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The map label for this gene is 108562948

Identifier: 108562948

GI number: 108562948

Start: 545391

End: 545618

Strand: Reverse

Name: 108562948

Synonym: HPAG1_0523

Alternate gene names: NA

Gene position: 545618-545391 (Counterclockwise)

Preceding gene: 108562950

Following gene: 108562947

Centisome position: 34.18

GC content: 33.77

Gene sequence:

>228_bases
ATGGAAAACAAATCAATAGGACAGATTTTCAAAGAGAGTCTCAAAAAAAGTTTCTTTAGTGGTCTATGGAGTTGCTTAAA
ATGGAGTTTTGTTCTCACTCTGATCAGCTTGGGTTTGTTTTTGCTTGTTTTTAGGTTTGAACCTGAGACGATTAAAAAAT
ACATCAAAGATCCTAAAGATCTACAATTCTACAACGACTTGAGAAAGAAAAATGGTTGGGACAAGTAG

Upstream 100 bases:

>100_bases
ATGCAAGGTGAGTGCATGAAGCATTCTAAAAATAGTTTGGTTTGTGTGTGTCATACTTACCATTAAGTATATATTTGCAA
TTAAGCGTTTGTGATTCACA

Downstream 100 bases:

>100_bases
GTTTACTATTCCTGAATGATGTCAGTTGTCAAACAAAAGCGTCGGTTTTGATTTAAATTTATGAAGTAGCGCTTGTATGA
ATAGTATAAAAATACTTTAT

Product: cag pathogenicity island protein B

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 75; Mature: 75

Protein sequence:

>75_residues
MENKSIGQIFKESLKKSFFSGLWSCLKWSFVLTLISLGLFLLVFRFEPETIKKYIKDPKDLQFYNDLRKKNGWDK

Sequences:

>Translated_75_residues
MENKSIGQIFKESLKKSFFSGLWSCLKWSFVLTLISLGLFLLVFRFEPETIKKYIKDPKDLQFYNDLRKKNGWDK
>Mature_75_residues
MENKSIGQIFKESLKKSFFSGLWSCLKWSFVLTLISLGLFLLVFRFEPETIKKYIKDPKDLQFYNDLRKKNGWDK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 8984; Mature: 8984

Theoretical pI: Translated: 10.29; Mature: 10.29

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MENKSIGQIFKESLKKSFFSGLWSCLKWSFVLTLISLGLFLLVFRFEPETIKKYIKDPKD
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCHH
LQFYNDLRKKNGWDK
HHHHHHHHHCCCCCC
>Mature Secondary Structure
MENKSIGQIFKESLKKSFFSGLWSCLKWSFVLTLISLGLFLLVFRFEPETIKKYIKDPKD
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCHH
LQFYNDLRKKNGWDK
HHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA