Definition Helicobacter pylori HPAG1 chromosome, complete genome.
Accession NC_008086
Length 1,596,366

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The map label for this gene is 108562649

Identifier: 108562649

GI number: 108562649

Start: 228065

End: 228298

Strand: Direct

Name: 108562649

Synonym: HPAG1_0224

Alternate gene names: NA

Gene position: 228065-228298 (Clockwise)

Preceding gene: 108562648

Following gene: 108562650

Centisome position: 14.29

GC content: 35.9

Gene sequence:

>234_bases
ATGGAAAAGACAGAAAACACAGATGAAACTCGCTTAAGGGGAACTAAAAATAAACTAGGACGCAAACCAAAAGCAGACGC
TAATAAAAAAACTCGTGCTGTGAGTTTGTATTTTTCTGATGAGCAATACCAAAAACTAGAGAAAATGGCTAACGAAGAAG
AAGAAAGCGTGGGATCTTATATCAAACGCTATATTTTGAAGGCTTTAAGAAAAATAGAGCAAAATGGCGCTTGA

Upstream 100 bases:

>100_bases
AATGAGGAATGATTAGCACTTGCAACATTATTCATTATACGCTACTTTTATGCTAACATGCTATTTTGAAGCGATTTGCG
ATGATGATTGAAGGAACTTG

Downstream 100 bases:

>100_bases
TAACTTTTTAACTTGTTTTGAGTGTAGCTTTACGAGTTTTGCTTTTGCTATAGAACAAAACCAAAACCCCATTTTTATCT
GGTCTTTAGCTGTGTGATTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 77; Mature: 77

Protein sequence:

>77_residues
MEKTENTDETRLRGTKNKLGRKPKADANKKTRAVSLYFSDEQYQKLEKMANEEEESVGSYIKRYILKALRKIEQNGA

Sequences:

>Translated_77_residues
MEKTENTDETRLRGTKNKLGRKPKADANKKTRAVSLYFSDEQYQKLEKMANEEEESVGSYIKRYILKALRKIEQNGA
>Mature_77_residues
MEKTENTDETRLRGTKNKLGRKPKADANKKTRAVSLYFSDEQYQKLEKMANEEEESVGSYIKRYILKALRKIEQNGA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 8969; Mature: 8969

Theoretical pI: Translated: 10.10; Mature: 10.10

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEKTENTDETRLRGTKNKLGRKPKADANKKTRAVSLYFSDEQYQKLEKMANEEEESVGSY
CCCCCCCCHHHHCCCHHHHCCCCCCCCCCCCCEEEEEECCHHHHHHHHHHCCHHHHHHHH
IKRYILKALRKIEQNGA
HHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MEKTENTDETRLRGTKNKLGRKPKADANKKTRAVSLYFSDEQYQKLEKMANEEEESVGSY
CCCCCCCCHHHHCCCHHHHCCCCCCCCCCCCCEEEEEECCHHHHHHHHHHCCHHHHHHHH
IKRYILKALRKIEQNGA
HHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA