Click here to switch to the map view.

The map label for this gene is glpC [C]

Identifier: 108563076

GI number: 108563076

Start: 678304

End: 679605

Strand: Direct

Name: glpC [C]

Synonym: HPAG1_0651

Alternate gene names: 108563076

Gene position: 678304-679605 (Clockwise)

Preceding gene: 108563075

Following gene: 108563077

Centisome position: 42.49

GC content: 39.71

Gene sequence:

>1302_bases
ATGAATGAAAATGTTAATGGAAATATTTTTGAAGAAGTAGGGGACGCTTGCGTTAAATGCGCTAAATGCGTGCCAGGTTG
CACGATATATCGCATTCATAAGGACGAGGCGACTTCGCCTAGAGGCTTTTTAGATTTGATGCGCCTAAACGCTCAAAACA
AGCTCCAATTAGACGCAAATTTAAAACACCTTTTAGAAACTTGCTTTTTATGCACCGCTTGCGTGGAAACTTGCCCCTTT
CATTTGCCCATAGACACTTTAATAGAAAAAGCCAGAGAAAAAATCGCTCAAAAGCACGGCATCGCTTGGTATAAAAAATC
CTATTTTTCCCTTTTAAAAAACCGCAAAAAAATGGATAGGGTGTTTTCGGTGGCGCATTTTTTAGCCCCTTGTATCTTCA
AGCAAGTGGGGGATAGTTTAGAGCCTAGGGCGGTGTTTAAAGGCTTATTCAAACGCTTTAAAAAAAGCGCACTCCCTCCT
TTAAATCAAAAAAGTTTTTTACAAAAACATGCAGAAATGAAGCCTTTAGAAAACCCCATTCAAAAAGTGGCCATTTTTAT
AGGGTGCTTGAGCAATTACCATTACCAGCAAGTGGGGGAAAGCTTGTTGTATATTTTAGAAAAACTCAACGTTCAAGCGA
TCATCCCTAAGCAAGAATGCTGCTCAGCCCCTGCGTATTTTACCGGCGATAAAGACACCACGCTTTTTTTAGTGAAAAAA
AACATAGAATGTTTTGAAAGCTATTTAGATGAAGTGGATGCGATCATCGTGCCTGAAGCCACATGTGCTAGCATGCTCAT
CAACGATTATTACAAGGTGTTTTTAGGCGAAAAAGATAAGGATTTGTATGTGAAACGCTTGGAAAAAATCACGCCTAAAA
TCTATCTGGCGAGCGTGTTTTTAGAGAAACACACCCCTTTAAAAAGTCTTTTAGAAAAAATCCCTAAGGGAAAAAAAGAG
GCTATCACTTATCATAACCCTTGCCATGCCAAAAAAACCCTAAACGCTCACAAAGAAGTGCGCAGCTTGCTCAATTCGCA
TTATGAAATTAAAGAAATGCCAGACAATTGTTGCGGTTTTGGGGGGATTACGATGCAAACCGAAAAGGCGGAGTTTTCTC
TAAAAGTAGGGCTTCTTAGGGCTAAAGAAATCATAGACACCAAAGCTAGAATTTTGAGCGCAGAATGTGGGGCATGCCAC
ATGCAATTAAATAACGCTTTAAAGTCTTTAGATGACCCTAACACCCCGCCATTTTCACACCCTTTAGAACTCATCGCTAA
AGCCTTAAAAAGCACTGAATAA

Upstream 100 bases:

>100_bases
GCTTTGAGATGACTAGAACAGGGGGCATGCTCGTAAGAAACATGGCCATGGAGTTTGACGCGTATTTGCGTGGGGGCGAA
AAACATTTCAGTAAAACGCT

Downstream 100 bases:

>100_bases
AAAGCCTTTTTAACCCCACTTTCCAACATCTTTTTATATAATACAGAGCTTTAACACCGCTATAAGGAATGAAAAATGCA
AGAAATCAGCGCCTATAAAC

Product: glycerol-3-phosphate dehydrogenase

Products: FADH2; dihydroxy-acetone-phosphate [C]

Alternate protein names: NA

Number of amino acids: Translated: 433; Mature: 433

Protein sequence:

>433_residues
MNENVNGNIFEEVGDACVKCAKCVPGCTIYRIHKDEATSPRGFLDLMRLNAQNKLQLDANLKHLLETCFLCTACVETCPF
HLPIDTLIEKAREKIAQKHGIAWYKKSYFSLLKNRKKMDRVFSVAHFLAPCIFKQVGDSLEPRAVFKGLFKRFKKSALPP
LNQKSFLQKHAEMKPLENPIQKVAIFIGCLSNYHYQQVGESLLYILEKLNVQAIIPKQECCSAPAYFTGDKDTTLFLVKK
NIECFESYLDEVDAIIVPEATCASMLINDYYKVFLGEKDKDLYVKRLEKITPKIYLASVFLEKHTPLKSLLEKIPKGKKE
AITYHNPCHAKKTLNAHKEVRSLLNSHYEIKEMPDNCCGFGGITMQTEKAEFSLKVGLLRAKEIIDTKARILSAECGACH
MQLNNALKSLDDPNTPPFSHPLELIAKALKSTE

Sequences:

>Translated_433_residues
MNENVNGNIFEEVGDACVKCAKCVPGCTIYRIHKDEATSPRGFLDLMRLNAQNKLQLDANLKHLLETCFLCTACVETCPF
HLPIDTLIEKAREKIAQKHGIAWYKKSYFSLLKNRKKMDRVFSVAHFLAPCIFKQVGDSLEPRAVFKGLFKRFKKSALPP
LNQKSFLQKHAEMKPLENPIQKVAIFIGCLSNYHYQQVGESLLYILEKLNVQAIIPKQECCSAPAYFTGDKDTTLFLVKK
NIECFESYLDEVDAIIVPEATCASMLINDYYKVFLGEKDKDLYVKRLEKITPKIYLASVFLEKHTPLKSLLEKIPKGKKE
AITYHNPCHAKKTLNAHKEVRSLLNSHYEIKEMPDNCCGFGGITMQTEKAEFSLKVGLLRAKEIIDTKARILSAECGACH
MQLNNALKSLDDPNTPPFSHPLELIAKALKSTE
>Mature_433_residues
MNENVNGNIFEEVGDACVKCAKCVPGCTIYRIHKDEATSPRGFLDLMRLNAQNKLQLDANLKHLLETCFLCTACVETCPF
HLPIDTLIEKAREKIAQKHGIAWYKKSYFSLLKNRKKMDRVFSVAHFLAPCIFKQVGDSLEPRAVFKGLFKRFKKSALPP
LNQKSFLQKHAEMKPLENPIQKVAIFIGCLSNYHYQQVGESLLYILEKLNVQAIIPKQECCSAPAYFTGDKDTTLFLVKK
NIECFESYLDEVDAIIVPEATCASMLINDYYKVFLGEKDKDLYVKRLEKITPKIYLASVFLEKHTPLKSLLEKIPKGKKE
AITYHNPCHAKKTLNAHKEVRSLLNSHYEIKEMPDNCCGFGGITMQTEKAEFSLKVGLLRAKEIIDTKARILSAECGACH
MQLNNALKSLDDPNTPPFSHPLELIAKALKSTE

Specific function: Electron Transfer Protein; May Also Function As The Membrane Anchor For The Glpab Dimer. [C]

COG id: COG0247

COG function: function code C; Fe-S oxidoreductase

Gene ontology:

Cell location: Loosely Bound To The Cytoplasm Membrane [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 4Fe-4S ferredoxin-type domains [H]

Homologues:

Organism=Escherichia coli, GI1788576, Length=442, Percent_Identity=23.7556561085973, Blast_Score=95, Evalue=1e-20,
Organism=Escherichia coli, GI48994913, Length=373, Percent_Identity=22.5201072386059, Blast_Score=79, Evalue=7e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006058
- InterPro:   IPR017896
- InterPro:   IPR017900
- InterPro:   IPR012675
- InterPro:   IPR004017
- InterPro:   IPR001041
- InterPro:   IPR012285
- InterPro:   IPR009051
- InterPro:   IPR004489 [H]

Pfam domain/function: PF02754 CCG; PF00111 Fer2 [H]

EC number: NA

Molecular weight: Translated: 49068; Mature: 49068

Theoretical pI: Translated: 8.62; Mature: 8.62

Prosite motif: PS00198 4FE4S_FERREDOXIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.4 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
6.2 %Cys+Met (Translated Protein)
4.4 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
6.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNENVNGNIFEEVGDACVKCAKCVPGCTIYRIHKDEATSPRGFLDLMRLNAQNKLQLDAN
CCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCHHHHHHHHHCCCCCEEECHH
LKHLLETCFLCTACVETCPFHLPIDTLIEKAREKIAQKHGIAWYKKSYFSLLKNRKKMDR
HHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH
VFSVAHFLAPCIFKQVGDSLEPRAVFKGLFKRFKKSALPPLNQKSFLQKHAEMKPLENPI
HHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCHHHHHH
QKVAIFIGCLSNYHYQQVGESLLYILEKLNVQAIIPKQECCSAPAYFTGDKDTTLFLVKK
HHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCEEECCHHHHCCCCCEEECCCCCEEEEEEC
NIECFESYLDEVDAIIVPEATCASMLINDYYKVFLGEKDKDLYVKRLEKITPKIYLASVF
CHHHHHHHHHHHCEEECCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCHHHHHHHHH
LEKHTPLKSLLEKIPKGKKEAITYHNPCHAKKTLNAHKEVRSLLNSHYEIKEMPDNCCGF
HHHCCCHHHHHHHCCCCCHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHCCCCHHCCC
GGITMQTEKAEFSLKVGLLRAKEIIDTKARILSAECGACHMQLNNALKSLDDPNTPPFSH
CCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCC
PLELIAKALKSTE
HHHHHHHHHHCCC
>Mature Secondary Structure
MNENVNGNIFEEVGDACVKCAKCVPGCTIYRIHKDEATSPRGFLDLMRLNAQNKLQLDAN
CCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCHHHHHHHHHCCCCCEEECHH
LKHLLETCFLCTACVETCPFHLPIDTLIEKAREKIAQKHGIAWYKKSYFSLLKNRKKMDR
HHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH
VFSVAHFLAPCIFKQVGDSLEPRAVFKGLFKRFKKSALPPLNQKSFLQKHAEMKPLENPI
HHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCHHHHHH
QKVAIFIGCLSNYHYQQVGESLLYILEKLNVQAIIPKQECCSAPAYFTGDKDTTLFLVKK
HHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCEEECCHHHHCCCCCEEECCCCCEEEEEEC
NIECFESYLDEVDAIIVPEATCASMLINDYYKVFLGEKDKDLYVKRLEKITPKIYLASVF
CHHHHHHHHHHHCEEECCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCHHHHHHHHH
LEKHTPLKSLLEKIPKGKKEAITYHNPCHAKKTLNAHKEVRSLLNSHYEIKEMPDNCCGF
HHHCCCHHHHHHHCCCCCHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHCCCCHHCCC
GGITMQTEKAEFSLKVGLLRAKEIIDTKARILSAECGACHMQLNNALKSLDDPNTPPFSH
CCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCC
PLELIAKALKSTE
HHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: Fe [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: FAD; glycerol-3-phosphate [C]

Specific reaction: FAD + glycerol-3-phosphate = FADH2 + dihydroxy-acetone-phosphate [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA