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The map label for this gene is 108563077

Identifier: 108563077

GI number: 108563077

Start: 679681

End: 680334

Strand: Direct

Name: 108563077

Synonym: HPAG1_0652

Alternate gene names: NA

Gene position: 679681-680334 (Clockwise)

Preceding gene: 108563076

Following gene: 108563078

Centisome position: 42.58

GC content: 40.67

Gene sequence:

>654_bases
ATGCAAGAAATCAGCGCCTATAAACTCATCAAAGAAAAATTGCAAGCCATACCCAACCAGCGCCATAAAGGGAGCTTGTT
TGAAAAAATTTCTAAGCAATTTTTACAAGAGCATGACAGCGCTAACGAATACGAGTCTATTAAGCTTTGGAACGATTGGG
AATTAAGGGGGAAGGAGCGCGATAGGGGGATTGATATAGTCATTCAAACGACTTCAAAAGAATACATCGCCGTGCAATGC
AAATTCCATCAAAATAGCATCTCGCTTAACGACATTTCAACTTTTTTAACCCAATTGCAAAGCGGGGTGGGGGAGGTCAG
GTTTAAAAAAGGGATTATCATCTCCACTTCTAATTTAACCTCTGAAGCCCTTAAAGCAATTGAGCAAATCAGAAGCGCAG
GAATGGGGATTGATATTGATGAAATCACTGAAGAGGATTTTATTTATTCTCGTATTGATTGGGAAAAGCTTGATCCCACT
CAAACGCAAGACGAACTCCCCTTGTGCGATAAGAAAAAGCCACGCTCGCATCAAATAGAAGCGATAAACGCCACCAAAGA
GTATTTTTCTAGCCCTAAAAATACTAGAGGCAAGCTCATTATGGCATGCGGGACAGGCAAAACCTACACTTCTTTAAAAA
TCATGGAGCTTTAG

Upstream 100 bases:

>100_bases
TAAAGCCTTAAAAAGCACTGAATAAAAAGCCTTTTTAACCCCACTTTCCAACATCTTTTTATATAATACAGAGCTTTAAC
ACCGCTATAAGGAATGAAAA

Downstream 100 bases:

>100_bases
ACCCTAAGATCACGCTTTTTTTAGCGCCAAGCATCGCTTTGCTTTCTCAAACTTTTAGAGAATACGCAAAAGAAAAAAGC
GAGCCTTTTTACGCTTCTAT

Product: hypothetical protein

Products: NA

Alternate protein names: Helicase; Type III Restriction Protein Res Subunit; Type III Restriction Res Subunit; Adenine Specific DNA Methyltransferase; Superfamily II DNA/RNA Helicase; Helicase Domain Protein; Helicase Domain-Containing Protein; II DNA/RNA Helicase; Endonuclease And Methylase LlaGI; Restriction- System LlaBIII; Restriction/; DEAD/DEAH Box Helicase-Like

Number of amino acids: Translated: 217; Mature: 217

Protein sequence:

>217_residues
MQEISAYKLIKEKLQAIPNQRHKGSLFEKISKQFLQEHDSANEYESIKLWNDWELRGKERDRGIDIVIQTTSKEYIAVQC
KFHQNSISLNDISTFLTQLQSGVGEVRFKKGIIISTSNLTSEALKAIEQIRSAGMGIDIDEITEEDFIYSRIDWEKLDPT
QTQDELPLCDKKKPRSHQIEAINATKEYFSSPKNTRGKLIMACGTGKTYTSLKIMEL

Sequences:

>Translated_217_residues
MQEISAYKLIKEKLQAIPNQRHKGSLFEKISKQFLQEHDSANEYESIKLWNDWELRGKERDRGIDIVIQTTSKEYIAVQC
KFHQNSISLNDISTFLTQLQSGVGEVRFKKGIIISTSNLTSEALKAIEQIRSAGMGIDIDEITEEDFIYSRIDWEKLDPT
QTQDELPLCDKKKPRSHQIEAINATKEYFSSPKNTRGKLIMACGTGKTYTSLKIMEL
>Mature_217_residues
MQEISAYKLIKEKLQAIPNQRHKGSLFEKISKQFLQEHDSANEYESIKLWNDWELRGKERDRGIDIVIQTTSKEYIAVQC
KFHQNSISLNDISTFLTQLQSGVGEVRFKKGIIISTSNLTSEALKAIEQIRSAGMGIDIDEITEEDFIYSRIDWEKLDPT
QTQDELPLCDKKKPRSHQIEAINATKEYFSSPKNTRGKLIMACGTGKTYTSLKIMEL

Specific function: Unknown

COG id: COG4889

COG function: function code R; Predicted helicase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24908; Mature: 24908

Theoretical pI: Translated: 6.94; Mature: 6.94

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQEISAYKLIKEKLQAIPNQRHKGSLFEKISKQFLQEHDSANEYESIKLWNDWELRGKER
CCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCC
DRGIDIVIQTTSKEYIAVQCKFHQNSISLNDISTFLTQLQSGVGEVRFKKGIIISTSNLT
CCCEEEEEEECCCCEEEEEEEECCCCCCHHHHHHHHHHHHHCCCCEEEECCEEEEECCCC
SEALKAIEQIRSAGMGIDIDEITEEDFIYSRIDWEKLDPTQTQDELPLCDKKKPRSHQIE
HHHHHHHHHHHHCCCCCCHHHHCCCHHEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCEE
AINATKEYFSSPKNTRGKLIMACGTGKTYTSLKIMEL
EEHHHHHHHCCCCCCCCCEEEEECCCCCEEEEEEEEC
>Mature Secondary Structure
MQEISAYKLIKEKLQAIPNQRHKGSLFEKISKQFLQEHDSANEYESIKLWNDWELRGKER
CCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCC
DRGIDIVIQTTSKEYIAVQCKFHQNSISLNDISTFLTQLQSGVGEVRFKKGIIISTSNLT
CCCEEEEEEECCCCEEEEEEEECCCCCCHHHHHHHHHHHHHCCCCEEEECCEEEEECCCC
SEALKAIEQIRSAGMGIDIDEITEEDFIYSRIDWEKLDPTQTQDELPLCDKKKPRSHQIE
HHHHHHHHHHHHCCCCCCHHHHCCCHHEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCEE
AINATKEYFSSPKNTRGKLIMACGTGKTYTSLKIMEL
EEHHHHHHHCCCCCCCCCEEEEECCCCCEEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA