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12003937 [H]