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The map label for this gene is omp85 [H]

Identifier: 108563065

GI number: 108563065

Start: 665326

End: 668076

Strand: Direct

Name: omp85 [H]

Synonym: HPAG1_0640

Alternate gene names: 108563065

Gene position: 665326-668076 (Clockwise)

Preceding gene: 108563064

Following gene: 108563066

Centisome position: 41.68

GC content: 42.78

Gene sequence:

>2751_bases
ATTAAAAAATTAATTCTATCCTCTCTTGTTTTCGCATGTATCAATACCAGCGTTGAAGCTTTAGAAAATGACGGCTCTAA
ACCAAACGATTTGACTCCACCAAAAGAAGCCTCTCAAGAAGCTCAAAGAAATGAGGCTCCAAAAAATGAAGTTCAAAGAA
ATGAGGCTCAAAAAGAAACCCCCCAATCCAATCAAACGCCTAAAGAAATGAAAGTCAAGTCCATTTCTTATGTCGGGCTT
TCTTACATGTCTGACATGCTCGCTAATGAGATTGTAAAGATTCGTGTGGGCGATATGGTGGATTCTAAAAAAATAGACAC
CGCTGTTTTGGCTTTGTTCAATCAAGGGTATTTTAAAGACGTTTATGCCACTTTTGAAGGCGGCATATTAGAGTTTCATT
TTGATGAAAAAGCCAGGATTGCCGGGGTAGAAATCAAGGGTTATGGGACTGAAAAGGAAAAAGACGGCTTAAAATCCCAA
ATGGGGATCAAAAAGGGCGACACCTTTGATGAGCAAAAATTAGAGCATGCTAAAACGGCTTTAAAAACCGCTTTAGAGGG
GCAGGGCTATTATGGGAGCGTGGTGGAGGTGCGCACAGAAAAGGTCAGTGAGGGCGCATTATTAATCGTGTTTGATGTGA
ATAGGGGGGATAGCATTTATATCAAACAATCCATTTATGAGGGAAGCGCGAAATTAAAACGCCGCATGATTGAATCTTTG
AGCGCGAACAAACAAAGAGATTTCATGGGCTGGATGTGGGGCTTGAATGATGGGAAATTGCGTTTAGATCAATTAGAATA
CGATTCTATGCGTATCCAAGATGTGTATATGCGTAGGGGTTACTTAGACGCTCATATTTCTTCGCCTTTTTTGAAAACGG
ATTTTTCTACCCATGACGCTAAGCTCCATTATAAAGTCAAAGAGGGGATCCAATACAGGATTTCAGACATTTTAATAGAG
ATTGACAACCCGGTAGTCCCCTTAAAAACCTTAGAAAAAGCGCTTAAAGTTAAAAGAAAAGATGTCTTTAATATTGAGCA
TTTGAGAGCGGATGCGCAAATTTTAAAAACCGAAATCGCTGATAAGGGTTATGCGTTTGCGGTGGTGAAGCCAGACTTGG
ATAAGGACGAAAAAAACGGGCTTGTGAAAGTCATTTATCGTATTGAAGTGGGCGATATGGTGTATATCAATGATGTCATC
ATTTCAGGGAACCAACGCACGAGCGATCGAATCATTAGGAGGGAGTTATTGTTAGGGCCTAAGGATAAATACAACTTGAC
CAAACTGAGAAATTCCGAAAATTCTTTAAGGCGTTTAGGGTTTTTCTCTAAAGTCAAAATTGAAGAAAAAAGGGTGAATA
GCTCGCTTATGGATTTATTAGTGAGCGTAGAAGAGGGGCGCACCGGGCAGTTGCAATTTGGGTTAGGCTATGGCTCTTAT
GGAGGGCTTATGCTTAATGGGAGCGTGAGCGAAAGAAACCTTTTTGGCACAGGCCAAAGCATGAGCTTGTATGCTAATAT
TGCTACAGGGGGGGGCAGATCTTATCCTGGCATGCCAAGAGGAGCGGGGCGTATGTTTGCCGGGAATTTGAGCTTGACTA
ATCCAAGGATTTTTGACAGCTGGTATAGCTCTACGATCAATCTTTATGCGGATTACAGGATAAGCTATCAATACATCCAA
CAAGGCGGAGGCTTTGGGGTGAATGTCGGGCGCATGCTGGGTAACAGAACCCATGTGAGCTTAGGGTATAACTTGAACGT
TACCAAGCTCCTTGGTTTCAGCAGCCCTTTATACAACCGCTACTATTCCTCTGTTAATGAAGTGGTCTCTCCAAGGCAAT
GTTCCACCCCCGCATCGGTGATTATCAATCGCTTATCAGGCGGTAAAACTCCATTGGTCCCTGAAAGCTGTTCTAGTCCT
GGAGCGATCACCACTTCACCAGAAATAAAAGGTATTTGGGATAGGGATTACCATACGCCTATCACCAGCTCTTTCACTCT
TGATGTGAGCTATGACAACACTGATGATTATTATTTCCCTAGAAATGGGGTTATCTTTAGCTCTTATGCGACGATGTCTG
GTTTGCCAAGCTCTGGCACGCTCAATTCTTGGAACGGGTTAGGCGGGAATGTCCGTAACACTAAAGTTTATGGTAAATTC
GCCGCTTACCACCATTTGCAAAAATATTTATTGATAGATTTGATCGCTCGCTTTAAAACGCAAGGGGGCTATATCTTTAG
GTATAACACCGATGATTACTTGCCCTTAAACTCCACTTTCTACATGGGGGGCGTAACCACGGTGAGAGGCTTTAGGAACG
GATCGGTTACGCCTAAAGATGAGTTTGGCTTGTGGCTTGGAGGCGATGGGATTTTTACCGCTTCTACTGAATTGAGCTAT
GGGGTGCTAAAAGCGGCTAAAATGCGTTTAGCGTGGTTTTTTGACTTTGGTTTCTTAACCTTTAAAACCCCAACTAGGGG
GAGTTTCTTCTATAACGCTCCCGTTACGACGGCGAATTTTAAAGATTATGGCGTTATAGGGTCTGGGTTTGAAAGAGCGA
CTTGGAGAGCTTCTACAGGCTTGCAGATTGAATGGATTTCGCCCATGGGGCCTTTGGTGTTGATTTTCCCTATAGCGTTT
TTCAACCAATGGGGCGATGGCAATGGCAAGAAATGCAAAGGGCTATGCTTCAACCCTAACATGGACGATTACACGCAACA
CTTTGAATTTTCTATGGGAACAAGGTTTTAA

Upstream 100 bases:

>100_bases
TTTATACAGAAATTTTAATAATTTTTAGCGTTTTTAAGAATGATTAGTTATAATAACGCTACTAACAACACTCAAGCTAA
AATCTATTAAGGAAATCAGT

Downstream 100 bases:

>100_bases
AATGTGCATTAACAGAGAAGAAATTTTGGATTTAATGAAAAACGCGCCCTTGAAAGAATTAGGGCAAAAGGCTTTGAGAG
TGAAGCAACGCTTGCACCCT

Product: protective surface antigen D15

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 916; Mature: 916

Protein sequence:

>916_residues
MKKLILSSLVFACINTSVEALENDGSKPNDLTPPKEASQEAQRNEAPKNEVQRNEAQKETPQSNQTPKEMKVKSISYVGL
SYMSDMLANEIVKIRVGDMVDSKKIDTAVLALFNQGYFKDVYATFEGGILEFHFDEKARIAGVEIKGYGTEKEKDGLKSQ
MGIKKGDTFDEQKLEHAKTALKTALEGQGYYGSVVEVRTEKVSEGALLIVFDVNRGDSIYIKQSIYEGSAKLKRRMIESL
SANKQRDFMGWMWGLNDGKLRLDQLEYDSMRIQDVYMRRGYLDAHISSPFLKTDFSTHDAKLHYKVKEGIQYRISDILIE
IDNPVVPLKTLEKALKVKRKDVFNIEHLRADAQILKTEIADKGYAFAVVKPDLDKDEKNGLVKVIYRIEVGDMVYINDVI
ISGNQRTSDRIIRRELLLGPKDKYNLTKLRNSENSLRRLGFFSKVKIEEKRVNSSLMDLLVSVEEGRTGQLQFGLGYGSY
GGLMLNGSVSERNLFGTGQSMSLYANIATGGGRSYPGMPRGAGRMFAGNLSLTNPRIFDSWYSSTINLYADYRISYQYIQ
QGGGFGVNVGRMLGNRTHVSLGYNLNVTKLLGFSSPLYNRYYSSVNEVVSPRQCSTPASVIINRLSGGKTPLVPESCSSP
GAITTSPEIKGIWDRDYHTPITSSFTLDVSYDNTDDYYFPRNGVIFSSYATMSGLPSSGTLNSWNGLGGNVRNTKVYGKF
AAYHHLQKYLLIDLIARFKTQGGYIFRYNTDDYLPLNSTFYMGGVTTVRGFRNGSVTPKDEFGLWLGGDGIFTASTELSY
GVLKAAKMRLAWFFDFGFLTFKTPTRGSFFYNAPVTTANFKDYGVIGSGFERATWRASTGLQIEWISPMGPLVLIFPIAF
FNQWGDGNGKKCKGLCFNPNMDDYTQHFEFSMGTRF

Sequences:

>Translated_916_residues
MKKLILSSLVFACINTSVEALENDGSKPNDLTPPKEASQEAQRNEAPKNEVQRNEAQKETPQSNQTPKEMKVKSISYVGL
SYMSDMLANEIVKIRVGDMVDSKKIDTAVLALFNQGYFKDVYATFEGGILEFHFDEKARIAGVEIKGYGTEKEKDGLKSQ
MGIKKGDTFDEQKLEHAKTALKTALEGQGYYGSVVEVRTEKVSEGALLIVFDVNRGDSIYIKQSIYEGSAKLKRRMIESL
SANKQRDFMGWMWGLNDGKLRLDQLEYDSMRIQDVYMRRGYLDAHISSPFLKTDFSTHDAKLHYKVKEGIQYRISDILIE
IDNPVVPLKTLEKALKVKRKDVFNIEHLRADAQILKTEIADKGYAFAVVKPDLDKDEKNGLVKVIYRIEVGDMVYINDVI
ISGNQRTSDRIIRRELLLGPKDKYNLTKLRNSENSLRRLGFFSKVKIEEKRVNSSLMDLLVSVEEGRTGQLQFGLGYGSY
GGLMLNGSVSERNLFGTGQSMSLYANIATGGGRSYPGMPRGAGRMFAGNLSLTNPRIFDSWYSSTINLYADYRISYQYIQ
QGGGFGVNVGRMLGNRTHVSLGYNLNVTKLLGFSSPLYNRYYSSVNEVVSPRQCSTPASVIINRLSGGKTPLVPESCSSP
GAITTSPEIKGIWDRDYHTPITSSFTLDVSYDNTDDYYFPRNGVIFSSYATMSGLPSSGTLNSWNGLGGNVRNTKVYGKF
AAYHHLQKYLLIDLIARFKTQGGYIFRYNTDDYLPLNSTFYMGGVTTVRGFRNGSVTPKDEFGLWLGGDGIFTASTELSY
GVLKAAKMRLAWFFDFGFLTFKTPTRGSFFYNAPVTTANFKDYGVIGSGFERATWRASTGLQIEWISPMGPLVLIFPIAF
FNQWGDGNGKKCKGLCFNPNMDDYTQHFEFSMGTRF
>Mature_916_residues
MKKLILSSLVFACINTSVEALENDGSKPNDLTPPKEASQEAQRNEAPKNEVQRNEAQKETPQSNQTPKEMKVKSISYVGL
SYMSDMLANEIVKIRVGDMVDSKKIDTAVLALFNQGYFKDVYATFEGGILEFHFDEKARIAGVEIKGYGTEKEKDGLKSQ
MGIKKGDTFDEQKLEHAKTALKTALEGQGYYGSVVEVRTEKVSEGALLIVFDVNRGDSIYIKQSIYEGSAKLKRRMIESL
SANKQRDFMGWMWGLNDGKLRLDQLEYDSMRIQDVYMRRGYLDAHISSPFLKTDFSTHDAKLHYKVKEGIQYRISDILIE
IDNPVVPLKTLEKALKVKRKDVFNIEHLRADAQILKTEIADKGYAFAVVKPDLDKDEKNGLVKVIYRIEVGDMVYINDVI
ISGNQRTSDRIIRRELLLGPKDKYNLTKLRNSENSLRRLGFFSKVKIEEKRVNSSLMDLLVSVEEGRTGQLQFGLGYGSY
GGLMLNGSVSERNLFGTGQSMSLYANIATGGGRSYPGMPRGAGRMFAGNLSLTNPRIFDSWYSSTINLYADYRISYQYIQ
QGGGFGVNVGRMLGNRTHVSLGYNLNVTKLLGFSSPLYNRYYSSVNEVVSPRQCSTPASVIINRLSGGKTPLVPESCSSP
GAITTSPEIKGIWDRDYHTPITSSFTLDVSYDNTDDYYFPRNGVIFSSYATMSGLPSSGTLNSWNGLGGNVRNTKVYGKF
AAYHHLQKYLLIDLIARFKTQGGYIFRYNTDDYLPLNSTFYMGGVTTVRGFRNGSVTPKDEFGLWLGGDGIFTASTELSY
GVLKAAKMRLAWFFDFGFLTFKTPTRGSFFYNAPVTTANFKDYGVIGSGFERATWRASTGLQIEWISPMGPLVLIFPIAF
FNQWGDGNGKKCKGLCFNPNMDDYTQHFEFSMGTRF

Specific function: Unknown

COG id: COG4775

COG function: function code M; Outer membrane protein/protective antigen OMA87

Gene ontology:

Cell location: Cell outer membrane (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the surface antigen D15 family [H]

Homologues:

Organism=Escherichia coli, GI1786374, Length=437, Percent_Identity=24.0274599542334, Blast_Score=123, Evalue=5e-29,

Paralogues:

None

Copy number: 180 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 80 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 380 Molecules/Cell In: Growth-Phase, Minimal-Media (Based on E. coli). 220 Molecules/Cell In: Stationary Phase, Ri

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000184
- InterPro:   IPR016474
- InterPro:   IPR010827 [H]

Pfam domain/function: PF01103 Bac_surface_Ag; PF07244 Surf_Ag_VNR [H]

EC number: NA

Molecular weight: Translated: 102700; Mature: 102700

Theoretical pI: Translated: 9.37; Mature: 9.37

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKLILSSLVFACINTSVEALENDGSKPNDLTPPKEASQEAQRNEAPKNEVQRNEAQKET
CHHHHHHHHHHHHHHCCHHHHHCCCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHCC
PQSNQTPKEMKVKSISYVGLSYMSDMLANEIVKIRVGDMVDSKKIDTAVLALFNQGYFKD
CCCCCCHHHHEEHHHHHHHHHHHHHHHHHHEEEEEECCCCCCCHHHHHHHHHHCCCHHHH
VYATFEGGILEFHFDEKARIAGVEIKGYGTEKEKDGLKSQMGIKKGDTFDEQKLEHAKTA
HHHHHCCCEEEEEECCCCEEEEEEEECCCCCHHHHCHHHHCCCCCCCCCHHHHHHHHHHH
LKTALEGQGYYGSVVEVRTEKVSEGALLIVFDVNRGDSIYIKQSIYEGSAKLKRRMIESL
HHHHHCCCCCCCCEEEEEEEECCCCCEEEEEECCCCCEEEEEECHHCCHHHHHHHHHHHH
SANKQRDFMGWMWGLNDGKLRLDQLEYDSMRIQDVYMRRGYLDAHISSPFLKTDFSTHDA
CCCCCCCHHHEEECCCCCCEEEEEECCCCCHHHHHHHHCCCEEECCCCCEEECCCCCCCE
KLHYKVKEGIQYRISDILIEIDNPVVPLKTLEKALKVKRKDVFNIEHLRADAQILKTEIA
EEEEEECCCHHEEEEEEEEECCCCEECHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHC
DKGYAFAVVKPDLDKDEKNGLVKVIYRIEVGDMVYINDVIISGNQRTSDRIIRRELLLGP
CCCEEEEEECCCCCCCCCCCEEEEEEEEEECCEEEEEEEEEECCCCHHHHHHHHHHHCCC
KDKYNLTKLRNSENSLRRLGFFSKVKIEEKRVNSSLMDLLVSVEEGRTGQLQFGLGYGSY
CCCCCHHHHCCCHHHHHHHCCHHHEEEHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCC
GGLMLNGSVSERNLFGTGQSMSLYANIATGGGRSYPGMPRGAGRMFAGNLSLTNPRIFDS
CCEEEECCCCCCEEECCCCCEEEEEEEECCCCCCCCCCCCCCCCEEECCEECCCCCHHHH
WYSSTINLYADYRISYQYIQQGGGFGVNVGRMLGNRTHVSLGYNLNVTKLLGFSSPLYNR
HHCCEEEEEEEEEEEEEHHHCCCCCCEEHHHHHCCCEEEEEECCCCHHHEECCCCHHHHH
YYSSVNEVVSPRQCSTPASVIINRLSGGKTPLVPESCSSPGAITTSPEIKGIWDRDYHTP
HHHHHHHHCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCEECCCCCCEECCCCCCCC
ITSSFTLDVSYDNTDDYYFPRNGVIFSSYATMSGLPSSGTLNSWNGLGGNVRNTKVYGKF
CCCEEEEEEEECCCCCEEECCCCEEEECCHHHCCCCCCCCCCCCCCCCCCCCCCEEEHHH
AAYHHLQKYLLIDLIARFKTQGGYIFRYNTDDYLPLNSTFYMGGVTTVRGFRNGSVTPKD
HHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCEECCCCEEEECCEEEEEECCCCCCCCCH
EFGLWLGGDGIFTASTELSYGVLKAAKMRLAWFFDFGFLTFKTPTRGSFFYNAPVTTANF
HCCEEECCCEEEEECCCCHHHHHHHHHHEEEEEEECCEEEEECCCCCCEEEECCEEECCC
KDYGVIGSGFERATWRASTGLQIEWISPMGPLVLIFPIAFFNQWGDGNGKKCKGLCFNPN
CCCCCCCCCCCCCEEECCCCEEEEEECCCCCHHHHHHHHHHHCCCCCCCCEEEEEEECCC
MDDYTQHFEFSMGTRF
CCHHHHHHEEECCCCC
>Mature Secondary Structure
MKKLILSSLVFACINTSVEALENDGSKPNDLTPPKEASQEAQRNEAPKNEVQRNEAQKET
CHHHHHHHHHHHHHHCCHHHHHCCCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHCC
PQSNQTPKEMKVKSISYVGLSYMSDMLANEIVKIRVGDMVDSKKIDTAVLALFNQGYFKD
CCCCCCHHHHEEHHHHHHHHHHHHHHHHHHEEEEEECCCCCCCHHHHHHHHHHCCCHHHH
VYATFEGGILEFHFDEKARIAGVEIKGYGTEKEKDGLKSQMGIKKGDTFDEQKLEHAKTA
HHHHHCCCEEEEEECCCCEEEEEEEECCCCCHHHHCHHHHCCCCCCCCCHHHHHHHHHHH
LKTALEGQGYYGSVVEVRTEKVSEGALLIVFDVNRGDSIYIKQSIYEGSAKLKRRMIESL
HHHHHCCCCCCCCEEEEEEEECCCCCEEEEEECCCCCEEEEEECHHCCHHHHHHHHHHHH
SANKQRDFMGWMWGLNDGKLRLDQLEYDSMRIQDVYMRRGYLDAHISSPFLKTDFSTHDA
CCCCCCCHHHEEECCCCCCEEEEEECCCCCHHHHHHHHCCCEEECCCCCEEECCCCCCCE
KLHYKVKEGIQYRISDILIEIDNPVVPLKTLEKALKVKRKDVFNIEHLRADAQILKTEIA
EEEEEECCCHHEEEEEEEEECCCCEECHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHC
DKGYAFAVVKPDLDKDEKNGLVKVIYRIEVGDMVYINDVIISGNQRTSDRIIRRELLLGP
CCCEEEEEECCCCCCCCCCCEEEEEEEEEECCEEEEEEEEEECCCCHHHHHHHHHHHCCC
KDKYNLTKLRNSENSLRRLGFFSKVKIEEKRVNSSLMDLLVSVEEGRTGQLQFGLGYGSY
CCCCCHHHHCCCHHHHHHHCCHHHEEEHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCC
GGLMLNGSVSERNLFGTGQSMSLYANIATGGGRSYPGMPRGAGRMFAGNLSLTNPRIFDS
CCEEEECCCCCCEEECCCCCEEEEEEEECCCCCCCCCCCCCCCCEEECCEECCCCCHHHH
WYSSTINLYADYRISYQYIQQGGGFGVNVGRMLGNRTHVSLGYNLNVTKLLGFSSPLYNR
HHCCEEEEEEEEEEEEEHHHCCCCCCEEHHHHHCCCEEEEEECCCCHHHEECCCCHHHHH
YYSSVNEVVSPRQCSTPASVIINRLSGGKTPLVPESCSSPGAITTSPEIKGIWDRDYHTP
HHHHHHHHCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCEECCCCCCEECCCCCCCC
ITSSFTLDVSYDNTDDYYFPRNGVIFSSYATMSGLPSSGTLNSWNGLGGNVRNTKVYGKF
CCCEEEEEEEECCCCCEEECCCCEEEECCHHHCCCCCCCCCCCCCCCCCCCCCCEEEHHH
AAYHHLQKYLLIDLIARFKTQGGYIFRYNTDDYLPLNSTFYMGGVTTVRGFRNGSVTPKD
HHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCEECCCCEEEECCEEEEEECCCCCCCCCH
EFGLWLGGDGIFTASTELSYGVLKAAKMRLAWFFDFGFLTFKTPTRGSFFYNAPVTTANF
HCCEEECCCEEEEECCCCHHHHHHHHHHEEEEEEECCEEEEECCCCCCEEEECCEEECCC
KDYGVIGSGFERATWRASTGLQIEWISPMGPLVLIFPIAFFNQWGDGNGKKCKGLCFNPN
CCCCCCCCCCCCCEEECCCCEEEEEECCCCCHHHHHHHHHHHCCCCCCCCEEEEEEECCC
MDDYTQHFEFSMGTRF
CCHHHHHHEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 10710307 [H]