| Definition | Helicobacter pylori HPAG1 chromosome, complete genome. |
|---|---|
| Accession | NC_008086 |
| Length | 1,596,366 |
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The map label for this gene is 108562578
Identifier: 108562578
GI number: 108562578
Start: 160909
End: 161184
Strand: Direct
Name: 108562578
Synonym: HPAG1_0153
Alternate gene names: NA
Gene position: 160909-161184 (Clockwise)
Preceding gene: 108562577
Following gene: 108562579
Centisome position: 10.08
GC content: 38.41
Gene sequence:
>276_bases ATGGCTAGTGGCCTTTTTGAAAACGATGGAATCAAAGAAAACAAAGTGCGAGATTTTTTCTATAGCCATAGCTCCCTTAT TGTCTTTTTCCTCTTACTGCTTGGGTTTGGGTATTATTTAGGGAAGTTGCTTTTTGGGGGCTCTTCTTTAGAAGTTTATT TGGATTTAAGAGACAAGCATGAACGATTGCAACAAGAAATCACCGAATTGCAAAGCAAGAATGTGCGTTTGCAAAAGCGT TTGTTTGAGTTGAAGGAATTACGGCCTAGAGATTAG
Upstream 100 bases:
>100_bases TCCACCGCAAGGAGTGAAAGGATCGCTAAATACAACCGCCTTTTAGAGATTGAGCATGAATTAAAAGGGGGGATTTATAT CGGTAAAGAGTTGTTTAAGC
Downstream 100 bases:
>100_bases ATTTAAGGAAAATGGTAGTGTTAAAAAAGATGATAGGTTTGGTGGTGGTTTTAAGCGTTTTATGGGCTAGAGACAACCCT TTTGAGTCTGAAATCAATTC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 91; Mature: 90
Protein sequence:
>91_residues MASGLFENDGIKENKVRDFFYSHSSLIVFFLLLLGFGYYLGKLLFGGSSLEVYLDLRDKHERLQQEITELQSKNVRLQKR LFELKELRPRD
Sequences:
>Translated_91_residues MASGLFENDGIKENKVRDFFYSHSSLIVFFLLLLGFGYYLGKLLFGGSSLEVYLDLRDKHERLQQEITELQSKNVRLQKR LFELKELRPRD >Mature_90_residues ASGLFENDGIKENKVRDFFYSHSSLIVFFLLLLGFGYYLGKLLFGGSSLEVYLDLRDKHERLQQEITELQSKNVRLQKRL FELKELRPRD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 10759; Mature: 10627
Theoretical pI: Translated: 8.91; Mature: 8.91
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MASGLFENDGIKENKVRDFFYSHSSLIVFFLLLLGFGYYLGKLLFGGSSLEVYLDLRDKH CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECHHHH ERLQQEITELQSKNVRLQKRLFELKELRPRD HHHHHHHHHHHHCCHHHHHHHHHHHHCCCCC >Mature Secondary Structure ASGLFENDGIKENKVRDFFYSHSSLIVFFLLLLGFGYYLGKLLFGGSSLEVYLDLRDKH CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECHHHH ERLQQEITELQSKNVRLQKRLFELKELRPRD HHHHHHHHHHHHCCHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA