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The map label for this gene is 108562947

Identifier: 108562947

GI number: 108562947

Start: 544899

End: 545246

Strand: Reverse

Name: 108562947

Synonym: HPAG1_0522

Alternate gene names: NA

Gene position: 545246-544899 (Counterclockwise)

Preceding gene: 108562948

Following gene: 108562946

Centisome position: 34.16

GC content: 43.1

Gene sequence:

>348_bases
ATGAAATTTTTTACAAGAATCACTGACAGCTACAAGAAAGTTGTAGTAACTTTAGGGCTAGCGATAACAACCAATCCTTT
AATGGCGGTCACCAGTCCTGCAACAGGCGTCACTGAAACTAGAACTTTGGTTATTCAGATCATTTCTGTTCTAGCGATCG
TAGGTGGTTGCGCTTTAGGGGTCAAAGGCATAGCGGATATTTGGAAAATCTCTGATGACATCAAAAGAGGTCAGGCGACT
GTTTTTGCTTACGCGCAACCCATAGCTATGTTAGCGGTGGCAGGCGGTATTATCTATTTGAGCACTAAGTTTGGCTTCAA
TATTGGCGAAAGTGGAGGAGCTAGCTAA

Upstream 100 bases:

>100_bases
GTTTTGATTTAAATTTATGAAGTAGCGCTTGTATGAATAGTATAAAAATACTTTATTTTTGGTATACTCAAGCGATTGAT
TTCAATTTGAAAGGAAACGC

Downstream 100 bases:

>100_bases
ATTGATCAACAATAATAGTAGTAAAAAACTGAGAGGCTTTTTTTTGAAAGTTCTCTTAAGTCTCGTTGTTTTCAGTTCGT
ATGGGTTAGCAAATGACGAT

Product: cag pathogenicity island protein C

Products: NA

Alternate protein names: Cag Pathogenicity Island Protein

Number of amino acids: Translated: 115; Mature: 115

Protein sequence:

>115_residues
MKFFTRITDSYKKVVVTLGLAITTNPLMAVTSPATGVTETRTLVIQIISVLAIVGGCALGVKGIADIWKISDDIKRGQAT
VFAYAQPIAMLAVAGGIIYLSTKFGFNIGESGGAS

Sequences:

>Translated_115_residues
MKFFTRITDSYKKVVVTLGLAITTNPLMAVTSPATGVTETRTLVIQIISVLAIVGGCALGVKGIADIWKISDDIKRGQAT
VFAYAQPIAMLAVAGGIIYLSTKFGFNIGESGGAS
>Mature_115_residues
MKFFTRITDSYKKVVVTLGLAITTNPLMAVTSPATGVTETRTLVIQIISVLAIVGGCALGVKGIADIWKISDDIKRGQAT
VFAYAQPIAMLAVAGGIIYLSTKFGFNIGESGGAS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 11983; Mature: 11983

Theoretical pI: Translated: 9.94; Mature: 9.94

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKFFTRITDSYKKVVVTLGLAITTNPLMAVTSPATGVTETRTLVIQIISVLAIVGGCALG
CCHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHH
VKGIADIWKISDDIKRGQATVFAYAQPIAMLAVAGGIIYLSTKFGFNIGESGGAS
HHHHHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHCCEEEEEECCCCCCCCCCCCC
>Mature Secondary Structure
MKFFTRITDSYKKVVVTLGLAITTNPLMAVTSPATGVTETRTLVIQIISVLAIVGGCALG
CCHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHH
VKGIADIWKISDDIKRGQATVFAYAQPIAMLAVAGGIIYLSTKFGFNIGESGGAS
HHHHHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHCCEEEEEECCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA