Definition Helicobacter pylori HPAG1 chromosome, complete genome.
Accession NC_008086
Length 1,596,366

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The map label for this gene is galU [H]

Identifier: 108563056

GI number: 108563056

Start: 656737

End: 657558

Strand: Direct

Name: galU [H]

Synonym: HPAG1_0631

Alternate gene names: 108563056

Gene position: 656737-657558 (Clockwise)

Preceding gene: 108563055

Following gene: 108563057

Centisome position: 41.14

GC content: 42.58

Gene sequence:

>822_bases
ATGATTAAAAAATGCCTTTTTCCTGCCGCTGGCTACGGCACGCGCTTTTTGCCGATCACTAAAACCATTCCTAAAGAAAT
GCTGCCCATTGTGGATAAGCCTTTAATCCAATACGCTGTGGAAGAAGCGATGGAAGCAGGCTGTGAAGTGATGGCGATCG
TTACAGGCAGGAATAAACGAAGTTTAGAAGATTATTTTGACACGAGCTATGAAATAGAGCATCAAATCCAAGGCACCAAC
AAAGAAAACGCCTTAAAAAGCATTCGTAACGTTATAGAAAAATGCTGTTTTTCTTATGTGCGCCAAAAGCAAATGAAAGG
CTTAGGGCATGCGATTTTAACTGGGGAAGCCCTGATAGGCAATGAGCCTTTTGCGGTGATTTTAGCCGATGACTTGTGCA
TAAGCCATGATCACCCAAGCGTGTTAAAGCAAATGACTTCGTTGTATCAAAAATACCAATGCTCCATTGTAGCCATTGAA
GAAGTGGCGCTAGAAGAAGTTTCAAAATACGGCGTGATTAAGGGCGAATGGTTAGAAGAGGGGGTGTATGAGATTAAAGA
CATGGTGGAAAAACCAAGCCAAGAAGACGCTCCAAGCAATCTGGCCGTGATAGGGCGCTACATTTTAACTCCGGATATTT
TTGAAATTTTAAGCGAGACGAAACCGGGTAAAAACAATGAAATCCAAATCACGGATGCCTTACGCGCTCAAGCCAAAAGA
AAACGCATCATCGCTTACCAATTCAAAGGCAAGCGATACGATTGCGGGAGCGTGGAAGGCTATATTGAAGCGAGTAACGC
TTATTATAAAAAACGCTTATAA

Upstream 100 bases:

>100_bases
TTAGAGTCATGCTCAATTACTTGATTTATCAAGAAATTTTTGGGAATTTCATCCCTATTGATGCATTTTTAGAACAAACT
CTTAACTCAAAGGACAAACC

Downstream 100 bases:

>100_bases
ATCTATCAACATGGGCAATTTGACTTATTACGCTTACATGTATTTGATCCTCTTTGTATGCTTGATCCCTGTGTTATTAA
TGGGGCTTGCTTGGAGACTT

Product: UDP-glucose pyrophosphorylase

Products: NA

Alternate protein names: Alpha-D-glucosyl-1-phosphate uridylyltransferase; UDP-glucose pyrophosphorylase; UDPGP; Uridine diphosphoglucose pyrophosphorylase [H]

Number of amino acids: Translated: 273; Mature: 273

Protein sequence:

>273_residues
MIKKCLFPAAGYGTRFLPITKTIPKEMLPIVDKPLIQYAVEEAMEAGCEVMAIVTGRNKRSLEDYFDTSYEIEHQIQGTN
KENALKSIRNVIEKCCFSYVRQKQMKGLGHAILTGEALIGNEPFAVILADDLCISHDHPSVLKQMTSLYQKYQCSIVAIE
EVALEEVSKYGVIKGEWLEEGVYEIKDMVEKPSQEDAPSNLAVIGRYILTPDIFEILSETKPGKNNEIQITDALRAQAKR
KRIIAYQFKGKRYDCGSVEGYIEASNAYYKKRL

Sequences:

>Translated_273_residues
MIKKCLFPAAGYGTRFLPITKTIPKEMLPIVDKPLIQYAVEEAMEAGCEVMAIVTGRNKRSLEDYFDTSYEIEHQIQGTN
KENALKSIRNVIEKCCFSYVRQKQMKGLGHAILTGEALIGNEPFAVILADDLCISHDHPSVLKQMTSLYQKYQCSIVAIE
EVALEEVSKYGVIKGEWLEEGVYEIKDMVEKPSQEDAPSNLAVIGRYILTPDIFEILSETKPGKNNEIQITDALRAQAKR
KRIIAYQFKGKRYDCGSVEGYIEASNAYYKKRL
>Mature_273_residues
MIKKCLFPAAGYGTRFLPITKTIPKEMLPIVDKPLIQYAVEEAMEAGCEVMAIVTGRNKRSLEDYFDTSYEIEHQIQGTN
KENALKSIRNVIEKCCFSYVRQKQMKGLGHAILTGEALIGNEPFAVILADDLCISHDHPSVLKQMTSLYQKYQCSIVAIE
EVALEEVSKYGVIKGEWLEEGVYEIKDMVEKPSQEDAPSNLAVIGRYILTPDIFEILSETKPGKNNEIQITDALRAQAKR
KRIIAYQFKGKRYDCGSVEGYIEASNAYYKKRL

Specific function: May play a role in stationary phase survival [H]

COG id: COG1210

COG function: function code M; UDP-glucose pyrophosphorylase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UDPGP type 2 family [H]

Homologues:

Organism=Escherichia coli, GI1787488, Length=277, Percent_Identity=41.8772563176895, Blast_Score=208, Evalue=3e-55,
Organism=Escherichia coli, GI1788355, Length=281, Percent_Identity=37.7224199288256, Blast_Score=166, Evalue=2e-42,
Organism=Escherichia coli, GI1788351, Length=268, Percent_Identity=27.2388059701493, Blast_Score=92, Evalue=5e-20,
Organism=Escherichia coli, GI1790224, Length=272, Percent_Identity=27.9411764705882, Blast_Score=78, Evalue=8e-16,

Paralogues:

None

Copy number: 120 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 140 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 260 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005771
- InterPro:   IPR005835 [H]

Pfam domain/function: PF00483 NTP_transferase [H]

EC number: =2.7.7.9 [H]

Molecular weight: Translated: 30877; Mature: 30877

Theoretical pI: Translated: 6.52; Mature: 6.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.6 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
2.6 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIKKCLFPAAGYGTRFLPITKTIPKEMLPIVDKPLIQYAVEEAMEAGCEVMAIVTGRNKR
CCCHHCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCC
SLEDYFDTSYEIEHQIQGTNKENALKSIRNVIEKCCFSYVRQKQMKGLGHAILTGEALIG
HHHHHHCCCEEEEHEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHEECCEEEC
NEPFAVILADDLCISHDHPSVLKQMTSLYQKYQCSIVAIEEVALEEVSKYGVIKGEWLEE
CCCEEEEEECCEEECCCCHHHHHHHHHHHHHHCCCEEHHHHHHHHHHHHCCCCCCHHHHH
GVYEIKDMVEKPSQEDAPSNLAVIGRYILTPDIFEILSETKPGKNNEIQITDALRAQAKR
HHHHHHHHHHCCCCCCCCCCHHHHHHHHCCHHHHHHHHCCCCCCCCEEEEHHHHHHHHHH
KRIIAYQFKGKRYDCGSVEGYIEASNAYYKKRL
CCEEEEEECCCCCCCCCCCCEEECCCCHHHCCC
>Mature Secondary Structure
MIKKCLFPAAGYGTRFLPITKTIPKEMLPIVDKPLIQYAVEEAMEAGCEVMAIVTGRNKR
CCCHHCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCC
SLEDYFDTSYEIEHQIQGTNKENALKSIRNVIEKCCFSYVRQKQMKGLGHAILTGEALIG
HHHHHHCCCEEEEHEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHEECCEEEC
NEPFAVILADDLCISHDHPSVLKQMTSLYQKYQCSIVAIEEVALEEVSKYGVIKGEWLEE
CCCEEEEEECCEEECCCCHHHHHHHHHHHHHHCCCEEHHHHHHHHHHHHCCCCCCHHHHH
GVYEIKDMVEKPSQEDAPSNLAVIGRYILTPDIFEILSETKPGKNNEIQITDALRAQAKR
HHHHHHHHHHCCCCCCCCCCHHHHHHHHCCHHHHHHHHCCCCCCCCEEEEHHHHHHHHHH
KRIIAYQFKGKRYDCGSVEGYIEASNAYYKKRL
CCEEEEEECCCCCCCCCCCCEEECCCCHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10984043 [H]