| Definition | Helicobacter pylori HPAG1 chromosome, complete genome. |
|---|---|
| Accession | NC_008086 |
| Length | 1,596,366 |
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The map label for this gene is 108562659
Identifier: 108562659
GI number: 108562659
Start: 238630
End: 239427
Strand: Direct
Name: 108562659
Synonym: HPAG1_0234
Alternate gene names: NA
Gene position: 238630-239427 (Clockwise)
Preceding gene: 108562656
Following gene: 108562660
Centisome position: 14.95
GC content: 39.97
Gene sequence:
>798_bases ATGATATTAAGAGCGAGTGTGTTGAGCGCGTTACTTCTTGTAAGCTTAGGGGCAGCCCCTAAACATTCAGTTTCAGCCAA TGACAAACGGATGCAGGATAATTTAGTGAGCGTGATTGAAAAACAGACCAATAAAAAGGTGCGTATTTTAGAGATCAAAC CTTTAAAATCCAGCCAGGATTTAAAAATGGTCGTCATTGAAGATCCGGACACTAAATACAATATCCCGCTTGTAGTGAGT AAGGATGGAAATTTAGTCATAGGGCTTAGCAACATATTCTTTAGCAATAAAAGCGAAGATGTGCAATTAGTCGCAGAAAC CAATCAAAAGGTTCAAGCTCTTAACGCCACCCAACAAAACAGCGCGAAATTGAACGCTATTTTTAATGAAATACCGGCTG ATTATGCGATAGAGTTGCCCTCTACTAACGCTGCAAATAAGGATAAAATCCTTTATATTGTCTCTGATCCCATGTGCCCG CATTGCCAAAAAGAGCTCACTAAACTTAGGGATCACTTAAAAGAAAACACCGTGAGAATGGTTGTAGTGGGGTGGCTTGG AGTCAATTCGGCTAAAAAAGCGGCTTTGATCCAAGAAGAAATGGCGAAAGCTAGGGCTAGGGGAGCGAGCGTGGAAGATA AAATCTCTATTCTTGAAAAGATTTATTCCACCCAATACGATATTAACGCTCAAAAAGAGCCTGAAGATTTACGCACTAAA GTGGAAAATACCACTAAAAAGATTTTTGAATCTGGCGTGATTAAGGGTGTGCCTTTCTTGTATCATTATAAGGCATGA
Upstream 100 bases:
>100_bases TTAAGCCTTGTGAAAATAGGGGATTTTTATGGTATTATACCCATTAAAAGCTTATTCCTTTTGTTGTAAGGATTTAGGCT ATTGAACTTTAGGAGTTTTA
Downstream 100 bases:
>100_bases TATAAGGTTGCTCTCATGAAAAAACCCTACAGAAAGATTTCTGATTATGCGATCGTGGGTGGTTTGAGCGCGTTAGTGAT GGTGAGCATTGTGGGGTGTA
Product: hypothetical protein
Products: NA
Alternate protein names: Protein Disulphide Isomerase; Protein Disulfide Isomerase; Protein-Disulfide Isomerase
Number of amino acids: Translated: 265; Mature: 265
Protein sequence:
>265_residues MILRASVLSALLLVSLGAAPKHSVSANDKRMQDNLVSVIEKQTNKKVRILEIKPLKSSQDLKMVVIEDPDTKYNIPLVVS KDGNLVIGLSNIFFSNKSEDVQLVAETNQKVQALNATQQNSAKLNAIFNEIPADYAIELPSTNAANKDKILYIVSDPMCP HCQKELTKLRDHLKENTVRMVVVGWLGVNSAKKAALIQEEMAKARARGASVEDKISILEKIYSTQYDINAQKEPEDLRTK VENTTKKIFESGVIKGVPFLYHYKA
Sequences:
>Translated_265_residues MILRASVLSALLLVSLGAAPKHSVSANDKRMQDNLVSVIEKQTNKKVRILEIKPLKSSQDLKMVVIEDPDTKYNIPLVVS KDGNLVIGLSNIFFSNKSEDVQLVAETNQKVQALNATQQNSAKLNAIFNEIPADYAIELPSTNAANKDKILYIVSDPMCP HCQKELTKLRDHLKENTVRMVVVGWLGVNSAKKAALIQEEMAKARARGASVEDKISILEKIYSTQYDINAQKEPEDLRTK VENTTKKIFESGVIKGVPFLYHYKA >Mature_265_residues MILRASVLSALLLVSLGAAPKHSVSANDKRMQDNLVSVIEKQTNKKVRILEIKPLKSSQDLKMVVIEDPDTKYNIPLVVS KDGNLVIGLSNIFFSNKSEDVQLVAETNQKVQALNATQQNSAKLNAIFNEIPADYAIELPSTNAANKDKILYIVSDPMCP HCQKELTKLRDHLKENTVRMVVVGWLGVNSAKKAALIQEEMAKARARGASVEDKISILEKIYSTQYDINAQKEPEDLRTK VENTTKKIFESGVIKGVPFLYHYKA
Specific function: Unknown
COG id: COG1651
COG function: function code O; Protein-disulfide isomerase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29489; Mature: 29489
Theoretical pI: Translated: 9.58; Mature: 9.58
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MILRASVLSALLLVSLGAAPKHSVSANDKRMQDNLVSVIEKQTNKKVRILEIKPLKSSQD CEEHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCC LKMVVIEDPDTKYNIPLVVSKDGNLVIGLSNIFFSNKSEDVQLVAETNQKVQALNATQQN EEEEEEECCCCCCCCEEEEECCCCEEEEEHHEEECCCCCCEEEEECCCCHHHHHCCCCCC SAKLNAIFNEIPADYAIELPSTNAANKDKILYIVSDPMCPHCQKELTKLRDHLKENTVRM CHHHHHHHHHCCCCEEEECCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHCCEEE VVVGWLGVNSAKKAALIQEEMAKARARGASVEDKISILEKIYSTQYDINAQKEPEDLRTK EEEEEECCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHH VENTTKKIFESGVIKGVPFLYHYKA HHHHHHHHHHCCCCCCCCEEEEECC >Mature Secondary Structure MILRASVLSALLLVSLGAAPKHSVSANDKRMQDNLVSVIEKQTNKKVRILEIKPLKSSQD CEEHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCC LKMVVIEDPDTKYNIPLVVSKDGNLVIGLSNIFFSNKSEDVQLVAETNQKVQALNATQQN EEEEEEECCCCCCCCEEEEECCCCEEEEEHHEEECCCCCCEEEEECCCCHHHHHCCCCCC SAKLNAIFNEIPADYAIELPSTNAANKDKILYIVSDPMCPHCQKELTKLRDHLKENTVRM CHHHHHHHHHCCCCEEEECCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHCCEEE VVVGWLGVNSAKKAALIQEEMAKARARGASVEDKISILEKIYSTQYDINAQKEPEDLRTK EEEEEECCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHH VENTTKKIFESGVIKGVPFLYHYKA HHHHHHHHHHCCCCCCCCEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA