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The map label for this gene is 108562660

Identifier: 108562660

GI number: 108562660

Start: 239443

End: 240093

Strand: Direct

Name: 108562660

Synonym: HPAG1_0235

Alternate gene names: NA

Gene position: 239443-240093 (Clockwise)

Preceding gene: 108562659

Following gene: 108562661

Centisome position: 15.0

GC content: 46.54

Gene sequence:

>651_bases
ATGAAAAAACCCTACAGAAAGATTTCTGATTATGCGATCGTGGGTGGTTTGAGCGCGTTAGTGATGGTGAGCATTGTGGG
GTGTAAGAGCAATGCTGATGACAAACCCAAAGAGCAAAGCTCTCTAAGTCAAAGCGTTCAAAAAGGCGCGTTTGTGATTT
TAGAAGAGCAAAAGGATAAATCTTACAAGGTTGTTGAAGAATACCCCAGCTCAAGAACCCACATTGTCGTGCGCGATTTG
CAAGGCAATGAACGAGTGCTCAGCGATGAAGAGATTCAAAAGCTCATCAAAGAAGAAGAAGCTAAAATTGATAACGGCAC
GAGCAAACTTGTCCAGCCTAATAATGGAGGAGGGAGTAATGAAGGCTCAGGCTTTGGCTTGGGGAGCGCGATTTTAGGGA
GTGCGGCGGGGGCGATTTTAGGGAGTTATATTGGCAATAAGCTTTTCAATAACCCTAATTATCAGCAAAACGCCCAACGG
ACCTACAAATCCCCACAAGCTTACCAACGCTCTCAAAATTCCTTTTCTAAAAGTGCGCCTAGCGCTTCAGGCATGGGCAC
AGCGAGTAAGGGACAGAGCGGTTTTTTTGGCTCTAGTAGGCCTACTAGCTCGCCGGCGGTAAGCTCTGGGACAAGGGGCT
TTAACGCATAA

Upstream 100 bases:

>100_bases
CACTAAAGTGGAAAATACCACTAAAAAGATTTTTGAATCTGGCGTGATTAAGGGTGTGCCTTTCTTGTATCATTATAAGG
CATGATATAAGGTTGCTCTC

Downstream 100 bases:

>100_bases
AATCTATTTTAAGGTTAAAAAATGCAAGTGATTCCTTTAAAACCTTTAGACAATAAGACTTTAGAAGAAATCGGCCTAGA
TTGGCACACTAATGATGACA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 216; Mature: 216

Protein sequence:

>216_residues
MKKPYRKISDYAIVGGLSALVMVSIVGCKSNADDKPKEQSSLSQSVQKGAFVILEEQKDKSYKVVEEYPSSRTHIVVRDL
QGNERVLSDEEIQKLIKEEEAKIDNGTSKLVQPNNGGGSNEGSGFGLGSAILGSAAGAILGSYIGNKLFNNPNYQQNAQR
TYKSPQAYQRSQNSFSKSAPSASGMGTASKGQSGFFGSSRPTSSPAVSSGTRGFNA

Sequences:

>Translated_216_residues
MKKPYRKISDYAIVGGLSALVMVSIVGCKSNADDKPKEQSSLSQSVQKGAFVILEEQKDKSYKVVEEYPSSRTHIVVRDL
QGNERVLSDEEIQKLIKEEEAKIDNGTSKLVQPNNGGGSNEGSGFGLGSAILGSAAGAILGSYIGNKLFNNPNYQQNAQR
TYKSPQAYQRSQNSFSKSAPSASGMGTASKGQSGFFGSSRPTSSPAVSSGTRGFNA
>Mature_216_residues
MKKPYRKISDYAIVGGLSALVMVSIVGCKSNADDKPKEQSSLSQSVQKGAFVILEEQKDKSYKVVEEYPSSRTHIVVRDL
QGNERVLSDEEIQKLIKEEEAKIDNGTSKLVQPNNGGGSNEGSGFGLGSAILGSAAGAILGSYIGNKLFNNPNYQQNAQR
TYKSPQAYQRSQNSFSKSAPSASGMGTASKGQSGFFGSSRPTSSPAVSSGTRGFNA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Lipid-anchor [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0323 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020913 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22929; Mature: 22929

Theoretical pI: Translated: 9.90; Mature: 9.90

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKPYRKISDYAIVGGLSALVMVSIVGCKSNADDKPKEQSSLSQSVQKGAFVILEEQKDK
CCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCEEEEEECCCCC
SYKVVEEYPSSRTHIVVRDLQGNERVLSDEEIQKLIKEEEAKIDNGTSKLVQPNNGGGSN
CHHHHHHCCCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHHCCCCCHHEECCCCCCCCC
EGSGFGLGSAILGSAAGAILGSYIGNKLFNNPNYQQNAQRTYKSPQAYQRSQNSFSKSAP
CCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCHHHHHHHHHHHHHCCC
SASGMGTASKGQSGFFGSSRPTSSPAVSSGTRGFNA
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MKKPYRKISDYAIVGGLSALVMVSIVGCKSNADDKPKEQSSLSQSVQKGAFVILEEQKDK
CCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCEEEEEECCCCC
SYKVVEEYPSSRTHIVVRDLQGNERVLSDEEIQKLIKEEEAKIDNGTSKLVQPNNGGGSN
CHHHHHHCCCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHHCCCCCHHEECCCCCCCCC
EGSGFGLGSAILGSAAGAILGSYIGNKLFNNPNYQQNAQRTYKSPQAYQRSQNSFSKSAP
CCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCHHHHHHHHHHHHHCCC
SASGMGTASKGQSGFFGSSRPTSSPAVSSGTRGFNA
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA