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The map label for this gene is fixN [H]

Identifier: 108562567

GI number: 108562567

Start: 151982

End: 153448

Strand: Direct

Name: fixN [H]

Synonym: HPAG1_0142

Alternate gene names: 108562567

Gene position: 151982-153448 (Clockwise)

Preceding gene: 108562564

Following gene: 108562568

Centisome position: 9.52

GC content: 42.06

Gene sequence:

>1467_bases
ATGCAAGAAAATGTGCCTTTGAGTTATGATTATTCCATTAGCAAATTGTTTCTTTATGCGATGGTTGCATTTGGGATAAT
AGGCATGTTAATAGGGATCGTATTAGCCTTTGAATTGTCTTTCCCTAACTTGAATTACATTGCAGGGGAGTATGGCGTTT
TTGGCCGCTTACGCCCCTTACACACGAATGCGGTGATCTATGGTTTCACTCTTGGGGGGATTTGGGCGAGTTGGTATTAT
ATCGGTCAAAGGGTGCTTAAAATCACTTATTACCAACACCCCTTTTTGAAAATTGTAGGGTTATTGCATTTTTGGCTCTG
GATTATCCTTTTAATTCTAGGGGTTATTAGCTTGTTTGCTGGTCTTACTCAATCTAAAGAATACGCCGAATTGATGTGGC
CTTTAGATATTATTGTGGTTGTGGCATGGGTGCTATGGGGGGTTAATATGTTTGGGAGCATGAGCGTTAGGAGAGAAAAT
ACTATTTACGTGTCTTTATGGTATTACATCGCTACTTATGTGGGTATAGCGGTGATGTATATCTTCAATAACCTTTCTGT
CCCCACCTATTTTGTCGCTGATATGGGGAGTGTTTGGCATTCTATTTCTATGTATTCAGGCAGTAATGATGCACTCATTC
AATGGTGGTGGGGGCATAATGCGGTCGCTTTTGTCTTTACGAGTGGGGTGATTGGCACGATTTATTATTTCTTGCCTAAA
GAGAGCGGCCAGCCTATCTTTTCTTACAAACTCACTTTGTTTTCTTTCTGGAGCTTGATGTTTGTTTATATTTGGGCAGG
CGGGCACCATTTGATTTATTCCACCGTTCCTGATTGGGTGCAAACCCTTTCTAGCGTGTTTTCAGTGGTGTTGATCTTGC
CTTCGTGGGGGACAGCCATTAACATGCTTTTAACGATGAGGGGCCAATGGCACCAGCTCAAAGAAAGCCCTTTGATTAAA
TTCTTAGTTTTAGCTTCAACTTTCTACATGCTTTCCACTTTAGAAGGCTCTATTCAAGCCATCAAGAGCGTGAACGCTTT
AGCGCACTTCACCGATTGGATTGTAGGGCATGTGCATGACGGCGTGCTTGGGTGGGTAGGCTTCACTTTGATTGCGAGCA
TGTATCACATGACGCCTAGGCTTTTCAAAAGAGAGATTTATTCAGGCAGGCTTGTGGATTTCCAATTTTGGATCATGACT
TTAGGGATTGTACTTTACTTTTCGTCCATGTGGATTGCAGGGATCACGCAAGGGATGATGTGGAGGGATGTGGATCAGTA
TGGGAATCTCACTTACCAGTTCATTGACACGGTTAAGGTGCTAATCCCTTATTACAATATTAGAGGCGTTGGGGGTCTTA
TGTATTTTATTGGATTTATTATTTTTGCTTACAATATTTTTATGACCATCACGGCAGGCAAAAAATTAGAGCGTGAGCCC
AATTACGCCACGCCTATGTCTCGATAG

Upstream 100 bases:

>100_bases
CAATGTTACAGAAAAAGATTAAAAATTAAGCTTTTTGAAAAAGATAAAATTTTATAATTATGTTTATCTTTGTTGAATTT
ACTACAAATAGGAGTATTGC

Downstream 100 bases:

>100_bases
GGGAGGTTGGAAATGTTTAGTTTTTTAGAGAAAAACCCGTTCTTTTTCACGCTTGCGTTTATTTTTGTGTTTGCGATCGC
GGGCTTGGTGGAGATTTTGC

Product: cbb3-type cytochrome c oxidase subunit I

Products: NA

Alternate protein names: Cytochrome CBB3 subunit 1; Cytochrome c oxidase polypeptide I homolog; Heme B/copper cytochrome c oxidase subunit [H]

Number of amino acids: Translated: 488; Mature: 488

Protein sequence:

>488_residues
MQENVPLSYDYSISKLFLYAMVAFGIIGMLIGIVLAFELSFPNLNYIAGEYGVFGRLRPLHTNAVIYGFTLGGIWASWYY
IGQRVLKITYYQHPFLKIVGLLHFWLWIILLILGVISLFAGLTQSKEYAELMWPLDIIVVVAWVLWGVNMFGSMSVRREN
TIYVSLWYYIATYVGIAVMYIFNNLSVPTYFVADMGSVWHSISMYSGSNDALIQWWWGHNAVAFVFTSGVIGTIYYFLPK
ESGQPIFSYKLTLFSFWSLMFVYIWAGGHHLIYSTVPDWVQTLSSVFSVVLILPSWGTAINMLLTMRGQWHQLKESPLIK
FLVLASTFYMLSTLEGSIQAIKSVNALAHFTDWIVGHVHDGVLGWVGFTLIASMYHMTPRLFKREIYSGRLVDFQFWIMT
LGIVLYFSSMWIAGITQGMMWRDVDQYGNLTYQFIDTVKVLIPYYNIRGVGGLMYFIGFIIFAYNIFMTITAGKKLEREP
NYATPMSR

Sequences:

>Translated_488_residues
MQENVPLSYDYSISKLFLYAMVAFGIIGMLIGIVLAFELSFPNLNYIAGEYGVFGRLRPLHTNAVIYGFTLGGIWASWYY
IGQRVLKITYYQHPFLKIVGLLHFWLWIILLILGVISLFAGLTQSKEYAELMWPLDIIVVVAWVLWGVNMFGSMSVRREN
TIYVSLWYYIATYVGIAVMYIFNNLSVPTYFVADMGSVWHSISMYSGSNDALIQWWWGHNAVAFVFTSGVIGTIYYFLPK
ESGQPIFSYKLTLFSFWSLMFVYIWAGGHHLIYSTVPDWVQTLSSVFSVVLILPSWGTAINMLLTMRGQWHQLKESPLIK
FLVLASTFYMLSTLEGSIQAIKSVNALAHFTDWIVGHVHDGVLGWVGFTLIASMYHMTPRLFKREIYSGRLVDFQFWIMT
LGIVLYFSSMWIAGITQGMMWRDVDQYGNLTYQFIDTVKVLIPYYNIRGVGGLMYFIGFIIFAYNIFMTITAGKKLEREP
NYATPMSR
>Mature_488_residues
MQENVPLSYDYSISKLFLYAMVAFGIIGMLIGIVLAFELSFPNLNYIAGEYGVFGRLRPLHTNAVIYGFTLGGIWASWYY
IGQRVLKITYYQHPFLKIVGLLHFWLWIILLILGVISLFAGLTQSKEYAELMWPLDIIVVVAWVLWGVNMFGSMSVRREN
TIYVSLWYYIATYVGIAVMYIFNNLSVPTYFVADMGSVWHSISMYSGSNDALIQWWWGHNAVAFVFTSGVIGTIYYFLPK
ESGQPIFSYKLTLFSFWSLMFVYIWAGGHHLIYSTVPDWVQTLSSVFSVVLILPSWGTAINMLLTMRGQWHQLKESPLIK
FLVLASTFYMLSTLEGSIQAIKSVNALAHFTDWIVGHVHDGVLGWVGFTLIASMYHMTPRLFKREIYSGRLVDFQFWIMT
LGIVLYFSSMWIAGITQGMMWRDVDQYGNLTYQFIDTVKVLIPYYNIRGVGGLMYFIGFIIFAYNIFMTITAGKKLEREP
NYATPMSR

Specific function: Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. Co I is the catalytic subunit of the enzyme. Electrons originating in cytochrome

COG id: COG3278

COG function: function code O; Cbb3-type cytochrome oxidase, subunit 1

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the heme-copper respiratory oxidase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004677
- InterPro:   IPR000883 [H]

Pfam domain/function: PF00115 COX1 [H]

EC number: =1.9.3.1 [H]

Molecular weight: Translated: 56085; Mature: 56085

Theoretical pI: Translated: 8.94; Mature: 8.94

Prosite motif: PS50855 COX1 ; PS00077 COX1_CUB

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.5 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.5 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQENVPLSYDYSISKLFLYAMVAFGIIGMLIGIVLAFELSFPNLNYIAGEYGVFGRLRPL
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEECCCCCCCCCCCEE
HTNAVIYGFTLGGIWASWYYIGQRVLKITYYQHPFLKIVGLLHFWLWIILLILGVISLFA
ECCEEEEEEEHHHHHHHHHHHHHHHHHEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
GLTQSKEYAELMWPLDIIVVVAWVLWGVNMFGSMSVRRENTIYVSLWYYIATYVGIAVMY
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCEEEEEHHHHHHHHHHHHHHH
IFNNLSVPTYFVADMGSVWHSISMYSGSNDALIQWWWGHNAVAFVFTSGVIGTIYYFLPK
HHHCCCCCHHHHHHHHHHHHHHHEECCCCCCEEEEEECCCEEEEEEHHHHHHHHHEEEEC
ESGQPIFSYKLTLFSFWSLMFVYIWAGGHHLIYSTVPDWVQTLSSVFSVVLILPSWGTAI
CCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEECCHHHHHHHHHHHHHHHHHHCCCHHHH
NMLLTMRGQWHQLKESPLIKFLVLASTFYMLSTLEGSIQAIKSVNALAHFTDWIVGHVHD
HHHHHCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
GVLGWVGFTLIASMYHMTPRLFKREIYSGRLVDFQFWIMTLGIVLYFSSMWIAGITQGMM
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHCHH
WRDVDQYGNLTYQFIDTVKVLIPYYNIRGVGGLMYFIGFIIFAYNIFMTITAGKKLEREP
HHHHHHHCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHEEECCCCCCCCC
NYATPMSR
CCCCCCCC
>Mature Secondary Structure
MQENVPLSYDYSISKLFLYAMVAFGIIGMLIGIVLAFELSFPNLNYIAGEYGVFGRLRPL
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEECCCCCCCCCCCEE
HTNAVIYGFTLGGIWASWYYIGQRVLKITYYQHPFLKIVGLLHFWLWIILLILGVISLFA
ECCEEEEEEEHHHHHHHHHHHHHHHHHEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
GLTQSKEYAELMWPLDIIVVVAWVLWGVNMFGSMSVRRENTIYVSLWYYIATYVGIAVMY
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCEEEEEHHHHHHHHHHHHHHH
IFNNLSVPTYFVADMGSVWHSISMYSGSNDALIQWWWGHNAVAFVFTSGVIGTIYYFLPK
HHHCCCCCHHHHHHHHHHHHHHHEECCCCCCEEEEEECCCEEEEEEHHHHHHHHHEEEEC
ESGQPIFSYKLTLFSFWSLMFVYIWAGGHHLIYSTVPDWVQTLSSVFSVVLILPSWGTAI
CCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEECCHHHHHHHHHHHHHHHHHHCCCHHHH
NMLLTMRGQWHQLKESPLIKFLVLASTFYMLSTLEGSIQAIKSVNALAHFTDWIVGHVHD
HHHHHCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
GVLGWVGFTLIASMYHMTPRLFKREIYSGRLVDFQFWIMTLGIVLYFSSMWIAGITQGMM
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHCHH
WRDVDQYGNLTYQFIDTVKVLIPYYNIRGVGGLMYFIGFIIFAYNIFMTITAGKKLEREP
HHHHHHHCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHEEECCCCCCCCC
NYATPMSR
CCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 11481432 [H]