Definition Burkholderia cenocepacia AU 1054 chromosome 1, complete sequence.
Accession NC_008060
Length 3,294,563

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The map label for this gene is xylY [H]

Identifier: 107022857

GI number: 107022857

Start: 1435314

End: 1435688

Strand: Reverse

Name: xylY [H]

Synonym: Bcen_1305

Alternate gene names: 107022857

Gene position: 1435688-1435314 (Counterclockwise)

Preceding gene: 107022858

Following gene: 107022856

Centisome position: 43.58

GC content: 63.2

Gene sequence:

>375_bases
ATGCCCGCATGGGACGACGATGACCGGCCGACCGACGATCCGCGCAGCGAGATCTCGCTGATGTATTACGCGGATCGCGG
CGGCCTCGAGGATCGCGTGTTCCGGATCAAGACCGAGCGCAGCGGCGCATCGACGCCCGAGCCGCGCACCAGCCACAACG
TGACGAACGTCGAGGTGCTGGCCGAACGCGACGACGAGGTCGACGTGCGCTACAACTTTCACACGCTGAACCACCGTTAC
CGCGTGACCGATCACTTCTTCGGCACGATGTTCGTCACGTTGCGCCGCGCGGGCGACGCGCTGCTGATTTCGCACAAGAA
GATCGTGCTGAAGAACGACTACATCCGGCAGGTGCTCGACGTCTATCACGTCTGA

Upstream 100 bases:

>100_bases
CCGGACGATTTGCGCGGCGCTGTATCGCGAGGCGCGCCTGCTCGACGATCGCGAGTGGGACGCGTGACTGACCTGCTACA
CGGAAGACGTCACGTATTGG

Downstream 100 bases:

>100_bases
TGCCGTTGGTTTGCCATGAAAGGAAGTGGAGGTGACGCGATGTCCAGCTACAAGATTGCATTGAATTTCGAGGACGGGGT
GACCCGCTTCATCGACTGCA

Product: 2-chlorobenzoate 1,2-dioxygenase

Products: 1,2-dihydroxycyclohexa-3,5-diene-1-carboxylate; NAD+

Alternate protein names: NA

Number of amino acids: Translated: 124; Mature: 123

Protein sequence:

>124_residues
MPAWDDDDRPTDDPRSEISLMYYADRGGLEDRVFRIKTERSGASTPEPRTSHNVTNVEVLAERDDEVDVRYNFHTLNHRY
RVTDHFFGTMFVTLRRAGDALLISHKKIVLKNDYIRQVLDVYHV

Sequences:

>Translated_124_residues
MPAWDDDDRPTDDPRSEISLMYYADRGGLEDRVFRIKTERSGASTPEPRTSHNVTNVEVLAERDDEVDVRYNFHTLNHRY
RVTDHFFGTMFVTLRRAGDALLISHKKIVLKNDYIRQVLDVYHV
>Mature_123_residues
PAWDDDDRPTDDPRSEISLMYYADRGGLEDRVFRIKTERSGASTPEPRTSHNVTNVEVLAERDDEVDVRYNFHTLNHRYR
VTDHFFGTMFVTLRRAGDALLISHKKIVLKNDYIRQVLDVYHV

Specific function: Unknown

COG id: COG5517

COG function: function code Q; Small subunit of phenylpropionate dioxygenase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial ring-hydroxylating dioxygenase beta subunit family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017641
- InterPro:   IPR000391 [H]

Pfam domain/function: PF00866 Ring_hydroxyl_B [H]

EC number: 1.14.12.10

Molecular weight: Translated: 14567; Mature: 14436

Theoretical pI: Translated: 6.24; Mature: 6.24

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPAWDDDDRPTDDPRSEISLMYYADRGGLEDRVFRIKTERSGASTPEPRTSHNVTNVEVL
CCCCCCCCCCCCCCCCEEEEEEEECCCCCCCEEEEEEECCCCCCCCCCCCCCCCCEEEEE
AERDDEVDVRYNFHTLNHRYRVTDHFFGTMFVTLRRAGDALLISHKKIVLKNDYIRQVLD
ECCCCCEEEEEEEEECCCEEEECHHHHHHHHHHHHHCCCEEEEECCEEEEECHHHHHHHH
VYHV
HHCC
>Mature Secondary Structure 
PAWDDDDRPTDDPRSEISLMYYADRGGLEDRVFRIKTERSGASTPEPRTSHNVTNVEVL
CCCCCCCCCCCCCCCEEEEEEEECCCCCCCEEEEEEECCCCCCCCCCCCCCCCCEEEEE
AERDDEVDVRYNFHTLNHRYRVTDHFFGTMFVTLRRAGDALLISHKKIVLKNDYIRQVLD
ECCCCCEEEEEEEEECCCEEEECHHHHHHHHHHHHHCCCEEEEECCEEEEECHHHHHHHH
VYHV
HHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: benzoate; NADH; H+; O2

Specific reaction: benzoate + NADH + H+ + O2 = 1,2-dihydroxycyclohexa-3,5-diene-1-carboxylate + NAD+

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1938949 [H]