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The map label for this gene is ybaR [H]

Identifier: 108562656

GI number: 108562656

Start: 234724

End: 235881

Strand: Direct

Name: ybaR [H]

Synonym: HPAG1_0231

Alternate gene names: 108562656

Gene position: 234724-235881 (Clockwise)

Preceding gene: 108562652

Following gene: 108562659

Centisome position: 14.7

GC content: 41.62

Gene sequence:

>1158_bases
ATGTTTGAAAAGATACAAAAAGAATGGCTGAGCAACATTCAAAAGGATTTGTTGTCTGGTTTTGTGGTGGGGCTTTCTGT
GATCCCAGAGACGGCCGGCTTTGCGATCATGGTGGGTTTAGATGTGGGCGTGGCGTTTTATACGACCTTTTACATGGCTT
TTGTTTTGTCTTTTTTTGGGGCTAGAAAGGCGATGATTAGCGCAGCAGCCGGCTCAGTGGCGCTCATTTTAGTGGGCGTG
GTTAAAAACTATGGGCTTGAATACGCGGGTGTGGCGACTCTTATGGCAGGAATATTGCAAATTCTTTTAGGCTATTTGAA
AATAGGGAATCTTTTGAGGTTTATCCCCCAATCGGTGATGTATGGCTTTGTGAACGCGCTAGGCATTTTGCTGTTAATGG
AGCAATTCAAATTCCTTCAAAACCAAAATTTGGGGGTGTTTATCTTGCTTGTTATTGGGATATTGATTATTTACCTCTTC
CCCTTAATCACTAAAAAAATCCCCTCTAATCTGATTTGTATCCTTATAGTGAGCGCGATCGCTTTAATTTTTGACACGCA
TGCGCCGAATTTAGGGAGCATTGAGCAAGGGGTTTCAGGCTTTCATTTTCTTATCATCCCCAAAAATTTGGATTTTAAAA
TCGTTATAGAATTGTTGCCTTACGCTCTTTCTTTAGCGCTAGTAGGCACGATAGAAAGCTTATTGACCGCCAAAACTTTA
GATGTTATTTTAAAAGACGGCGTGAGCGATAAAAATAAAGAAACTAAAGCGCAAGGCTTGGGGAATATCGTCTCAGGGCT
TTTGGGGGGAATGACAGGGTGCGCTTTAGTGGGGCAGTCTATCATCAACGCAAAATCCGGGGCTAAAACAAGGCTTTCTA
CTTTTTTTGCCGGCTTTTCTTTAATGGTGCTAATATTAGTGTTTAATGAATACGTGGTTAAGATCCCCATTGTAGCGGTT
GTGGCGGTGATGGTGATGATTTCTTTCACCACTTTTAATTTCCAATCCATTATTAATATTAAAACAATCAAGCCCTATGA
CACGCTCAACATGCTCTTAGTCGTGGCGGTGGTTTTATACACGCATAATTTAGCGATAGGGGTTGTGGTGGGGGTTTTAG
TCAATGCGTTATGGATCAAATCAAAAGGGATTGCGTGA

Upstream 100 bases:

>100_bases
ATAAAATATTTAAAAAAGCTTAACGCTAAGAAAAATTTTATTGGTTTGAAATTGGTTTTTAAATCTTATAATCAAGCCAT
TCCAATTAAGAAAGAAAGGC

Downstream 100 bases:

>100_bases
AATTTTGCTATATGCTATAAAAAAGAAAAAGATGAGTTAAAAGTATGGCTCCAGATGTAGGATTCGAACCTACGACCAAG
CGGTTAACAGCCGCCTACTC

Product: hypothetical protein

Products: Proton [Cytoplasm]; SO42- [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 385; Mature: 385

Protein sequence:

>385_residues
MFEKIQKEWLSNIQKDLLSGFVVGLSVIPETAGFAIMVGLDVGVAFYTTFYMAFVLSFFGARKAMISAAAGSVALILVGV
VKNYGLEYAGVATLMAGILQILLGYLKIGNLLRFIPQSVMYGFVNALGILLLMEQFKFLQNQNLGVFILLVIGILIIYLF
PLITKKIPSNLICILIVSAIALIFDTHAPNLGSIEQGVSGFHFLIIPKNLDFKIVIELLPYALSLALVGTIESLLTAKTL
DVILKDGVSDKNKETKAQGLGNIVSGLLGGMTGCALVGQSIINAKSGAKTRLSTFFAGFSLMVLILVFNEYVVKIPIVAV
VAVMVMISFTTFNFQSIINIKTIKPYDTLNMLLVVAVVLYTHNLAIGVVVGVLVNALWIKSKGIA

Sequences:

>Translated_385_residues
MFEKIQKEWLSNIQKDLLSGFVVGLSVIPETAGFAIMVGLDVGVAFYTTFYMAFVLSFFGARKAMISAAAGSVALILVGV
VKNYGLEYAGVATLMAGILQILLGYLKIGNLLRFIPQSVMYGFVNALGILLLMEQFKFLQNQNLGVFILLVIGILIIYLF
PLITKKIPSNLICILIVSAIALIFDTHAPNLGSIEQGVSGFHFLIIPKNLDFKIVIELLPYALSLALVGTIESLLTAKTL
DVILKDGVSDKNKETKAQGLGNIVSGLLGGMTGCALVGQSIINAKSGAKTRLSTFFAGFSLMVLILVFNEYVVKIPIVAV
VAVMVMISFTTFNFQSIINIKTIKPYDTLNMLLVVAVVLYTHNLAIGVVVGVLVNALWIKSKGIA
>Mature_385_residues
MFEKIQKEWLSNIQKDLLSGFVVGLSVIPETAGFAIMVGLDVGVAFYTTFYMAFVLSFFGARKAMISAAAGSVALILVGV
VKNYGLEYAGVATLMAGILQILLGYLKIGNLLRFIPQSVMYGFVNALGILLLMEQFKFLQNQNLGVFILLVIGILIIYLF
PLITKKIPSNLICILIVSAIALIFDTHAPNLGSIEQGVSGFHFLIIPKNLDFKIVIELLPYALSLALVGTIESLLTAKTL
DVILKDGVSDKNKETKAQGLGNIVSGLLGGMTGCALVGQSIINAKSGAKTRLSTFFAGFSLMVLILVFNEYVVKIPIVAV
VAVMVMISFTTFNFQSIINIKTIKPYDTLNMLLVVAVVLYTHNLAIGVVVGVLVNALWIKSKGIA

Specific function: Possible Sulfate Transporter. [C]

COG id: COG0659

COG function: function code P; Sulfate permease and related transporters (MFS superfamily)

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 STAS domain [H]

Homologues:

Organism=Escherichia coli, GI87081859, Length=417, Percent_Identity=26.1390887290168, Blast_Score=113, Evalue=2e-26,
Organism=Drosophila melanogaster, GI21358633, Length=421, Percent_Identity=21.6152019002375, Blast_Score=70, Evalue=2e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR018045
- InterPro:   IPR002645
- InterPro:   IPR001902
- InterPro:   IPR011547 [H]

Pfam domain/function: PF01740 STAS; PF00916 Sulfate_transp [H]

EC number: NA

Molecular weight: Translated: 41495; Mature: 41495

Theoretical pI: Translated: 9.74; Mature: 9.74

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFEKIQKEWLSNIQKDLLSGFVVGLSVIPETAGFAIMVGLDVGVAFYTTFYMAFVLSFFG
CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHH
ARKAMISAAAGSVALILVGVVKNYGLEYAGVATLMAGILQILLGYLKIGNLLRFIPQSVM
HHHHHHHHHCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YGFVNALGILLLMEQFKFLQNQNLGVFILLVIGILIIYLFPLITKKIPSNLICILIVSAI
HHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH
ALIFDTHAPNLGSIEQGVSGFHFLIIPKNLDFKIVIELLPYALSLALVGTIESLLTAKTL
HHHHHCCCCCCCCHHHCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DVILKDGVSDKNKETKAQGLGNIVSGLLGGMTGCALVGQSIINAKSGAKTRLSTFFAGFS
HHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHH
LMVLILVFNEYVVKIPIVAVVAVMVMISFTTFNFQSIINIKTIKPYDTLNMLLVVAVVLY
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHEEEEEECCHHHHHHHHHHHHHHH
THNLAIGVVVGVLVNALWIKSKGIA
HHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MFEKIQKEWLSNIQKDLLSGFVVGLSVIPETAGFAIMVGLDVGVAFYTTFYMAFVLSFFG
CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHH
ARKAMISAAAGSVALILVGVVKNYGLEYAGVATLMAGILQILLGYLKIGNLLRFIPQSVM
HHHHHHHHHCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YGFVNALGILLLMEQFKFLQNQNLGVFILLVIGILIIYLFPLITKKIPSNLICILIVSAI
HHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH
ALIFDTHAPNLGSIEQGVSGFHFLIIPKNLDFKIVIELLPYALSLALVGTIESLLTAKTL
HHHHHCCCCCCCCHHHCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DVILKDGVSDKNKETKAQGLGNIVSGLLGGMTGCALVGQSIINAKSGAKTRLSTFFAGFS
HHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHH
LMVLILVFNEYVVKIPIVAVVAVMVMISFTTFNFQSIINIKTIKPYDTLNMLLVVAVVLY
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHEEEEEECCHHHHHHHHHHHHHHH
THNLAIGVVVGVLVNALWIKSKGIA
HHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: Proton [Periplasm]; SO42- [Periplasm] [C]

Specific reaction: Proton [Periplasm] + SO42- [Periplasm] = Proton [Cytoplasm] + SO42- [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9274029; 9384377 [H]