Click here to switch to the map view.

The map label for this gene is 108562946

Identifier: 108562946

GI number: 108562946

Start: 544274

End: 544924

Strand: Reverse

Name: 108562946

Synonym: HPAG1_0521

Alternate gene names: NA

Gene position: 544924-544274 (Counterclockwise)

Preceding gene: 108562947

Following gene: 108562945

Centisome position: 34.14

GC content: 32.26

Gene sequence:

>651_bases
TTGGCGAAAGTGGAGGAGCTAGCTAAATTGATCAACAATAATAGTAGTAAAAAACTGAGAGGCTTTTTTTTGAAAGTTCT
CTTAAGTCTCGTTGTTTTCAGTTCGTATGGGTTAGCAAATGACGATAAAGAAGCCAAAAAAGAAGCGCTAGAAAAAGAAA
AAAACACTCCCAATGGGCTTGTTTATACGAATTTAGATTTTGATAGTTTTAAAGCGACTATCAAAAATTTGAAAGACAAG
AAAGTAACTTTCAAAGAAGTCAATCCCGATATTATCAAAGATGAAGTTTTTGACTTCGTGATTGTCAATAGAGTCCTTAA
AAAAATAAAGGATTTGAAGCATTACGATCCAATCATTGAAAAAATCTTTGATGAAAAGGGTAAAGAAATGGGATTGAATG
TAGAATTACAGATCAATCCTGAAGTGAAAGACTTTTTTACTTTCAAAAGCATCAGCACGACCAACAAACAACGTTGCTTT
CTGTCATTACGCGGAGAAACAAGAGAAATTTTATGCGATGATAAGCTATATAATGTTTTATTGGCCGTATTCAATTCTTA
TGATCCTAATGATCTTTTGAAACATATTAGCACCGTAGAGTCTCTCAAAAAAATCTTTTATACGATTACATGTGAAGCGG
TATATCTATAA

Upstream 100 bases:

>100_bases
AAAAGAGGTCAGGCGACTGTTTTTGCTTACGCGCAACCCATAGCTATGTTAGCGGTGGCAGGCGGTATTATCTATTTGAG
CACTAAGTTTGGCTTCAATA

Downstream 100 bases:

>100_bases
AGAGAGGGGTGTTTGTGGCGAGCAAGCAGGCTGATGAACAAAAAAAGCTAATCATAGAGCAAGAGGTTCAAAAGCGCCAA
TTTCAAAAAATAGAAGAACT

Product: cag pathogenicity island protein D

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 216; Mature: 215

Protein sequence:

>216_residues
MAKVEELAKLINNNSSKKLRGFFLKVLLSLVVFSSYGLANDDKEAKKEALEKEKNTPNGLVYTNLDFDSFKATIKNLKDK
KVTFKEVNPDIIKDEVFDFVIVNRVLKKIKDLKHYDPIIEKIFDEKGKEMGLNVELQINPEVKDFFTFKSISTTNKQRCF
LSLRGETREILCDDKLYNVLLAVFNSYDPNDLLKHISTVESLKKIFYTITCEAVYL

Sequences:

>Translated_216_residues
MAKVEELAKLINNNSSKKLRGFFLKVLLSLVVFSSYGLANDDKEAKKEALEKEKNTPNGLVYTNLDFDSFKATIKNLKDK
KVTFKEVNPDIIKDEVFDFVIVNRVLKKIKDLKHYDPIIEKIFDEKGKEMGLNVELQINPEVKDFFTFKSISTTNKQRCF
LSLRGETREILCDDKLYNVLLAVFNSYDPNDLLKHISTVESLKKIFYTITCEAVYL
>Mature_215_residues
AKVEELAKLINNNSSKKLRGFFLKVLLSLVVFSSYGLANDDKEAKKEALEKEKNTPNGLVYTNLDFDSFKATIKNLKDKK
VTFKEVNPDIIKDEVFDFVIVNRVLKKIKDLKHYDPIIEKIFDEKGKEMGLNVELQINPEVKDFFTFKSISTTNKQRCFL
SLRGETREILCDDKLYNVLLAVFNSYDPNDLLKHISTVESLKKIFYTITCEAVYL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24965; Mature: 24834

Theoretical pI: Translated: 8.73; Mature: 8.73

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
0.5 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAKVEELAKLINNNSSKKLRGFFLKVLLSLVVFSSYGLANDDKEAKKEALEKEKNTPNGL
CCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCE
VYTNLDFDSFKATIKNLKDKKVTFKEVNPDIIKDEVFDFVIVNRVLKKIKDLKHYDPIIE
EEECCCHHHHHHHHHHCCCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KIFDEKGKEMGLNVELQINPEVKDFFTFKSISTTNKQRCFLSLRGETREILCDDKLYNVL
HHHHHCCHHCCCEEEEEECCCHHHHHHHHHCCCCCCCEEEEEECCCCHHHHHHHHHHHHH
LAVFNSYDPNDLLKHISTVESLKKIFYTITCEAVYL
HHHHCCCCHHHHHHHHHHHHHHHHHHHHHEEEEEEC
>Mature Secondary Structure 
AKVEELAKLINNNSSKKLRGFFLKVLLSLVVFSSYGLANDDKEAKKEALEKEKNTPNGL
CCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCE
VYTNLDFDSFKATIKNLKDKKVTFKEVNPDIIKDEVFDFVIVNRVLKKIKDLKHYDPIIE
EEECCCHHHHHHHHHHCCCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KIFDEKGKEMGLNVELQINPEVKDFFTFKSISTTNKQRCFLSLRGETREILCDDKLYNVL
HHHHHCCHHCCCEEEEEECCCHHHHHHHHHCCCCCCCEEEEEECCCCHHHHHHHHHHHHH
LAVFNSYDPNDLLKHISTVESLKKIFYTITCEAVYL
HHHHCCCCHHHHHHHHHHHHHHHHHHHHHEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA