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The map label for this gene is 108562971

Identifier: 108562971

GI number: 108562971

Start: 564500

End: 565549

Strand: Direct

Name: 108562971

Synonym: HPAG1_0546

Alternate gene names: NA

Gene position: 564500-565549 (Clockwise)

Preceding gene: 108562968

Following gene: 108562991

Centisome position: 35.36

GC content: 36.86

Gene sequence:

>1050_bases
ATGAAAGCTCAGTATTTCTTTTGGATTCTTTTTTTGATTGGTTTTTATTGGATGATCTATTTGTATCAAGATTTTTTGAT
GGATGCACTGATCGCTGGGCTTTTGTGCGTGGGGTTTTTTCAAGTGAAAGTTTTTTTAGATAAGCGCTTTTTCAATATTG
TCAGTTCGTTTTTATGCGTTTTGATTTTAGCGAGCGTTTTGATCGTGCCGTTGTATTTTATTGTTTATAAAAGTTCTAAT
ATCATTTTTGAAATCAATTTTGAAAAATTTTCAGCCCTAATCAAATGGCTTAAAGGGATAATCACCGAGAATTTATCGCA
TTTTCCTACCATTCATGATGGAGTGAGCAAGTTTTTAGAAAATTTTAACGCCGCTTCAATCACGGGCTATTTGCTGAAAA
TAAGCAGCTATGTGGGAAAATACAGCTTGAAACTCATTACAGACGCTTTGTTTATCTTGGGGCTGTTGTTTTTCTTTTTT
TATTACGGGGAGAGGTTTTATCGTTATTTTTTAGGGGTCTTGCCTCTTGGAATCAATCAAAGCAAAAAGATTTTTGAAGA
AGTGGCTGGGATTTTACGCATCGTGCTTTTAACTTCCCTCATCACGGTTATTTTAGAGGGCGTGGCGTTTGGGGTGATGA
TCGTATGGTTTGGGCATGACGGCTGGTCTTTAGGGATTTTATACGGCCTAGCGTCTTTAGTGCCGGCTGTTGGGGGGGCT
TTGATTTGGATTCCTGTAGCGATTTATGAGCTTTATCATGGGAATGTGAATGAGGCGATATTTATCGCTTTGTATTCCAT
TTTATTAATTAGCGTGCTGATTGATAGCGTGATCAAGCCAATTTTAATCGTCTTCATCAAAAAAAGAATCTTTAAAACCA
CCCTTAAAATCAATGAAATGCTGATTTTCTTTTCCATGATCGCTGGGATTTCACAATTTGGTTTTTGGGGGATTATTGTA
GGGCCTACTATCACGGCGTTTTTTATTGCGTTACTGCGATTGTATGAAAATTACTTTATCCAAAACGATCAAAAAGCATG
CGAGTGTTGA

Upstream 100 bases:

>100_bases
TTGATTTTAATTATAAGTTAAAAGAGGTTTTTTATCCTTAAAAGAGCGTTTTTTAGCTAACATTTGATAATTTTTGGTTC
AGTTTAATGGGGATAATTTC

Downstream 100 bases:

>100_bases
ATGAAATAACGCAAAACAACTAAAAAGCGTAGAAATCAAAGAGTGGGGTCAATTAGTGTTTTTGAATGGCATCAAGAGAA
GCCCACGATTTTTCGACCCC

Product: membrane protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 349; Mature: 349

Protein sequence:

>349_residues
MKAQYFFWILFLIGFYWMIYLYQDFLMDALIAGLLCVGFFQVKVFLDKRFFNIVSSFLCVLILASVLIVPLYFIVYKSSN
IIFEINFEKFSALIKWLKGIITENLSHFPTIHDGVSKFLENFNAASITGYLLKISSYVGKYSLKLITDALFILGLLFFFF
YYGERFYRYFLGVLPLGINQSKKIFEEVAGILRIVLLTSLITVILEGVAFGVMIVWFGHDGWSLGILYGLASLVPAVGGA
LIWIPVAIYELYHGNVNEAIFIALYSILLISVLIDSVIKPILIVFIKKRIFKTTLKINEMLIFFSMIAGISQFGFWGIIV
GPTITAFFIALLRLYENYFIQNDQKACEC

Sequences:

>Translated_349_residues
MKAQYFFWILFLIGFYWMIYLYQDFLMDALIAGLLCVGFFQVKVFLDKRFFNIVSSFLCVLILASVLIVPLYFIVYKSSN
IIFEINFEKFSALIKWLKGIITENLSHFPTIHDGVSKFLENFNAASITGYLLKISSYVGKYSLKLITDALFILGLLFFFF
YYGERFYRYFLGVLPLGINQSKKIFEEVAGILRIVLLTSLITVILEGVAFGVMIVWFGHDGWSLGILYGLASLVPAVGGA
LIWIPVAIYELYHGNVNEAIFIALYSILLISVLIDSVIKPILIVFIKKRIFKTTLKINEMLIFFSMIAGISQFGFWGIIV
GPTITAFFIALLRLYENYFIQNDQKACEC
>Mature_349_residues
MKAQYFFWILFLIGFYWMIYLYQDFLMDALIAGLLCVGFFQVKVFLDKRFFNIVSSFLCVLILASVLIVPLYFIVYKSSN
IIFEINFEKFSALIKWLKGIITENLSHFPTIHDGVSKFLENFNAASITGYLLKISSYVGKYSLKLITDALFILGLLFFFF
YYGERFYRYFLGVLPLGINQSKKIFEEVAGILRIVLLTSLITVILEGVAFGVMIVWFGHDGWSLGILYGLASLVPAVGGA
LIWIPVAIYELYHGNVNEAIFIALYSILLISVLIDSVIKPILIVFIKKRIFKTTLKINEMLIFFSMIAGISQFGFWGIIV
GPTITAFFIALLRLYENYFIQNDQKACEC

Specific function: Unknown

COG id: COG0628

COG function: function code R; Predicted permease

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0118 (perM) family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002549 [H]

Pfam domain/function: PF01594 UPF0118 [H]

EC number: NA

Molecular weight: Translated: 39937; Mature: 39937

Theoretical pI: Translated: 8.73; Mature: 8.73

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKAQYFFWILFLIGFYWMIYLYQDFLMDALIAGLLCVGFFQVKVFLDKRFFNIVSSFLCV
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LILASVLIVPLYFIVYKSSNIIFEINFEKFSALIKWLKGIITENLSHFPTIHDGVSKFLE
HHHHHHHHHHHHHHHHCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH
NFNAASITGYLLKISSYVGKYSLKLITDALFILGLLFFFFYYGERFYRYFLGVLPLGINQ
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
SKKIFEEVAGILRIVLLTSLITVILEGVAFGVMIVWFGHDGWSLGILYGLASLVPAVGGA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCHHHHHHHHHHHHHHHHCCH
LIWIPVAIYELYHGNVNEAIFIALYSILLISVLIDSVIKPILIVFIKKRIFKTTLKINEM
HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LIFFSMIAGISQFGFWGIIVGPTITAFFIALLRLYENYFIQNDQKACEC
HHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHCCC
>Mature Secondary Structure
MKAQYFFWILFLIGFYWMIYLYQDFLMDALIAGLLCVGFFQVKVFLDKRFFNIVSSFLCV
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LILASVLIVPLYFIVYKSSNIIFEINFEKFSALIKWLKGIITENLSHFPTIHDGVSKFLE
HHHHHHHHHHHHHHHHCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH
NFNAASITGYLLKISSYVGKYSLKLITDALFILGLLFFFFYYGERFYRYFLGVLPLGINQ
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
SKKIFEEVAGILRIVLLTSLITVILEGVAFGVMIVWFGHDGWSLGILYGLASLVPAVGGA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCHHHHHHHHHHHHHHHHCCH
LIWIPVAIYELYHGNVNEAIFIALYSILLISVLIDSVIKPILIVFIKKRIFKTTLKINEM
HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LIFFSMIAGISQFGFWGIIVGPTITAFFIALLRLYENYFIQNDQKACEC
HHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9923682 [H]