| Definition | Burkholderia cenocepacia AU 1054 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008060 |
| Length | 3,294,563 |
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The map label for this gene is xylY [H]
Identifier: 107022857
GI number: 107022857
Start: 1435314
End: 1435688
Strand: Reverse
Name: xylY [H]
Synonym: Bcen_1305
Alternate gene names: 107022857
Gene position: 1435688-1435314 (Counterclockwise)
Preceding gene: 107022858
Following gene: 107022856
Centisome position: 43.58
GC content: 63.2
Gene sequence:
>375_bases ATGCCCGCATGGGACGACGATGACCGGCCGACCGACGATCCGCGCAGCGAGATCTCGCTGATGTATTACGCGGATCGCGG CGGCCTCGAGGATCGCGTGTTCCGGATCAAGACCGAGCGCAGCGGCGCATCGACGCCCGAGCCGCGCACCAGCCACAACG TGACGAACGTCGAGGTGCTGGCCGAACGCGACGACGAGGTCGACGTGCGCTACAACTTTCACACGCTGAACCACCGTTAC CGCGTGACCGATCACTTCTTCGGCACGATGTTCGTCACGTTGCGCCGCGCGGGCGACGCGCTGCTGATTTCGCACAAGAA GATCGTGCTGAAGAACGACTACATCCGGCAGGTGCTCGACGTCTATCACGTCTGA
Upstream 100 bases:
>100_bases CCGGACGATTTGCGCGGCGCTGTATCGCGAGGCGCGCCTGCTCGACGATCGCGAGTGGGACGCGTGACTGACCTGCTACA CGGAAGACGTCACGTATTGG
Downstream 100 bases:
>100_bases TGCCGTTGGTTTGCCATGAAAGGAAGTGGAGGTGACGCGATGTCCAGCTACAAGATTGCATTGAATTTCGAGGACGGGGT GACCCGCTTCATCGACTGCA
Product: 2-chlorobenzoate 1,2-dioxygenase
Products: 1,2-dihydroxycyclohexa-3,5-diene-1-carboxylate; NAD+
Alternate protein names: NA
Number of amino acids: Translated: 124; Mature: 123
Protein sequence:
>124_residues MPAWDDDDRPTDDPRSEISLMYYADRGGLEDRVFRIKTERSGASTPEPRTSHNVTNVEVLAERDDEVDVRYNFHTLNHRY RVTDHFFGTMFVTLRRAGDALLISHKKIVLKNDYIRQVLDVYHV
Sequences:
>Translated_124_residues MPAWDDDDRPTDDPRSEISLMYYADRGGLEDRVFRIKTERSGASTPEPRTSHNVTNVEVLAERDDEVDVRYNFHTLNHRY RVTDHFFGTMFVTLRRAGDALLISHKKIVLKNDYIRQVLDVYHV >Mature_123_residues PAWDDDDRPTDDPRSEISLMYYADRGGLEDRVFRIKTERSGASTPEPRTSHNVTNVEVLAERDDEVDVRYNFHTLNHRYR VTDHFFGTMFVTLRRAGDALLISHKKIVLKNDYIRQVLDVYHV
Specific function: Unknown
COG id: COG5517
COG function: function code Q; Small subunit of phenylpropionate dioxygenase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the bacterial ring-hydroxylating dioxygenase beta subunit family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR017641 - InterPro: IPR000391 [H]
Pfam domain/function: PF00866 Ring_hydroxyl_B [H]
EC number: 1.14.12.10
Molecular weight: Translated: 14567; Mature: 14436
Theoretical pI: Translated: 6.24; Mature: 6.24
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPAWDDDDRPTDDPRSEISLMYYADRGGLEDRVFRIKTERSGASTPEPRTSHNVTNVEVL CCCCCCCCCCCCCCCCEEEEEEEECCCCCCCEEEEEEECCCCCCCCCCCCCCCCCEEEEE AERDDEVDVRYNFHTLNHRYRVTDHFFGTMFVTLRRAGDALLISHKKIVLKNDYIRQVLD ECCCCCEEEEEEEEECCCEEEECHHHHHHHHHHHHHCCCEEEEECCEEEEECHHHHHHHH VYHV HHCC >Mature Secondary Structure PAWDDDDRPTDDPRSEISLMYYADRGGLEDRVFRIKTERSGASTPEPRTSHNVTNVEVL CCCCCCCCCCCCCCCEEEEEEEECCCCCCCEEEEEEECCCCCCCCCCCCCCCCCEEEEE AERDDEVDVRYNFHTLNHRYRVTDHFFGTMFVTLRRAGDALLISHKKIVLKNDYIRQVLD ECCCCCEEEEEEEEECCCEEEECHHHHHHHHHHHHHCCCEEEEECCEEEEECHHHHHHHH VYHV HHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: benzoate; NADH; H+; O2
Specific reaction: benzoate + NADH + H+ + O2 = 1,2-dihydroxycyclohexa-3,5-diene-1-carboxylate + NAD+
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 1938949 [H]